| Tag |
Content |
| WERAM ID |
WERAM-Glm-0046 |
| Ensembl Protein ID |
GLYMA05G02540.1 |
| Gene Name |
GLYMA_05G040600 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
4.90e-162 |
540.6 |
30 |
343 |
|
| Organism |
Glycine max |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae..elskelkkfnvgedc 92
++v+y+y++++g+y+ygq+hpmkp+r++++h+L+++y l++++ei +p as +++ +fhs++y++fl++v+pe+ +s++lk+fnvgedc
GLYMA05G02540.1 30 RRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINRPFPASPADIRRFHSDDYVDFLSSVSPETLAdsAFSRHLKRFNVGEDC 123
589***********************************************************************987447789*********** PP
class-1.txt 93 PvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvm 186
Pvfdglf +cq+++G+sl aa kLn+ +adiainwaGGlhhakkseasGfcyvnDivl+ilellk h+rvly+did+hhGDgveeafyttdrvm
GLYMA05G02540.1 124 PVFDGLFPFCQASAGGSLGAAVKLNRADADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVM 217
********************************************************************************************** PP
class-1.txt 187 tvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkf 280
tvsfhk+g+ ffPgtG+++d+g+++gk+yavnvPl+dg+dDes++++f+++i+kv+e+++PeavvlqcGaDsl+gDrlg+fnls++gha+c++f
GLYMA05G02540.1 218 TVSFHKFGD-FFPGTGHVKDIGVGSGKNYAVNVPLNDGMDDESFRSLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVRGHADCLRF 310
*********.************************************************************************************ PP
class-1.txt 281 vksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
++sfn+pl+vlGGGGYt+rnvaRcw+yetav++
GLYMA05G02540.1 311 LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAV 343
******************************986 PP
|
Protein Sequence
(Fasta) | MGMEEESSNN SSIIEGGASL PSTGSDAKKR RVTYFYEPTI GDYYYGQGHP MKPHRIRMAH 60
NLIVHYSLHR RMEINRPFPA SPADIRRFHS DDYVDFLSSV SPETLADSAF SRHLKRFNVG 120
EDCPVFDGLF PFCQASAGGS LGAAVKLNRA DADIAINWAG GLHHAKKSEA SGFCYVNDIV 180
LGILELLKVH RRVLYVDIDV HHGDGVEEAF YTTDRVMTVS FHKFGDFFPG TGHVKDIGVG 240
SGKNYAVNVP LNDGMDDESF RSLFRTIIQK VMEVYQPEAV VLQCGADSLS GDRLGCFNLS 300
VRGHADCLRF LRSFNVPLMV LGGGGYTIRN VARCWCYETA VAVGVEPDNK LPYNEYYEYF 360
GPDYTLYVDP SNMENLNTPK DMEKIRNTLL EQISQLPHAP GVPFQTTPPT LQLPEEAEED 420
MDRRPKLRKW DGEDYDSDPD EGGKANSKFP NVTAHMRDIT DEMEEEKPEV HPSSCC 476Protein Fasta Sequence
>GLYMA05G02540.1|Class-I|Glycine max
MGMEEESSNNSSIIEGGASLPSTGSDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINRPFPASPADIRRFHSDDYVDFLSSVSPETLADSAFSRHLKRFNVGEDCPVFDGLFPFCQASAGGSLGAAVKLNRADADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHVKDIGVGSGKNYAVNVPLNDGMDDESFRSLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVRGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLYVDPSNMENLNTPKDMEKIRNTLLEQISQLPHAPGVPFQTTPPTLQLPEEAEEDMDRRPKLRKWDGEDYDSDPDEGGKANSKFPNVTAHMRDITDEMEEEKPEVHPSSCC |
Nucleotide Sequence
(Fasta) | ATAACATTTT AAAGTAGATA AGCCTTCCCC GCCCACTAGA AATAGAGAGA AGGTAAGGAG 60
GGTTTGGTTT TGGGTACTTT ACAAATTACA ATAATTAGCG AAAGAGAGAA GACATAGCAC 120
ATAGAGTCAT AGAGACATCA TCATCGTATG GGAATGGAAG AGGAGAGTAG CAACAACAGC 180
AGCATCATAG AAGGTGGTGC TTCGCTGCCA TCAACGGGTT CAGACGCCAA GAAGCGAAGA 240
GTGACGTACT TCTACGAGCC CACGATCGGC GATTACTACT ACGGTCAGGG GCACCCAATG 300
AAGCCGCACC GAATCCGCAT GGCGCACAAC CTCATCGTCC ACTACTCCCT CCACCGCCGC 360
ATGGAGATCA ACCGTCCCTT CCCGGCCTCC CCCGCCGACA TCCGCCGCTT CCACTCCGAC 420
GACTACGTCG ACTTTCTCTC CTCCGTCTCC CCCGAGACCC TCGCCGATTC CGCCTTCTCC 480
CGCCACCTCA AGCGCTTCAA CGTCGGCGAG GACTGCCCCG TCTTCGACGG CCTCTTCCCC 540
TTCTGCCAGG CCTCCGCCGG CGGCTCCCTC GGCGCCGCCG TCAAACTCAA CCGCGCCGAC 600
GCCGACATCG CCATCAATTG GGCCGGCGGC CTCCACCACG CCAAGAAGTC CGAGGCCTCT 660
GGATTCTGCT ACGTCAACGA CATTGTCCTC GGTATCCTCG AACTCCTCAA AGTTCACAGG 720
CGCGTGCTGT ATGTTGACAT TGATGTTCAC CATGGTGATG GTGTTGAGGA GGCCTTTTAC 780
ACCACTGATA GAGTGATGAC AGTGTCTTTC CATAAGTTTG GGGACTTTTT CCCTGGCACA 840
GGACACGTCA AGGACATTGG GGTGGGATCA GGAAAGAATT ATGCAGTCAA TGTCCCATTA 900
AATGACGGAA TGGATGATGA GAGTTTCCGT AGTCTGTTTC GAACCATCAT TCAAAAAGTC 960
ATGGAGGTCT ATCAACCAGA GGCAGTTGTT CTACAATGTG GAGCTGATTC ATTGTCTGGG 1020
GACAGGTTGG GTTGCTTCAA CTTGTCTGTG AGAGGTCATG CAGATTGCCT TCGTTTTCTT 1080
AGATCGTTCA ATGTTCCTTT AATGGTCTTG GGTGGGGGTG GATATACAAT TCGGAATGTT 1140
GCCCGTTGTT GGTGTTATGA GACAGCAGTG GCAGTAGGAG TGGAGCCTGA TAATAAGTTG 1200
CCTTATAATG AATATTATGA ATATTTTGGC CCAGATTATA CTCTCTATGT CGATCCAAGC 1260
AACATGGAGA ACCTAAACAC ACCCAAGGAT ATGGAAAAAA TAAGGAACAC ACTACTAGAA 1320
CAGATTTCTC AACTTCCCCA TGCTCCCGGT GTACCTTTTC AGACAACACC ACCTACCTTA 1380
CAACTTCCGG AAGAGGCAGA AGAGGACATG GATAGAAGAC CTAAACTTCG CAAATGGGAT 1440
GGTGAAGATT ATGATTCTGA TCCTGATGAA GGTGGAAAGG CTAATTCCAA GTTTCCAAAC 1500
GTCACTGCCC ATATGAGGGA CATTACAGAT GAAATGGAAG AAGAGAAACC AGAAGTGCAT 1560
CCATCATCTT GTTGTTGATA GAACAGAGCA AGTTCTTGCA CAGCATGTTT GTATTGTTAT 1620
CTTTATTCCG TTTATGGGGG AGATCATTAC TAAACAGTAC CACATGCAGC TGTTGAGAAT 1680
GCAAATATAA TCAATACATT GTGCAAATGT AATATAGTGT AAAACATTGT TTTGGTCTCT 1740
CTCGTAAACT ATTTTTGTTT AAGTCATTTT CTTTTATTTG GTCCCTGGCT TACACTTAGT 1800
TTCGTTTTAG TCTGTCATGG TCAATTTAGT TGATTTTGAA TATTCTCATT TGTGCATACT 1860
TTCATTTGGT CAAATGGATA CATCACTTTA ATTTGGTTCT TGTATCTTTT TCCTGTATGA 1920
TGAGGATATT AAAGAAAGTG AGGAAGGTGC GAAATGTTGT TGTTTTCTTG TTACTATTTC 1980
ATTTTTGAAA AATTATGT
1999Nucleotide Fasta Sequence
>GLYMA05G02540.1|Class-I|Glycine max
ATAACATTTTAAAGTAGATAAGCCTTCCCCGCCCACTAGAAATAGAGAGAAGGTAAGGAGGGTTTGGTTTTGGGTACTTTACAAATTACAATAATTAGCGAAAGAGAGAAGACATAGCACATAGAGTCATAGAGACATCATCATCGTATGGGAATGGAAGAGGAGAGTAGCAACAACAGCAGCATCATAGAAGGTGGTGCTTCGCTGCCATCAACGGGTTCAGACGCCAAGAAGCGAAGAGTGACGTACTTCTACGAGCCCACGATCGGCGATTACTACTACGGTCAGGGGCACCCAATGAAGCCGCACCGAATCCGCATGGCGCACAACCTCATCGTCCACTACTCCCTCCACCGCCGCATGGAGATCAACCGTCCCTTCCCGGCCTCCCCCGCCGACATCCGCCGCTTCCACTCCGACGACTACGTCGACTTTCTCTCCTCCGTCTCCCCCGAGACCCTCGCCGATTCCGCCTTCTCCCGCCACCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTTCCCCTTCTGCCAGGCCTCCGCCGGCGGCTCCCTCGGCGCCGCCGTCAAACTCAACCGCGCCGACGCCGACATCGCCATCAATTGGGCCGGCGGCCTCCACCACGCCAAGAAGTCCGAGGCCTCTGGATTCTGCTACGTCAACGACATTGTCCTCGGTATCCTCGAACTCCTCAAAGTTCACAGGCGCGTGCTGTATGTTGACATTGATGTTCACCATGGTGATGGTGTTGAGGAGGCCTTTTACACCACTGATAGAGTGATGACAGTGTCTTTCCATAAGTTTGGGGACTTTTTCCCTGGCACAGGACACGTCAAGGACATTGGGGTGGGATCAGGAAAGAATTATGCAGTCAATGTCCCATTAAATGACGGAATGGATGATGAGAGTTTCCGTAGTCTGTTTCGAACCATCATTCAAAAAGTCATGGAGGTCTATCAACCAGAGGCAGTTGTTCTACAATGTGGAGCTGATTCATTGTCTGGGGACAGGTTGGGTTGCTTCAACTTGTCTGTGAGAGGTCATGCAGATTGCCTTCGTTTTCTTAGATCGTTCAATGTTCCTTTAATGGTCTTGGGTGGGGGTGGATATACAATTCGGAATGTTGCCCGTTGTTGGTGTTATGAGACAGCAGTGGCAGTAGGAGTGGAGCCTGATAATAAGTTGCCTTATAATGAATATTATGAATATTTTGGCCCAGATTATACTCTCTATGTCGATCCAAGCAACATGGAGAACCTAAACACACCCAAGGATATGGAAAAAATAAGGAACACACTACTAGAACAGATTTCTCAACTTCCCCATGCTCCCGGTGTACCTTTTCAGACAACACCACCTACCTTACAACTTCCGGAAGAGGCAGAAGAGGACATGGATAGAAGACCTAAACTTCGCAAATGGGATGGTGAAGATTATGATTCTGATCCTGATGAAGGTGGAAAGGCTAATTCCAAGTTTCCAAACGTCACTGCCCATATGAGGGACATTACAGATGAAATGGAAGAAGAGAAACCAGAAGTGCATCCATCATCTTGTTGTTGATAGAACAGAGCAAGTTCTTGCACAGCATGTTTGTATTGTTATCTTTATTCCGTTTATGGGGGAGATCATTACTAAACAGTACCACATGCAGCTGTTGAGAATGCAAATATAATCAATACATTGTGCAAATGTAATATAGTGTAAAACATTGTTTTGGTCTCTCTCGTAAACTATTTTTGTTTAAGTCATTTTCTTTTATTTGGTCCCTGGCTTACACTTAGTTTCGTTTTAGTCTGTCATGGTCAATTTAGTTGATTTTGAATATTCTCATTTGTGCATACTTTCATTTGGTCAAATGGATACATCACTTTAATTTGGTTCTTGTATCTTTTTCCTGTATGATGAGGATATTAAAGAAAGTGAGGAAGGTGCGAAATGTTGTTGTTTTCTTGTTACTATTTCATTTTTGAAAAATTATGT
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
