WERAM Information

Tag Content
WERAM ID WERAM-Leo-0176
Ensembl Protein ID ENSLOCP00000020984.1
Gene Name HDAC2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLOCG00000016977.1 ENSLOCT00000021020.1 ENSLOCP00000020984.1
ENSLOCG00000016977.1 ENSLOCT00000021021.1 ENSLOCP00000020985.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.20e-175 582.8 11 322
Organism Lepisosteus oculatus
Domain Profile
  HDAC Class-I
           class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 
                           kkv+y+yd d+g+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+aee++k+hs++yi+fl+++++en++e+sk++++fnvg
  ENSLOCP00000020984.1  11 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDDYIKFLRSIRTENMSEFSKQMQRFNVG 99 
                           589************************************************************************************** PP
           class-1.txt  90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
                           edcPvfdglfe+cql+tG+s ++a kLn++++diainwaGGlhhakkseasGfcyvnDivl+ilellk+h+rvlyidid+hhGDgveea
  ENSLOCP00000020984.1 100 EDCPVFDGLFEFCQLSTGGSAAGAVKLNRQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDIHHGDGVEEA 188
                           ***************************************************************************************** PP
           class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
                           fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidD+sye+ifk+v+ kv+e+++P+avvlqcGaDsl+gDrlg+f
  ENSLOCP00000020984.1 189 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDDSYEQIFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCF 276
                           *****************.*********************************************************************** PP
           class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                           nl+i+gha+cv+++ksfnlpll+lGGGGYt+rnv+Rcwtyetav+l
  ENSLOCP00000020984.1 277 NLTIRGHAKCVEYMKSFNLPLLMLGGGGYTIRNVSRCWTYETAVAL 322
                           *******************************************987 PP
Protein Sequence
(Fasta)		MAYTLQGGLK KKVCYYYDGD IGNYYYGQGH PMKPHRIRMT HNLLLNYGLY RKMEIYRPHK 60
ATAEEMTKYH SDDYIKFLRS IRTENMSEFS KQMQRFNVGE DCPVFDGLFE FCQLSTGGSA 120
AGAVKLNRQQ TDIAINWAGG LHHAKKSEAS GFCYVNDIVL GILELLKYHQ RVLYIDIDIH 180
HGDGVEEAFY TTDRVMTVSF HKYGEYFPGT GDLRDIGAGK GKYYAVNFPL RDGIDDDSYE 240
QIFKPVMAKV MEMYQPSAVV LQCGADSLSG DRLGCFNLTI RGHAKCVEYM KSFNLPLLML 300
GGGGYTIRNV SRCWTYETAV ALDTDIPDEL PYNDYFEYFG PDFKLHISPS NMTNQNTQEY 360
LDKIKQRLFE NLRMLPHAPG VQMQAIPEDI VPEDTGDEDA DNPDKRLSIR ASDKRIACDE 420
EFSDSEDEGE GGRRNVANHK KNVKRARLEE DPREAEEKKS EVKEEEKSKE NSSEKTDAKT 480
VKAEQPSSA 489
Nucleotide Sequence
(Fasta)		GTACAGACGG ATACTTTATT TCTGTTAGTA CAGTACTTCA AAAACATGAC CGGTATAGAT 60
CACATTTATT CATATATTGG ATATAGTGCT TTGTCCTGCT GACGACGGCA TAACTGGTAT 120
CTAAAATTAT TTCTGTTCGT GTTAGTAGCC TCACACAACC CTGGATCAGA AGTGGCTTCA 180
CCATCTACAA ATGATCAGCG AGATACCAAT AAATAATATA TTGTTTTACT TCAATGATTG 240
ACGCACTAAG GCCCGTCGGT GTTACAGAGT GTGTTGATGG ACAGCTGGAA TATTTCCGTC 300
TTCTTTATTC AGTCCGATGC TCGGCGCTGG ATATAAGACA CCCCCACCAC CACACGGCCC 360
ACCTCTTTCT CGTCAGTGTA CCGCCCCGCT CCCCGTCTTT CCTTATCTCT CCGCCGAAAA 420
TATAACCAGC TTCCGTCGAC CCGACATCAC CTTTCGATCA GAGAGTAATC ATGGCATATA 480
CCCTCCAAGG CGGTTTAAAG AAGAAAGTCT GCTACTATTA TGACGGTGAC ATTGGAAACT 540
ATTATTATGG ACAGGGGCAT CCCATGAAAC CTCACAGAAT TCGCATGACC CACAACTTGC 600
TTTTAAACTA TGGGCTTTAC AGGAAAATGG AAATCTATAG ACCTCATAAG GCCACAGCTG 660
AAGAAATGAC AAAGTACCAC AGTGATGATT ACATCAAGTT CCTCAGATCA ATCAGAACAG 720
AAAACATGTC TGAATTCAGC AAACAAATGC AAAGATTCAA TGTTGGGGAA GACTGTCCAG 780
TCTTTGATGG GTTGTTCGAG TTCTGCCAGC TGTCAACAGG GGGATCTGCT GCTGGAGCAG 840
TGAAGCTGAA CAGGCAGCAG ACGGACATTG CAATCAACTG GGCCGGAGGG CTTCACCACG 900
CCAAGAAGTC CGAGGCCTCC GGGTTCTGCT ATGTCAATGA TATTGTTCTA GGAATCCTTG 960
AGCTGCTCAA ATACCACCAG AGAGTTCTGT ACATTGACAT TGATATCCAT CATGGAGATG 1020
GTGTGGAAGA GGCCTTCTAC ACAACCGACC GTGTCATGAC AGTTTCATTT CATAAATATG 1080
GAGAGTACTT CCCAGGCACC GGAGACCTTC GAGATATAGG TGCAGGAAAA GGCAAATACT 1140
ATGCTGTCAA CTTCCCACTG AGAGATGGAA TAGATGATGA CTCATATGAA CAAATATTTA 1200
AGCCAGTAAT GGCCAAGGTA ATGGAGATGT ACCAGCCCAG TGCAGTTGTC CTGCAGTGTG 1260
GGGCCGACTC GCTCTCTGGA GATCGGCTTG GCTGCTTTAA CCTAACAATA AGAGGTCATG 1320
CAAAATGTGT GGAATACATG AAGTCTTTCA ATCTACCTTT GCTGATGTTG GGGGGAGGGG 1380
GCTACACCAT CCGTAATGTT TCCCGATGTT GGACATACGA AACTGCTGTG GCACTGGATA 1440
CAGATATTCC TGATGAATTG CCATACAATG ATTACTTCGA ATACTTTGGA CCTGACTTTA 1500
AGTTGCACAT CAGTCCCTCC AACATGACAA ACCAGAACAC GCAAGAGTAT CTGGACAAGA 1560
TCAAACAGCG CCTGTTTGAG AACCTGAGAA TGTTGCCGCA CGCCCCAGGA GTACAGATGC 1620
AGGCCATTCC CGAGGACATT GTGCCCGAAG ACACTGGGGA CGAAGACGCT GATAACCCAG 1680
ACAAGCGCTT ATCAATCCGG GCATCTGACA AAAGGATAGC CTGCGATGAA GAGTTTTCTG 1740
ACTCTGAAGA CGAAGGAGAG GGAGGGAGGA GAAATGTTGC AAATCACAAG AAAAACGTGA 1800
AGCGCGCCAG GCTAGAAGAG GATCCGAGAG AAGCCGAGGA GAAGAAATCG GAAGTAAAAG 1860
AAGAAGAGAA ATCTAAGGAA AACAGCTCAG AAAAGACAGA TGCCAAAACC GTCAAGGCCG 1920
AGCAGCCTAG TAGTGCTTGA ACAAACCGTA AAGGCAAAAA GATCTGGAAC CATTAAACTG 1980
GCAATCGATT TGCTGGACTT CGCTTTGGAT TCAAAACCTT AACACCCTAT TTATTTTGAT 2040
CTGTGTTATA GATGTGAGAT GTGTGTCGTG AGTTTATCAC AAAAAAAAAA AAATCTTATA 2100
ATGGCACTGT TTTGTATTGG TATCATGGTA TAGGATTAAG ATGATGTATT TTCTTTTAAT 2160
ACCCTTAAAC GAAAGCATTT TTATTGCAAA GGGACATTTT TTTACATTTT ATAACCATTT 2220
TTAATTAAAA TGTTTTAGAG ATGATGTTTG ATGATGTTAA TGTAGGTGTG GTTTTTAAAA 2280
GATGAAAACC TGCAAAGGCA TCATTTTTGT TTTAGTTTCA CACTTTTCAT TTCTGTAATA 2340
AAAGCTTTTT TATAAATGTG TTGTGCGTTT ATTGTACTGA ATTGGAGATT AATGTTTGTT 2400
TGTTTTTTAC CTGATTAGCT CCTAGATTCT TTTTTCCAGA CTATACATGA ATTCCCAATC 2460
AACAGATACT CCTGGAGGAG TTGAGCAACG 2491
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 90 0.0 805
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 90 0.0 801
WERAM-Xim-0061 ENSXMAP00000005239.1 Xiphophorus maculatus 93 0.0 800
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 93 0.0 800
WERAM-Orn-0136 ENSONIP00000014285.1 Oreochromis niloticus 91 0.0 800
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 88 0.0 798
WERAM-Ten-0060 ENSTNIP00000007837.1 Tetraodon nigroviridis 90 0.0 797
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 88 0.0 790
WERAM-Tag-0146 ENSTGUP00000012328.1 Taeniopygia guttata 88 0.0 790
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 95 0.0 788
WERAM-Anc-0129 ENSACAP00000012046.2 Anolis carolinensis 88 0.0 788
WERAM-Myl-0035 ENSMLUP00000002835.2 Myotis lucifugus 89 0.0 788
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 89 0.0 788
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 89 0.0 788
WERAM-Chs-0191 ENSCSAP00000011772.1 Chlorocebus sabaeus 89 0.0 788
WERAM-Hos-0228 ENSP00000430432.1 Homo sapiens 89 0.0 788
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 89 0.0 788
WERAM-Gaga-0137 ENSGALP00000024133.3 Gallus gallus 89 0.0 788
WERAM-Xet-0050 ENSXETP00000015978.3 Xenopus tropicalis 88 0.0 788
WERAM-Mum-0029 ENSMUSP00000019911.7 Mus musculus 89 0.0 787
WERAM-Orc-0004 ENSOCUP00000000521.2 Oryctolagus cuniculus 88 0.0 787
WERAM-Sus-0028 ENSSSCP00000004781.2 Sus scrofa 89 0.0 786
WERAM-Ran-0006 ENSRNOP00000000742.6 Rattus norvegicus 89 0.0 785
WERAM-Cap-0156 ENSCPOP00000012920.2 Cavia porcellus 89 0.0 785
WERAM-Ova-0099 ENSOARP00000010190.1 Ovis aries 88 0.0 785
WERAM-Loa-0063 ENSLAFP00000004670.4 Loxodonta africana 89 0.0 785
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 88 0.0 785
WERAM-Aim-0151 ENSAMEP00000013919.1 Ailuropoda melanoleuca 88 0.0 783
WERAM-Pat-0155 ENSPTRP00000049696.3 Pan troglodytes 89 0.0 783
WERAM-Poa-0153 ENSPPYP00000018964.2 Pongo abelii 89 0.0 783
WERAM-Nol-0145 ENSNLEP00000015855.1 Nomascus leucogenys 89 0.0 782
WERAM-Dan-0143 ENSDNOP00000031144.1 Dasypus novemcinctus 89 0.0 782
WERAM-Gog-0059 ENSGGOP00000005320.2 Gorilla gorilla 89 0.0 781
WERAM-Mup-0118 ENSMPUP00000010193.1 Mustela putorius furo 91 0.0 780
WERAM-Caf-0048 ENSCAFP00000006011.3 Canis familiaris 87 0.0 779
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 88 0.0 777
WERAM-Anp-0059 ENSAPLP00000006605.1 Anas platyrhynchos 88 0.0 776
WERAM-Meg-0131 ENSMGAP00000014157.2 Meleagris gallopavo 88 0.0 775
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 88 0.0 773
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 88 0.0 772
WERAM-Eqc-0098 ENSECAP00000011591.1 Equus caballus 88 0.0 772
WERAM-Fec-0156 ENSFCAP00000015379.2 Felis catus 88 0.0 771
WERAM-Pes-0022 ENSPSIP00000004737.1 Pelodiscus sinensis 89 0.0 769
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 91 0.0 764
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 91 0.0 760
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 87 0.0 757
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 89 0.0 755
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 90 0.0 754
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 89 0.0 754
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 89 0.0 751
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 90 0.0 748
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 90 0.0 747
WERAM-Dio-0132 ENSDORP00000012520.1 Dipodomys ordii 83 0.0 716
WERAM-Mam-0073 ENSMMUP00000011716.2 Macaca mulatta 83 0.0 716
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 80 0.0 704
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 85 0.0 703
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 82 0.0 686
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 80 0.0 678
WERAM-Pem-0096 ENSPMAP00000010023.1 Petromyzon marinus 79 0.0 647
WERAM-Soa-0003 ENSSARP00000000316.1 Sorex araneus 75 6e-177 617
WERAM-Mim-0092 ENSMICP00000008598.1 Microcebus murinus 80 4e-176 615
WERAM-Mae-0030 ENSMEUP00000002192.1 Macropus eugenii 76 1e-174 610
WERAM-Tub-0143 ENSTBEP00000015305.1 Tupaia belangeri 84 9e-170 593
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 66 4e-166 582
WERAM-Chh-0102 ENSCHOP00000011659.1 Choloepus hoffmanni 72 8e-166 580
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 66 1e-165 580
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 67 1e-165 580
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 66 2e-165 579
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 65 3e-165 578
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 65 6e-165 578
WERAM-Coi-0024 EAS33504 Coccidioides immitis 65 2e-163 573
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 68 2e-162 569
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 68 3e-162 569
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 66 6e-161 564
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 64 1e-160 563
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 65 7e-160 561
WERAM-Ved-0020 EGY15146 Verticillium dahliae 64 1e-159 560
WERAM-Caa-0018 KGT69072 Candida albicans 66 4e-159 558
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 66 6e-159 558
WERAM-Cag-0003 CAG57932 Candida glabrata 66 2e-158 556
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 66 2e-158 556
WERAM-Asg-0034 AAS54885 Ashbya gossypii 65 2e-158 556
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 66 5e-158 555
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 69 6e-158 554
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 63 7e-158 554
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 69 1e-157 553
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 69 1e-157 553
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 69 1e-157 553
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 69 2e-157 553
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 69 2e-157 552
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 69 2e-157 552
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 63 5e-157 551
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 63 5e-157 551
WERAM-Trv-0003 EHK19072 Trichoderma virens 63 7e-157 551
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 65 7e-157 551
WERAM-Kop-0004 CAY67954 Komagataella pastoris 66 1e-156 550
WERAM-Met-0084 KEH36404 Medicago truncatula 68 2e-156 549
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 68 3e-156 548
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 69 4e-156 548
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 69 4e-156 548
WERAM-Sei-0026 Si006243m Setaria italica 68 4e-156 548
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 68 5e-156 548
WERAM-Trr-0017 EGR48353 Trichoderma reesei 64 8e-156 547
WERAM-Amt-0072 ERN20455 Amborella trichopoda 67 1e-155 547
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 68 1e-155 546
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 63 2e-155 546
WERAM-Prp-0060 EMJ10303 Prunus persica 67 4e-155 545
WERAM-Thc-0029 EOY20838 Theobroma cacao 64 7e-155 544
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 62 8e-155 544
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 68 8e-155 544
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 69 2e-154 543
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 65 2e-154 543
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 64 3e-154 542
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 59 6e-154 541
WERAM-Aet-0051 EMT16627 Aegilops tauschii 69 1e-153 540
WERAM-Pot-0149 POPTR_0015s09400.1 Populus trichocarpa 64 2e-153 540
WERAM-Sol-0082 Solyc06g071680.2.1 Solanum lycopersicum 64 2e-153 539
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 64 3e-153 539
WERAM-Brr-0180 Bra035858.1-P Brassica rapa 67 3e-152 535
WERAM-Lab-0002 EDR16061 Laccaria bicolor 63 3e-152 535
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 67 3e-152 535
WERAM-Pug-0005 EFP76878 Puccinia graminis 63 6e-152 535
WERAM-Bro-0169 Bo9g017510.1 Brassica oleracea 66 8e-152 534
Created Date 25-Jun-2016