| Tag |
Content |
| WERAM ID |
WERAM-Thc-0029 |
| Ensembl Protein ID |
EOY20838 |
| Gene Name |
TCM_012179 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
7.70e-162 |
539.3 |
19 |
332 |
|
| Organism |
Theobroma cacao |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae..elskelkkfnvgedcPvfd 96
++v+y+y++++g+y+ygq+hpmkp+r++++h+L+++y l++++ei +p a +++ +fh++ey++fl++v+pe+ + ++s++lk+fnvgedcPvfd
EOY20838 19 RRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINRPFPAGPADIRRFHTDEYVDFLNSVSPESISdpTYSRHLKRFNVGEDCPVFD 116
589***********************************************************************99877899**************** PP
class-1.txt 97 glfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkyg 194
glf +cq+++G+s+ aa kLn+++adiainwaGGlhhakkseasGfcyvnDivl+ilellk h+rvly+did+hhGDgveeafyttdrvmtvsfhk+g
EOY20838 117 GLFGFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFG 214
************************************************************************************************** PP
class-1.txt 195 eeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllvlG 292
+ ffPgtG+++dvg+++gk+ya+nvPl+dg+dDes++ +f+++i+kv+e+++P+avvlqcGaDsl+gDrlg+fnls+kgha+c++f++sfn+pl+vlG
EOY20838 215 D-FFPGTGHIRDVGVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLG 311
*.************************************************************************************************ PP
class-1.txt 293 GGGYtlrnvaRcwtyetavvl 313
GGGYt+rnvaRcw+yetav++
EOY20838 312 GGGYTIRNVARCWCYETAVAV 332
******************986 PP
|
Protein Sequence
(Fasta) | MEDSAGGASL PSGPDAKKRR VTYFYEPTIG DYYYGQGHPM KPHRIRMAHN LIVHYSLHRR 60
MEINRPFPAG PADIRRFHTD EYVDFLNSVS PESISDPTYS RHLKRFNVGE DCPVFDGLFG 120
FCQASAGGSI GAAVKLNRGD ADIAINWAGG LHHAKKSEAS GFCYVNDIVL GILELLKVHR 180
RVLYVDIDVH HGDGVEEAFY TTDRVMTVSF HKFGDFFPGT GHIRDVGVGN GKHYALNVPL 240
NDGMDDESFR GLFQPIIQKV MEVYQPDAVV LQCGADSLSG DRLGCFNLSV KGHADCLRFL 300
RSFNVPLMVL GGGGYTIRNV ARCWCYETAV AVGVEPDNKL PYNEYYEYFG PDYTLHVAPG 360
NMENLNAPRD MEKIRNTLLE QLSKLSHAPS VPFQTTPSTI QAPEEAEEDM DKRPKPRIWN 420
GDDYESDPED DEKTLCRFSS SDAKQTTTDA EMRDVPEDLK EVQAEGQPTS Protein Fasta Sequence
>EOY20838|Class-I|Theobroma cacao
MEDSAGGASLPSGPDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINRPFPAGPADIRRFHTDEYVDFLNSVSPESISDPTYSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPSVPFQTTPSTIQAPEEAEEDMDKRPKPRIWNGDDYESDPEDDEKTLCRFSSSDAKQTTTDAEMRDVPEDLKEVQAEGQPTS |
Nucleotide Sequence
(Fasta) | ATACACGATT GAAAATTTTA ATTATTTTAA AAATTTATTT TTTTTAATTA CGATCAAATT 60
AAATGACTAG GTGAAATTAT AATTCAATTA TGTATTAAAT ACATTAAGTT ATATATTTAA 120
TTAAAAAATA ATTATTTTCT ATGATGTTTT ATTGGAGATA AACTTACCTC GTTAAATTTT 180
AAAAATACTA TTTATTGCTC GTAAAAATTA CTAGTTGAAC CAAGTTTACT TTTAACACTA 240
TAGATACCCT CATTTTGTTT TTTTTTCCCT TTTTTTTGTT TTAATCAATT TCTTTAACAC 300
TATTTTTTTT TCAAATTGAT AAAAAATAAT TATTTTGACT AAATATAATT TAATACAATT 360
ATAATCAAGT AAAAAATAAA TTAAAATATT TTAGTTTATA ATTGAATTAG AATATAACTT 420
AATTATTTCT TCTCAGTTCT CTCTTAACTC GCGAGTCTCT GCTCTATTTG CCCTTTTGGC 480
TCTTCCCTCT TTCCACAAAG AGATATACCC AAAAAGCAAA AACAGTGCCT GGTTTGTGTC 540
CGTACGAATG GAAGACTCCG CCGGGGGTGC GTCACTACCT TCGGGACCCG ACGCGAAGAA 600
GCGGCGGGTG ACATACTTCT ACGAGCCAAC GATCGGCGAC TACTACTACG GTCAGGGTCA 660
CCCGATGAAG CCCCACCGGA TCCGTATGGC ACACAACCTC ATCGTACACT ACTCTCTCCA 720
CCGTCGGATG GAGATTAACC GTCCTTTCCC CGCCGGCCCC GCCGACATCC GCCGCTTCCA 780
TACCGACGAG TACGTCGATT TCCTCAACTC CGTCAGCCCC GAGTCCATCT CCGACCCCAC 840
TTATTCTCGC CATTTGAAGC GTTTCAATGT CGGAGAAGAT TGCCCCGTGT TCGATGGGCT 900
TTTTGGGTTC TGCCAGGCCT CCGCCGGTGG CTCCATTGGG GCCGCCGTTA AGCTGAATAG 960
AGGGGATGCC GACATCGCCA TCAATTGGGC TGGTGGGTTG CACCATGCTA AGAAAAGTGA 1020
GGCTTCTGGG TTTTGCTATG TTAATGATAT CGTGCTTGGG ATTCTTGAGC TCCTTAAGGT 1080
TCACAGGCGT GTGCTGTATG TAGATATTGA TGTTCATCAT GGAGATGGTG TTGAAGAGGC 1140
ATTTTACACC ACTGACAGAG TTATGACTGT GTCTTTCCAT AAATTTGGGG ATTTCTTCCC 1200
AGGGACTGGG CACATCAGGG ATGTTGGGGT GGGCAATGGG AAGCACTATG CTTTGAATGT 1260
TCCATTGAAT GATGGGATGG ATGACGAGAG TTTCCGGGGT CTGTTTCAGC CTATCATCCA 1320
AAAGGTCATG GAAGTGTATC AGCCAGATGC AGTTGTTCTC CAATGTGGAG CAGATTCATT 1380
GTCCGGTGAC AGGTTGGGTT GCTTCAATTT GTCTGTGAAG GGACATGCAG ATTGTCTTCG 1440
CTTCCTTAGA TCTTTTAATG TTCCTCTAAT GGTCTTGGGT GGGGGAGGCT ATACTATCCG 1500
GAATGTTGCC CGATGTTGGT GCTATGAGAC AGCCGTTGCA GTTGGGGTGG AGCCTGATAA 1560
TAAGTTGCCT TATAATGAAT ATTATGAGTA TTTTGGTCCA GATTATACAC TTCATGTTGC 1620
GCCTGGTAAC ATGGAGAACC TGAATGCACC GAGAGATATG GAGAAGATTA GGAACACACT 1680
ATTAGAGCAG CTTTCTAAAC TATCTCATGC ACCGAGTGTA CCTTTTCAAA CAACACCATC 1740
CACCATCCAA GCCCCTGAGG AGGCAGAAGA GGATATGGAT AAACGGCCAA AACCTCGCAT 1800
ATGGAATGGT GACGATTATG AGTCAGATCC TGAAGATGAT GAGAAAACTC TATGCAGATT 1860
CTCAAGTTCT GATGCAAAAC AGACTACAAC AGATGCTGAA ATGAGGGATG TACCGGAAGA 1920
CTTGAAAGAA GTGCAAGCAG AAGGGCAGCC AACATCCTGA CGCTGAGGGA ACTTCTGAGC 1980
TTCTAGATTT CATTGTACTT CATCTTTGTA TAATTTGAAC TTGAGATCTT CATTCAAATC 2040
AGGGCGTTTT TTTGACATTA CTAGCAAGCA TTCTTTGATC TTTCTGAATT AGGCATTAGA 2100
GTAGGAATTT TTAGTCACTG ATGTCCCACC CTTATGTTTG GCAGCATGAA GTGTTAGAAT 2160
CAAAGATACA ATGAATA
2178Nucleotide Fasta Sequence
>EOY20838|Class-I|Theobroma cacao
ATACACGATTGAAAATTTTAATTATTTTAAAAATTTATTTTTTTTAATTACGATCAAATTAAATGACTAGGTGAAATTATAATTCAATTATGTATTAAATACATTAAGTTATATATTTAATTAAAAAATAATTATTTTCTATGATGTTTTATTGGAGATAAACTTACCTCGTTAAATTTTAAAAATACTATTTATTGCTCGTAAAAATTACTAGTTGAACCAAGTTTACTTTTAACACTATAGATACCCTCATTTTGTTTTTTTTTCCCTTTTTTTTGTTTTAATCAATTTCTTTAACACTATTTTTTTTTCAAATTGATAAAAAATAATTATTTTGACTAAATATAATTTAATACAATTATAATCAAGTAAAAAATAAATTAAAATATTTTAGTTTATAATTGAATTAGAATATAACTTAATTATTTCTTCTCAGTTCTCTCTTAACTCGCGAGTCTCTGCTCTATTTGCCCTTTTGGCTCTTCCCTCTTTCCACAAAGAGATATACCCAAAAAGCAAAAACAGTGCCTGGTTTGTGTCCGTACGAATGGAAGACTCCGCCGGGGGTGCGTCACTACCTTCGGGACCCGACGCGAAGAAGCGGCGGGTGACATACTTCTACGAGCCAACGATCGGCGACTACTACTACGGTCAGGGTCACCCGATGAAGCCCCACCGGATCCGTATGGCACACAACCTCATCGTACACTACTCTCTCCACCGTCGGATGGAGATTAACCGTCCTTTCCCCGCCGGCCCCGCCGACATCCGCCGCTTCCATACCGACGAGTACGTCGATTTCCTCAACTCCGTCAGCCCCGAGTCCATCTCCGACCCCACTTATTCTCGCCATTTGAAGCGTTTCAATGTCGGAGAAGATTGCCCCGTGTTCGATGGGCTTTTTGGGTTCTGCCAGGCCTCCGCCGGTGGCTCCATTGGGGCCGCCGTTAAGCTGAATAGAGGGGATGCCGACATCGCCATCAATTGGGCTGGTGGGTTGCACCATGCTAAGAAAAGTGAGGCTTCTGGGTTTTGCTATGTTAATGATATCGTGCTTGGGATTCTTGAGCTCCTTAAGGTTCACAGGCGTGTGCTGTATGTAGATATTGATGTTCATCATGGAGATGGTGTTGAAGAGGCATTTTACACCACTGACAGAGTTATGACTGTGTCTTTCCATAAATTTGGGGATTTCTTCCCAGGGACTGGGCACATCAGGGATGTTGGGGTGGGCAATGGGAAGCACTATGCTTTGAATGTTCCATTGAATGATGGGATGGATGACGAGAGTTTCCGGGGTCTGTTTCAGCCTATCATCCAAAAGGTCATGGAAGTGTATCAGCCAGATGCAGTTGTTCTCCAATGTGGAGCAGATTCATTGTCCGGTGACAGGTTGGGTTGCTTCAATTTGTCTGTGAAGGGACATGCAGATTGTCTTCGCTTCCTTAGATCTTTTAATGTTCCTCTAATGGTCTTGGGTGGGGGAGGCTATACTATCCGGAATGTTGCCCGATGTTGGTGCTATGAGACAGCCGTTGCAGTTGGGGTGGAGCCTGATAATAAGTTGCCTTATAATGAATATTATGAGTATTTTGGTCCAGATTATACACTTCATGTTGCGCCTGGTAACATGGAGAACCTGAATGCACCGAGAGATATGGAGAAGATTAGGAACACACTATTAGAGCAGCTTTCTAAACTATCTCATGCACCGAGTGTACCTTTTCAAACAACACCATCCACCATCCAAGCCCCTGAGGAGGCAGAAGAGGATATGGATAAACGGCCAAAACCTCGCATATGGAATGGTGACGATTATGAGTCAGATCCTGAAGATGATGAGAAAACTCTATGCAGATTCTCAAGTTCTGATGCAAAACAGACTACAACAGATGCTGAAATGAGGGATGTACCGGAAGACTTGAAAGAAGTGCAAGCAGAAGGGCAGCCAACATCCTGACGCTGAGGGAACTTCTGAGCTTCTAGATTTCATTGTACTTCATCTTTGTATAATTTGAACTTGAGATCTTCATTCAAATCAGGGCGTTTTTTTGACATTACTAGCAAGCATTCTTTGATCTTTCTGAATTAGGCATTAGAGTAGGAATTTTTAGTCACTGATGTCCCACCCTTATGTTTGGCAGCATGAAGTGTTAGAATCAAAGATACAATGAATA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
