WERAM Information

Tag Content
WERAM ID WERAM-Sot-0088
Ensembl Protein ID PGSC0003DMT400076252
Gene Name PGSC0003DMG400029646
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400029646 PGSC0003DMT400076252 PGSC0003DMT400076252
PGSC0003DMG400029646 PGSC0003DMT400076253 PGSC0003DMT400076253
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 7.10e-166 552.9 17 328
Organism Solanum tuberosum
Domain Profile
  HDAC Class-I
           class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 
                           +kv+y+yd++vg+y+ygq+hpmkp+r+++th L+ +ygl ++++++kp+ a+ ++l++fh+++yi fl++v+pe++++  ++lk+fnvg
  PGSC0003DMT400076252  17 RKVSYFYDPEVGNYYYGQGHPMKPHRMRMTHALLAHYGLLQHMHVLKPNPARDKDLCRFHADDYIAFLRSVTPETQQDQLRQLKRFNVG 105
                           589************************************************************************************** PP
           class-1.txt  90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
                           edcPvfdgl+++cq+++G+s+ +a kLn++++dia+nwaGGlhhakk+easGfcyvnDivlailellk h+rvly+did+hhGDgveea
  PGSC0003DMT400076252 106 EDCPVFDGLYSFCQTYAGGSVGGAVKLNHGHCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLYVDIDIHHGDGVEEA 194
                           ***************************************************************************************** PP
           class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
                           fyttdrvmtvsfhk+g+ +fPgtGd++d+g ++gkyy++nvPl+dgidDesy+++fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+f
  PGSC0003DMT400076252 195 FYTTDRVMTVSFHKFGD-YFPGTGDVRDIGYGSGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCF 282
                           *****************.*********************************************************************** PP
           class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                           nlsikghaecvk+++sfn+pll+lGGGGYt+rnvaRcw+yet+v+l
  PGSC0003DMT400076252 283 NLSIKGHAECVKYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVAL 328
                           *******************************************986 PP
Protein Sequence
(Fasta)		MDVGGNSLAS GADGKKRKVS YFYDPEVGNY YYGQGHPMKP HRMRMTHALL AHYGLLQHMH 60
VLKPNPARDK DLCRFHADDY IAFLRSVTPE TQQDQLRQLK RFNVGEDCPV FDGLYSFCQT 120
YAGGSVGGAV KLNHGHCDIA VNWAGGLHHA KKCEASGFCY VNDIVLAILE LLKVHERVLY 180
VDIDIHHGDG VEEAFYTTDR VMTVSFHKFG DYFPGTGDVR DIGYGSGKYY SLNVPLDDGI 240
DDESYQSLFK PIMGKVMEVF KPGAVVLQCG ADSLSGDRLG CFNLSIKGHA ECVKYMRSFN 300
VPLLLLGGGG YTIRNVARCW CYETGVALGI ELEDKMPQHE YYEYFGPDYT LHVAPSNMEN 360
KNSRQILEDI RSKLLENLSK LQHAPSVQFQ ERPPDTELPE GFGLTVRTQR LMCGLSTHYG 420
FKSYCGQSLV IKLGGGYQAD EDLEDADSRW DADSDTNGEE RKPIPSRVRR EHVEPEGKGM 480
DDMKTEEHLR EVESTFAEST SLKGGNSGST LIDGGQIKLE QGNSNKPFDQ PTDIIS 536
Nucleotide Sequence
(Fasta)		ATGGATGTTG GAGGAAACTC CTTAGCATCT GGTGCAGATG GAAAGAAGAG AAAAGTAAGT 60
TATTTCTATG ATCCTGAAGT TGGCAATTAC TATTATGGAC AAGGCCACCC AATGAAGCCA 120
CATCGAATGC GGATGACACA TGCTCTTCTT GCCCACTATG GTCTATTACA ACATATGCAT 180
GTTCTGAAGC CAAACCCTGC TAGAGATAAG GATCTCTGCA GGTTTCATGC TGATGATTAT 240
ATTGCTTTCT TGAGAAGCGT AACCCCAGAA ACACAGCAAG ATCAGCTGAG GCAGCTGAAG 300
AGATTCAACG TTGGGGAGGA CTGTCCAGTT TTTGATGGTC TTTATTCCTT CTGCCAAACC 360
TATGCTGGAG GTTCTGTTGG TGGGGCAGTG AAGTTGAACC ATGGACACTG TGATATCGCT 420
GTAAATTGGG CTGGTGGATT GCATCATGCC AAGAAATGTG AAGCATCTGG TTTCTGCTAT 480
GTGAACGATA TCGTGTTGGC TATTCTGGAG CTACTCAAAG TTCATGAGAG AGTGTTGTAT 540
GTGGATATTG ATATCCATCA TGGTGATGGC GTGGAAGAGG CCTTCTATAC CACAGATAGG 600
GTCATGACAG TTTCCTTTCA TAAATTTGGA GATTACTTTC CTGGTACAGG GGATGTACGT 660
GATATTGGTT ATGGAAGTGG AAAATACTAC TCTCTAAATG TTCCACTAGA TGATGGAATT 720
GATGATGAGA GCTATCAGTC CCTCTTTAAG CCAATTATGG GCAAAGTGAT GGAAGTTTTT 780
AAGCCTGGTG CTGTGGTCTT ACAATGTGGA GCAGATTCCT TGTCTGGTGA TAGGCTAGGC 840
TGCTTTAATC TCTCTATTAA AGGTCATGCA GAATGTGTCA AGTACATGAG GTCTTTCAAT 900
GTGCCACTGT TGTTGCTTGG TGGAGGTGGC TACACAATAC GTAATGTTGC TCGTTGCTGG 960
TGTTATGAAA CAGGAGTTGC ATTAGGAATA GAGCTTGAAG ATAAGATGCC GCAACATGAA 1020
TATTATGAAT ACTTTGGTCC AGATTATACC TTGCATGTTG CTCCAAGTAA CATGGAGAAC 1080
AAAAATTCTC GTCAGATTTT AGAAGATATA AGATCAAAGC TGCTTGAGAA TCTTTCAAAG 1140
CTTCAGCATG CCCCAAGTGT ACAGTTCCAG GAGCGACCAC CGGATACTGA ATTGCCCGAG 1200
GGCTTTGGTT TGACAGTAAG GACACAACGC CTGATGTGTG GGCTAAGCAC ACATTACGGG 1260
TTCAAATCCT ACTGTGGACA AAGCCTTGTA ATTAAGTTGG GAGGAGGGTA CCAGGCTGAT 1320
GAAGATCTAG AGGATGCAGA TTCAAGATGG GATGCTGATT CTGACACGAA TGGCGAAGAA 1380
CGTAAGCCCA TTCCTAGCAG AGTGAGGAGG GAACATGTTG AACCTGAAGG AAAAGGCATG 1440
GACGATATGA AAACAGAGGA GCACCTAAGA GAAGTAGAAT CGACATTCGC AGAGTCAACA 1500
AGTTTGAAGG GTGGCAATTC AGGTTCTACA CTGATAGATG GAGGTCAGAT TAAACTGGAA 1560
CAAGGAAACT CTAACAAGCC TTTTGATCAA CCAACTGATA TTATTTCTTG A 1612
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 92 0.0 987
WERAM-Viv-0012 VIT_03s0038g04240.t01 Vitis vinifera 78 0.0 834
WERAM-Thc-0026 EOX98961 Theobroma cacao 78 0.0 822
WERAM-Pot-0051 POPTR_0004s21950.1 Populus trichocarpa 78 0.0 814
WERAM-Glm-0156 GLYMA13G06010.3 Glycine max 76 0.0 803
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 76 0.0 792
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 76 0.0 791
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 76 0.0 790
WERAM-Prp-0056 EMJ02177 Prunus persica 76 0.0 786
WERAM-Met-0084 KEH36404 Medicago truncatula 75 0.0 773
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 75 0.0 772
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 70 0.0 764
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 72 0.0 760
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 71 0.0 759
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 72 0.0 758
WERAM-Sei-0026 Si006243m Setaria italica 72 0.0 756
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 76 0.0 754
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 70 0.0 754
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 71 0.0 753
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 79 0.0 752
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 72 0.0 751
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 85 0.0 749
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 79 0.0 743
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 72 0.0 743
WERAM-Amt-0016 ERM94967 Amborella trichopoda 88 0.0 743
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 79 0.0 731
WERAM-Aet-0051 EMT16627 Aegilops tauschii 89 0.0 725
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 70 0.0 724
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 84 0.0 719
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 71 0.0 707
WERAM-Hov-0099 MLOC_71091.1 Hordeum vulgare 89 0.0 690
WERAM-Mua-0048 GSMUA_Achr2P19590_001 Musa acuminata 62 2e-180 630
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 73 6e-175 611
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 67 9e-171 597
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 69 1e-169 593
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 69 1e-169 593
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 69 2e-169 593
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 69 2e-169 593
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 69 2e-169 593
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 69 2e-169 593
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 69 2e-169 592
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 69 2e-169 592
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 69 3e-169 592
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 69 3e-169 592
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 69 3e-169 592
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 69 3e-169 592
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 69 3e-169 592
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 68 8e-169 590
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 68 1e-168 590
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 68 1e-168 590
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 68 2e-168 589
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 68 5e-168 588
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 68 1e-167 587
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 68 1e-167 587
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 68 1e-167 586
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 68 2e-165 579
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 68 4e-165 578
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 69 5e-165 578
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 68 6e-165 578
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 69 8e-165 577
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 68 1e-164 577
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 66 2e-164 576
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 69 4e-164 575
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 69 5e-164 575
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 68 6e-164 574
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 66 9e-164 574
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 67 1e-163 573
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 68 1e-163 573
WERAM-Orla-0192 ENSORLP00000021872.1 Oryzias latipes 69 2e-163 573
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 69 2e-163 573
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 68 2e-163 572
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 68 3e-163 572
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 65 4e-163 572
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 69 7e-163 571
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 68 7e-163 571
WERAM-Xim-0229 ENSXMAP00000019038.1 Xiphophorus maculatus 68 8e-163 571
WERAM-Tru-0006 TRIUR3_03674-P1 Triticum urartu 73 1e-162 570
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 68 2e-162 570
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 68 8e-162 567
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 67 2e-160 563
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 67 5e-160 561
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 67 5e-160 561
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 67 6e-160 561
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 67 6e-160 561
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 68 5e-157 551
WERAM-Coi-0024 EAS33504 Coccidioides immitis 63 1e-155 547
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 68 1e-155 547
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 68 1e-155 547
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 62 2e-155 546
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 63 1e-154 544
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 62 2e-154 543
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 61 2e-154 543
WERAM-Cym-0014 CMJ129CT Cyanidioschyzon merolae 65 6e-154 541
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 62 9e-154 541
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 67 2e-153 540
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 63 9e-153 537
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 61 1e-152 536
WERAM-Trv-0003 EHK19072 Trichoderma virens 63 2e-152 536
WERAM-Ved-0020 EGY15146 Verticillium dahliae 60 2e-152 536
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 62 9e-152 534
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 62 9e-152 534
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 65 2e-151 533
WERAM-Cag-0003 CAG57932 Candida glabrata 61 9e-151 531
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 61 1e-150 530
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 61 2e-150 530
WERAM-Caa-0018 KGT69072 Candida albicans 59 3e-150 529
WERAM-Trr-0017 EGR48353 Trichoderma reesei 63 3e-150 529
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 61 7e-150 528
WERAM-Kop-0004 CAY67954 Komagataella pastoris 61 7e-150 528
WERAM-Asg-0034 AAS54885 Ashbya gossypii 60 9e-150 527
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 61 1e-149 527
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 62 2e-149 526
Created Date 25-Jun-2016