Tag |
Content |
WERAM ID |
WERAM-Orn-0090 |
Ensembl Protein ID |
ENSONIP00000010308.1 |
Gene Name |
hdac1 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
2.90e-176 |
585.9 |
10 |
321 |
|
Organism |
Oreochromis niloticus |
Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 kkv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+kas ee++k+hs++yi+fl++++p+n++e+sk++++fnvg ENSONIP00000010308.1 10 KKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 98 589************************************************************************************** PP class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178 edcPvfdglfe+cql++G+s+++a kLnk+++diainwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea ENSONIP00000010308.1 99 EDCPVFDGLFEFCQLSAGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187 ***************************************************************************************** PP class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267 fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+ifk+++ kv+e+++P+avvlqcGaDsl+gDrlg+f ENSONIP00000010308.1 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCF 275 *****************.*********************************************************************** PP class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313 nl+ikgha+cv+++ksfnlpll+lGGGGYt+rnvaRcwtyetav+l ENSONIP00000010308.1 276 NLTIKGHAKCVEYMKSFNLPLLMLGGGGYTIRNVARCWTYETAVAL 321 *******************************************987 PP
|
Protein Sequence (Fasta) | MALTSQGTKK KVCYYYDGDV GNYYYGQGHP MKPHRIRMTH NLLLNYGLYR KMEIYRPHKA 60 SGEEMTKYHS DDYIKFLRSI RPDNMSEYSK QMQRFNVGED CPVFDGLFEF CQLSAGGSVA 120 GAVKLNKQQT DIAINWAGGL HHAKKSEASG FCYVNDIVLA ILELLKYHQR VLYIDIDIHH 180 GDGVEEAFYT TDRVMTVSFH KYGEYFPGTG DLRDIGAGKG KYYAVNYPLR DGIDDESYEA 240 IFKPIMAKVM EMYQPSAVVL QCGADSLSGD RLGCFNLTIK GHAKCVEYMK SFNLPLLMLG 300 GGGYTIRNVA RCWTYETAVA LDSSIPNELP YNDYFEYFGP DFKLHISPSN MTNQNTNDYL 360 EKIKQRLFEN LRMLPHAPGV QMQAIPEDAV QEDSGDEEEE DPNKRVSIRS RDKRIACEEE 420 FSDSEDEGEG GRRNAASFKK VKRTKTEGEK EGEEKEKKEV KEEEKVPEEE KMDTSKPKEE 480 SKTP 484Protein Fasta Sequence
>ENSONIP00000010308.1|Class-I|Oreochromis niloticus MALTSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGYTIRNVARCWTYETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEEEDPNKRVSIRSRDKRIACEEEFSDSEDEGEGGRRNAASFKKVKRTKTEGEKEGEEKEKKEVKEEEKVPEEEKMDTSKPKEESKTP
|
Nucleotide Sequence (Fasta) | ATGGCGCTTA CTTCTCAAGG AACAAAGAAA AAAGTTTGCT ACTACTATGA TGGTGATGTT 60 GGAAACTATT ATTATGGCCA GGGGCATCCC ATGAAGCCCC ACCGAATCCG CATGACACAC 120 AACCTGTTAC TGAACTATGG CCTCTACAGA AAGATGGAAA TATACCGTCC ACACAAAGCC 180 AGTGGAGAGG AGATGACCAA GTATCACAGC GACGACTACA TCAAGTTCCT GCGTTCAATC 240 CGCCCCGATA ACATGTCAGA ATACAGCAAA CAAATGCAGA GATTTAATGT GGGGGAGGAC 300 TGTCCAGTGT TTGATGGTTT ATTTGAGTTC TGCCAGCTGT CAGCTGGGGG CTCTGTTGCC 360 GGTGCTGTGA AGTTGAACAA ACAGCAGACA GACATTGCTA TCAACTGGGC TGGAGGCCTT 420 CATCACGCCA AGAAGTCAGA AGCCTCTGGG TTTTGTTATG TCAATGACAT CGTGCTGGCT 480 ATCCTGGAGT TACTGAAATA CCACCAGAGA GTTCTGTACA TAGATATTGA CATCCATCAC 540 GGAGATGGTG TGGAAGAGGC TTTCTACACC ACAGACCGTG TCATGACCGT GTCCTTCCAC 600 AAGTATGGAG AGTACTTCCC TGGCACCGGT GACCTCAGGG ACATCGGAGC GGGAAAGGGC 660 AAATATTACG CTGTGAATTA CCCGCTGAGG GATGGGATTG ACGATGAGTC CTATGAAGCC 720 ATATTCAAGC CTATCATGGC AAAAGTGATG GAGATGTACC AACCCAGCGC GGTGGTTCTC 780 CAGTGTGGAG CTGATTCGCT GTCTGGAGAC AGGCTTGGTT GCTTTAACCT CACCATTAAA 840 GGTCATGCCA AGTGTGTGGA GTATATGAAG AGCTTCAACC TGCCACTGCT TATGCTGGGT 900 GGAGGAGGCT ACACTATCCG TAATGTGGCG CGCTGCTGGA CGTATGAGAC GGCTGTGGCC 960 CTAGATAGCT CCATCCCAAA TGAGCTTCCA TACAACGACT ACTTTGAGTA CTTTGGGCCA 1020 GACTTCAAGC TGCACATCAG CCCCTCCAAC ATGACCAATC AGAACACCAA CGACTACCTG 1080 GAGAAGATCA AGCAGCGCCT GTTTGAGAAC TTGCGGATGC TCCCTCATGC CCCTGGTGTC 1140 CAGATGCAGG CCATCCCAGA AGACGCAGTG CAGGAGGACA GCGGGGATGA GGAGGAGGAG 1200 GATCCCAACA AGCGCGTATC CATTCGTTCT CGTGACAAGA GGATAGCCTG TGAGGAGGAG 1260 TTCTCTGACT CGGAGGATGA AGGTGAAGGA GGCCGCAGAA ATGCTGCCAG CTTCAAGAAG 1320 GTCAAGCGAA CTAAAACCGA AGGAGAGAAA GAGGGAGAAG AAAAGGAGAA GAAAGAAGTC 1380 AAAGAAGAGG AGAAGGTGCC AGAGGAGGAG AAAATGGACA CATCAAAGCC AAAAGAGGAG 1440 TCCAAGACAC CTTGA
1456Nucleotide Fasta Sequence
>ENSONIP00000010308.1|Class-I|Oreochromis niloticus ATGGCGCTTACTTCTCAAGGAACAAAGAAAAAAGTTTGCTACTACTATGATGGTGATGTTGGAAACTATTATTATGGCCAGGGGCATCCCATGAAGCCCCACCGAATCCGCATGACACACAACCTGTTACTGAACTATGGCCTCTACAGAAAGATGGAAATATACCGTCCACACAAAGCCAGTGGAGAGGAGATGACCAAGTATCACAGCGACGACTACATCAAGTTCCTGCGTTCAATCCGCCCCGATAACATGTCAGAATACAGCAAACAAATGCAGAGATTTAATGTGGGGGAGGACTGTCCAGTGTTTGATGGTTTATTTGAGTTCTGCCAGCTGTCAGCTGGGGGCTCTGTTGCCGGTGCTGTGAAGTTGAACAAACAGCAGACAGACATTGCTATCAACTGGGCTGGAGGCCTTCATCACGCCAAGAAGTCAGAAGCCTCTGGGTTTTGTTATGTCAATGACATCGTGCTGGCTATCCTGGAGTTACTGAAATACCACCAGAGAGTTCTGTACATAGATATTGACATCCATCACGGAGATGGTGTGGAAGAGGCTTTCTACACCACAGACCGTGTCATGACCGTGTCCTTCCACAAGTATGGAGAGTACTTCCCTGGCACCGGTGACCTCAGGGACATCGGAGCGGGAAAGGGCAAATATTACGCTGTGAATTACCCGCTGAGGGATGGGATTGACGATGAGTCCTATGAAGCCATATTCAAGCCTATCATGGCAAAAGTGATGGAGATGTACCAACCCAGCGCGGTGGTTCTCCAGTGTGGAGCTGATTCGCTGTCTGGAGACAGGCTTGGTTGCTTTAACCTCACCATTAAAGGTCATGCCAAGTGTGTGGAGTATATGAAGAGCTTCAACCTGCCACTGCTTATGCTGGGTGGAGGAGGCTACACTATCCGTAATGTGGCGCGCTGCTGGACGTATGAGACGGCTGTGGCCCTAGATAGCTCCATCCCAAATGAGCTTCCATACAACGACTACTTTGAGTACTTTGGGCCAGACTTCAAGCTGCACATCAGCCCCTCCAACATGACCAATCAGAACACCAACGACTACCTGGAGAAGATCAAGCAGCGCCTGTTTGAGAACTTGCGGATGCTCCCTCATGCCCCTGGTGTCCAGATGCAGGCCATCCCAGAAGACGCAGTGCAGGAGGACAGCGGGGATGAGGAGGAGGAGGATCCCAACAAGCGCGTATCCATTCGTTCTCGTGACAAGAGGATAGCCTGTGAGGAGGAGTTCTCTGACTCGGAGGATGAAGGTGAAGGAGGCCGCAGAAATGCTGCCAGCTTCAAGAAGGTCAAGCGAACTAAAACCGAAGGAGAGAAAGAGGGAGAAGAAAAGGAGAAGAAAGAAGTCAAAGAAGAGGAGAAGGTGCCAGAGGAGGAGAAAATGGACACATCAAAGCCAAAAGAGGAGTCCAAGACACCTTGA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |