WERAM Information


Tag Content
WERAM ID WERAM-Orn-0090
Ensembl Protein ID ENSONIP00000010308.1
Gene Name hdac1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSONIG00000008187.1 ENSONIT00000010317.1 ENSONIP00000010308.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.90e-176 585.9 10 321
Organism Oreochromis niloticus
Domain Profile
  HDAC Class-I

           class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 
kkv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+kas ee++k+hs++yi+fl++++p+n++e+sk++++fnvg
ENSONIP00000010308.1 10 KKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 98
589************************************************************************************** PP
class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
edcPvfdglfe+cql++G+s+++a kLnk+++diainwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea
ENSONIP00000010308.1 99 EDCPVFDGLFEFCQLSAGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187
***************************************************************************************** PP
class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+ifk+++ kv+e+++P+avvlqcGaDsl+gDrlg+f
ENSONIP00000010308.1 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCF 275
*****************.*********************************************************************** PP
class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
nl+ikgha+cv+++ksfnlpll+lGGGGYt+rnvaRcwtyetav+l
ENSONIP00000010308.1 276 NLTIKGHAKCVEYMKSFNLPLLMLGGGGYTIRNVARCWTYETAVAL 321
*******************************************987 PP

Protein Sequence
(Fasta)
MALTSQGTKK KVCYYYDGDV GNYYYGQGHP MKPHRIRMTH NLLLNYGLYR KMEIYRPHKA 60
SGEEMTKYHS DDYIKFLRSI RPDNMSEYSK QMQRFNVGED CPVFDGLFEF CQLSAGGSVA 120
GAVKLNKQQT DIAINWAGGL HHAKKSEASG FCYVNDIVLA ILELLKYHQR VLYIDIDIHH 180
GDGVEEAFYT TDRVMTVSFH KYGEYFPGTG DLRDIGAGKG KYYAVNYPLR DGIDDESYEA 240
IFKPIMAKVM EMYQPSAVVL QCGADSLSGD RLGCFNLTIK GHAKCVEYMK SFNLPLLMLG 300
GGGYTIRNVA RCWTYETAVA LDSSIPNELP YNDYFEYFGP DFKLHISPSN MTNQNTNDYL 360
EKIKQRLFEN LRMLPHAPGV QMQAIPEDAV QEDSGDEEEE DPNKRVSIRS RDKRIACEEE 420
FSDSEDEGEG GRRNAASFKK VKRTKTEGEK EGEEKEKKEV KEEEKVPEEE KMDTSKPKEE 480
SKTP 484
Nucleotide Sequence
(Fasta)
ATGGCGCTTA CTTCTCAAGG AACAAAGAAA AAAGTTTGCT ACTACTATGA TGGTGATGTT 60
GGAAACTATT ATTATGGCCA GGGGCATCCC ATGAAGCCCC ACCGAATCCG CATGACACAC 120
AACCTGTTAC TGAACTATGG CCTCTACAGA AAGATGGAAA TATACCGTCC ACACAAAGCC 180
AGTGGAGAGG AGATGACCAA GTATCACAGC GACGACTACA TCAAGTTCCT GCGTTCAATC 240
CGCCCCGATA ACATGTCAGA ATACAGCAAA CAAATGCAGA GATTTAATGT GGGGGAGGAC 300
TGTCCAGTGT TTGATGGTTT ATTTGAGTTC TGCCAGCTGT CAGCTGGGGG CTCTGTTGCC 360
GGTGCTGTGA AGTTGAACAA ACAGCAGACA GACATTGCTA TCAACTGGGC TGGAGGCCTT 420
CATCACGCCA AGAAGTCAGA AGCCTCTGGG TTTTGTTATG TCAATGACAT CGTGCTGGCT 480
ATCCTGGAGT TACTGAAATA CCACCAGAGA GTTCTGTACA TAGATATTGA CATCCATCAC 540
GGAGATGGTG TGGAAGAGGC TTTCTACACC ACAGACCGTG TCATGACCGT GTCCTTCCAC 600
AAGTATGGAG AGTACTTCCC TGGCACCGGT GACCTCAGGG ACATCGGAGC GGGAAAGGGC 660
AAATATTACG CTGTGAATTA CCCGCTGAGG GATGGGATTG ACGATGAGTC CTATGAAGCC 720
ATATTCAAGC CTATCATGGC AAAAGTGATG GAGATGTACC AACCCAGCGC GGTGGTTCTC 780
CAGTGTGGAG CTGATTCGCT GTCTGGAGAC AGGCTTGGTT GCTTTAACCT CACCATTAAA 840
GGTCATGCCA AGTGTGTGGA GTATATGAAG AGCTTCAACC TGCCACTGCT TATGCTGGGT 900
GGAGGAGGCT ACACTATCCG TAATGTGGCG CGCTGCTGGA CGTATGAGAC GGCTGTGGCC 960
CTAGATAGCT CCATCCCAAA TGAGCTTCCA TACAACGACT ACTTTGAGTA CTTTGGGCCA 1020
GACTTCAAGC TGCACATCAG CCCCTCCAAC ATGACCAATC AGAACACCAA CGACTACCTG 1080
GAGAAGATCA AGCAGCGCCT GTTTGAGAAC TTGCGGATGC TCCCTCATGC CCCTGGTGTC 1140
CAGATGCAGG CCATCCCAGA AGACGCAGTG CAGGAGGACA GCGGGGATGA GGAGGAGGAG 1200
GATCCCAACA AGCGCGTATC CATTCGTTCT CGTGACAAGA GGATAGCCTG TGAGGAGGAG 1260
TTCTCTGACT CGGAGGATGA AGGTGAAGGA GGCCGCAGAA ATGCTGCCAG CTTCAAGAAG 1320
GTCAAGCGAA CTAAAACCGA AGGAGAGAAA GAGGGAGAAG AAAAGGAGAA GAAAGAAGTC 1380
AAAGAAGAGG AGAAGGTGCC AGAGGAGGAG AAAATGGACA CATCAAAGCC AAAAGAGGAG 1440
TCCAAGACAC CTTGA 1456
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 98 0.0 821
WERAM-Xim-0229 ENSXMAP00000019038.1 Xiphophorus maculatus 94 0.0 807
WERAM-Pof-0034 ENSPFOP00000002952.2 Poecilia formosa 94 0.0 807
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 95 0.0 801
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 96 0.0 797
WERAM-Ten-0200 ENSTNIP00000020022.1 Tetraodon nigroviridis 94 0.0 791
WERAM-Orla-0192 ENSORLP00000021872.1 Oryzias latipes 98 0.0 787
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 93 0.0 787
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 91 0.0 786
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 94 0.0 779
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 97 0.0 778
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 93 0.0 776
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 93 0.0 776
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 93 0.0 776
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 93 0.0 775
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 93 0.0 775
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 93 0.0 775
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 93 0.0 775
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 93 0.0 775
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 93 0.0 775
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 93 0.0 775
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 93 0.0 775
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 91 0.0 774
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 92 0.0 773
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 92 0.0 773
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 92 0.0 773
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 92 0.0 771
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 92 0.0 769
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 92 0.0 769
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 92 0.0 768
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 93 0.0 768
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 94 0.0 767
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 92 0.0 767
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 92 0.0 767
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 94 0.0 766
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 93 0.0 766
WERAM-Xet-0050 ENSXETP00000015978.3 Xenopus tropicalis 92 0.0 763
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 92 0.0 763
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 92 0.0 763
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 92 0.0 763
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 92 0.0 763
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 93 0.0 763
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 92 0.0 763
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 92 0.0 762
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 93 0.0 761
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 91 0.0 760
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 92 0.0 755
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 92 0.0 755
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 91 0.0 753
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 92 0.0 751
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 92 0.0 748
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 90 0.0 734
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 86 0.0 719
WERAM-Mam-0083 ENSMMUP00000013015.2 Macaca mulatta 93 0.0 710
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 83 0.0 705
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 85 0.0 694
WERAM-Dio-0132 ENSDORP00000012520.1 Dipodomys ordii 86 0.0 692
WERAM-Pem-0096 ENSPMAP00000010023.1 Petromyzon marinus 82 0.0 654
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 83 0.0 654
WERAM-Mim-0092 ENSMICP00000008598.1 Microcebus murinus 83 0.0 633
WERAM-Mae-0030 ENSMEUP00000002192.1 Macropus eugenii 80 4e-179 625
WERAM-Tub-0143 ENSTBEP00000015305.1 Tupaia belangeri 86 7e-175 610
WERAM-Soa-0003 ENSSARP00000000316.1 Sorex araneus 80 3e-171 598
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 68 3e-168 588
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 65 6e-167 584
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 65 3e-166 582
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 69 7e-166 580
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 65 8e-166 580
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 64 3e-165 578
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 64 4e-165 578
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 68 4e-165 578
WERAM-Coi-0024 EAS33504 Coccidioides immitis 64 1e-163 573
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 68 1e-162 570
WERAM-Ved-0020 EGY15146 Verticillium dahliae 63 7e-161 564
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 63 1e-160 563
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 70 4e-160 561
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 69 6e-160 561
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 69 1e-159 560
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 69 1e-159 560
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 63 1e-159 560
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 69 1e-159 560
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 69 2e-159 560
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 70 2e-159 559
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 63 2e-159 559
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 69 2e-159 559
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 68 5e-159 558
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 66 7e-159 557
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 66 2e-158 556
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 62 3e-158 555
WERAM-Chh-0102 ENSCHOP00000011659.1 Choloepus hoffmanni 73 3e-158 555
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 66 3e-158 555
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 69 4e-158 555
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 69 4e-158 555
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 66 4e-158 555
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 69 5e-158 555
WERAM-Sei-0026 Si006243m Setaria italica 68 5e-158 555
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 66 7e-158 554
WERAM-Prp-0060 EMJ10303 Prunus persica 68 8e-158 554
WERAM-Amt-0072 ERN20455 Amborella trichopoda 68 1e-157 553
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 69 2e-157 553
WERAM-Trv-0003 EHK19072 Trichoderma virens 64 2e-157 553
WERAM-Met-0084 KEH36404 Medicago truncatula 69 2e-157 553
WERAM-Caa-0018 KGT69072 Candida albicans 63 2e-157 552
WERAM-Cag-0003 CAG57932 Candida glabrata 66 3e-157 552
WERAM-Thc-0029 EOY20838 Theobroma cacao 66 4e-157 551
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 70 6e-157 551
WERAM-Trr-0017 EGR48353 Trichoderma reesei 64 1e-156 550
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 62 1e-156 550
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 69 1e-156 550
WERAM-Kop-0004 CAY67954 Komagataella pastoris 66 2e-156 550
WERAM-Asg-0034 AAS54885 Ashbya gossypii 65 4e-156 548
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 67 7e-156 547
WERAM-Aet-0051 EMT16627 Aegilops tauschii 70 2e-155 546
WERAM-Pot-0149 POPTR_0015s09400.1 Populus trichocarpa 64 3e-155 545
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 59 4e-155 545
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 69 5e-155 545
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 62 6e-155 544
WERAM-Brr-0180 Bra035858.1-P Brassica rapa 68 2e-154 543
WERAM-Bro-0169 Bo9g017510.1 Brassica oleracea 67 6e-154 541
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 65 9e-154 540
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 64 1e-153 540
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 64 2e-153 540
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 68 3e-153 539
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 64 6e-153 538
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 61 2e-152 536
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 67 3e-152 535
Created Date 25-Jun-2016