| Tag |
Content |
| WERAM ID |
WERAM-Pem-0096 |
| Ensembl Protein ID |
ENSPMAP00000010023.1 |
| Gene Name |
hdac1 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
4.60e-139 |
462.5 |
10 |
320 |
|
| Organism |
Petromyzon marinus |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89
+kv+y+yd d+g+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+ ee++k+hs++yi+fl++++p+n++e+sk++++fnvg
ENSPMAP00000010023.1 10 RKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATSEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 98
589************************************************************************************** PP
class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGD..gve 176
edcPvfdgl+e+cql+tG+s+++a kLnk+++dia+nw GGlhhakkseasGfcyvnDivlailellkk+ + G+ g
ENSPMAP00000010023.1 99 EDCPVFDGLYEFCQLSTGGSVAGAVKLNKQQTDIAVNWGGGLHHAKKSEASGFCYVNDIVLAILELLKKFFSRNFC---SRNGEvlGLC 184
*******************************************************************977555554...4556544788 PP
class-1.txt 177 eafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlg 265
a + + v +s+ + P+t +d+ga+kgkyyavn+Pl+dgidDesye+ifk+viskv+e+++P+avvlqcGaDsl+gDrlg
ENSPMAP00000010023.1 185 SATAVLNNVCQLSLTLRAP-VTPTTTPQQDIGAGKGKYYAVNFPLRDGIDDESYEAIFKPVISKVMEMYQPSAVVLQCGADSLTGDRLG 272
999999*********9999.9******************************************************************** PP
class-1.txt 266 efnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
+fnl+ikgha+cv+f+ksfnlpll+lGGGGYt+rnvaRcwt+etav+l
ENSPMAP00000010023.1 273 CFNLTIKGHAKCVNFMKSFNLPLLMLGGGGYTIRNVARCWTFETAVAL 320
*********************************************987 PP
|
Protein Sequence
(Fasta) | MAFPHIGAKR KVCYYYDGDI GNYYYGQGHP MKPHRIRMTH NLLLNYGLYR KMEIYRPHKA 60
TSEEMTKYHS DDYIKFLRSI RPDNMSEYSK QMQRFNVGED CPVFDGLYEF CQLSTGGSVA 120
GAVKLNKQQT DIAVNWGGGL HHAKKSEASG FCYVNDIVLA ILELLKKFFS RNFCSRNGEV 180
LGLCSATAVL NNVCQLSLTL RAPVTPTTTP QQDIGAGKGK YYAVNFPLRD GIDDESYEAI 240
FKPVISKVME MYQPSAVVLQ CGADSLTGDR LGCFNLTIKG HAKCVNFMKS FNLPLLMLGG 300
GGYTIRNVAR CWTFETAVAL DSDIANELPY NDYFEYFGPD FKLHISPSNM TNQNTPEYLE 360
KIKQRLFENL RMLPHAPGVQ MQAIPEDAVP EDSGEEEEDP NKRISRTTQV RASDKRIACD 420
EEFSDSEDEG EGGRRNATNY KKIKRPKVEE EKKAEVPSAP VADERKPEPK EEEQTREPSA 480
ETGEAKGPKL EESKPSA 497Protein Fasta Sequence
>ENSPMAP00000010023.1|Class-I|Petromyzon marinus
MAFPHIGAKRKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATSEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQQTDIAVNWGGGLHHAKKSEASGFCYVNDIVLAILELLKKFFSRNFCSRNGEVLGLCSATAVLNNVCQLSLTLRAPVTPTTTPQQDIGAGKGKYYAVNFPLRDGIDDESYEAIFKPVISKVMEMYQPSAVVLQCGADSLTGDRLGCFNLTIKGHAKCVNFMKSFNLPLLMLGGGGYTIRNVARCWTFETAVALDSDIANELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAVPEDSGEEEEDPNKRISRTTQVRASDKRIACDEEFSDSEDEGEGGRRNATNYKKIKRPKVEEEKKAEVPSAPVADERKPEPKEEEQTREPSAETGEAKGPKLEESKPSA |
Nucleotide Sequence
(Fasta) | ATGGCGTTCC CTCACATCGG CGCGAAGAGA AAAGTGTGCT ATTACTACGA CGGTGACATC 60
GGAAACTACT ACTATGGACA GGGTCACCCC ATGAAGCCAC ACCGCATCCG CATGACCCAC 120
AACCTGCTGC TAAATTATGG CCTCTACCGC AAGATGGAAA TATACAGGCC GCACAAGGCC 180
ACGAGTGAGG AAATGACCAA GTACCACAGC GACGACTACA TCAAGTTTCT GCGCTCCATC 240
CGCCCGGACA ACATGTCCGA ATACAGCAAG CAGATGCAGC GCTTTAACGT GGGAGAAGAT 300
TGCCCGGTGT TTGACGGCCT TTACGAGTTT TGCCAGCTGT CCACTGGCGG CTCTGTGGCC 360
GGCGCCGTGA AGCTGAACAA GCAGCAGACG GACATTGCCG TCAACTGGGG CGGCGGGCTG 420
CACCACGCCA AGAAGTCCGA GGCCTCGGGC TTCTGCTACG TCAACGACAT CGTGCTGGCC 480
ATCCTGGAGC TGCTCAAGAA ATTTTTTTCG CGCAACTTCT GCAGCCGTAA CGGCGAGGTT 540
TTGGGCCTGT GCTCAGCCAC TGCGGTTTTA AACAACGTGT GCCAGCTCTC GCTAACCTTG 600
CGTGCACCTG TGACCCCCAC CACAACTCCA CAACAGGATA TTGGCGCCGG GAAGGGCAAG 660
TATTACGCGG TGAACTTCCC GCTGCGCGAC GGCATCGATG ACGAATCTTA CGAGGCCATC 720
TTCAAGCCGG TGATCTCCAA GGTGATGGAG ATGTACCAGC CCAGCGCCGT GGTGCTGCAG 780
TGTGGAGCCG ACTCGCTCAC CGGCGACCGA CTCGGCTGCT TCAACCTCAC CATCAAGGGC 840
CACGCCAAGT GCGTCAACTT CATGAAGAGC TTCAACTTGC CGCTGCTGAT GCTGGGCGGC 900
GGTGGCTACA CCATCCGCAA CGTGGCGCGC TGCTGGACTT TCGAGACGGC CGTGGCTCTG 960
GACAGCGACA TCGCCAACGA GCTGCCCTAT AACGACTACT TTGAGTACTT CGGGCCGGAC 1020
TTCAAGCTGC ACATCAGCCC CTCGAACATG ACCAACCAGA ACACACCCGA GTACTTGGAG 1080
AAGATCAAGC AGCGGCTGTT TGAGAACCTG CGCATGCTCC CGCACGCGCC CGGCGTGCAG 1140
ATGCAGGCCA TCCCGGAGGA CGCGGTACCC GAGGACAGCG GCGAGGAAGA GGAGGACCCC 1200
AACAAGCGAA TCTCCAGAAC AACGCAAGTC CGCGCGTCGG ACAAACGCAT CGCGTGCGAC 1260
GAGGAGTTCT CCGACTCCGA GGACGAGGGC GAGGGCGGCC GGAGGAACGC CACCAACTAC 1320
AAGAAGATCA AGCGGCCCAA GGTGGAGGAG GAGAAGAAGG CCGAGGTGCC CAGTGCCCCC 1380
GTCGCGGATG AGAGGAAGCC AGAGCCCAAA GAAGAGGAGC AGACCAGAGA ACCCAGTGCG 1440
GAGACGGGCG AAGCTAAAGG GCCCAAGCTG GAGGAGTCTA AACCGAGCGC CTGAGGGAGG 1500
AGCGTCGGGG GGGAGCAAAG GCGGTGGGTG CCGTGCGGTG GGCGTTTCCC TGTGTGCGTG 1560
CCACTCCGGT GCCCTTAAGA GGAAGGGTCC CTTACCAGTC AATAATAAAC ACCACCGCCC 1620
CACCACCACC ACTCCCACCT CC
1643Nucleotide Fasta Sequence
>ENSPMAP00000010023.1|Class-I|Petromyzon marinus
ATGGCGTTCCCTCACATCGGCGCGAAGAGAAAAGTGTGCTATTACTACGACGGTGACATCGGAAACTACTACTATGGACAGGGTCACCCCATGAAGCCACACCGCATCCGCATGACCCACAACCTGCTGCTAAATTATGGCCTCTACCGCAAGATGGAAATATACAGGCCGCACAAGGCCACGAGTGAGGAAATGACCAAGTACCACAGCGACGACTACATCAAGTTTCTGCGCTCCATCCGCCCGGACAACATGTCCGAATACAGCAAGCAGATGCAGCGCTTTAACGTGGGAGAAGATTGCCCGGTGTTTGACGGCCTTTACGAGTTTTGCCAGCTGTCCACTGGCGGCTCTGTGGCCGGCGCCGTGAAGCTGAACAAGCAGCAGACGGACATTGCCGTCAACTGGGGCGGCGGGCTGCACCACGCCAAGAAGTCCGAGGCCTCGGGCTTCTGCTACGTCAACGACATCGTGCTGGCCATCCTGGAGCTGCTCAAGAAATTTTTTTCGCGCAACTTCTGCAGCCGTAACGGCGAGGTTTTGGGCCTGTGCTCAGCCACTGCGGTTTTAAACAACGTGTGCCAGCTCTCGCTAACCTTGCGTGCACCTGTGACCCCCACCACAACTCCACAACAGGATATTGGCGCCGGGAAGGGCAAGTATTACGCGGTGAACTTCCCGCTGCGCGACGGCATCGATGACGAATCTTACGAGGCCATCTTCAAGCCGGTGATCTCCAAGGTGATGGAGATGTACCAGCCCAGCGCCGTGGTGCTGCAGTGTGGAGCCGACTCGCTCACCGGCGACCGACTCGGCTGCTTCAACCTCACCATCAAGGGCCACGCCAAGTGCGTCAACTTCATGAAGAGCTTCAACTTGCCGCTGCTGATGCTGGGCGGCGGTGGCTACACCATCCGCAACGTGGCGCGCTGCTGGACTTTCGAGACGGCCGTGGCTCTGGACAGCGACATCGCCAACGAGCTGCCCTATAACGACTACTTTGAGTACTTCGGGCCGGACTTCAAGCTGCACATCAGCCCCTCGAACATGACCAACCAGAACACACCCGAGTACTTGGAGAAGATCAAGCAGCGGCTGTTTGAGAACCTGCGCATGCTCCCGCACGCGCCCGGCGTGCAGATGCAGGCCATCCCGGAGGACGCGGTACCCGAGGACAGCGGCGAGGAAGAGGAGGACCCCAACAAGCGAATCTCCAGAACAACGCAAGTCCGCGCGTCGGACAAACGCATCGCGTGCGACGAGGAGTTCTCCGACTCCGAGGACGAGGGCGAGGGCGGCCGGAGGAACGCCACCAACTACAAGAAGATCAAGCGGCCCAAGGTGGAGGAGGAGAAGAAGGCCGAGGTGCCCAGTGCCCCCGTCGCGGATGAGAGGAAGCCAGAGCCCAAAGAAGAGGAGCAGACCAGAGAACCCAGTGCGGAGACGGGCGAAGCTAAAGGGCCCAAGCTGGAGGAGTCTAAACCGAGCGCCTGAGGGAGGAGCGTCGGGGGGGAGCAAAGGCGGTGGGTGCCGTGCGGTGGGCGTTTCCCTGTGTGCGTGCCACTCCGGTGCCCTTAAGAGGAAGGGTCCCTTACCAGTCAATAATAAACACCACCGCCCCACCACCACCACTCCCACCTCC
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
