| Tag |
Content |
| WERAM ID |
WERAM-Gaa-0093 |
| Ensembl Protein ID |
ENSGACP00000012045.1 |
| Gene Name |
hdac1 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
8.80e-176 |
584.4 |
9 |
371 |
|
| Organism |
Gasterosteus aculeatus |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89
kkv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+kas ee++k+hs++yi+fl++++p+n++e+sk++++fnvg
ENSGACP00000012045.1 9 KKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 97
589************************************************************************************** PP
class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
edcPvfdglfe+cql++G+s+++a kLnk+++diainwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea
ENSGACP00000012045.1 98 EDCPVFDGLFEFCQLSAGGSVAGALKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
***************************************************************************************** PP
class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+ifk+++ kv+e+++P+avvlqcGaDsl+gDrlg+f
ENSGACP00000012045.1 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCF 274
*****************.*********************************************************************** PP
class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
nl+ikgha+cv+++ksfnlpll+lGGGGYt+rnvaRcwtyetav+l
ENSGACP00000012045.1 275 NLTIKGHAKCVEYIKSFNLPLLMLGGGGYTIRNVARCWTYETAVAL 320
*******************************************987 PP
class-1.txt 54 eellkfhseeyieflkkvepenae 77
+++++ +++ey+e +k+ en +
ENSGACP00000012045.1 348 SNMTNQNTNEYLEKIKQRLFENLR 371
578888899999888887666655 PP
|
Protein Sequence
(Fasta) | MALSQGTKKK VCYYYDGDVG NYYYGQGHPM KPHRIRMTHN LLLNYGLYRK MEIYRPHKAS 60
GEEMTKYHSD DYIKFLRSIR PDNMSEYSKQ MQRFNVGEDC PVFDGLFEFC QLSAGGSVAG 120
ALKLNKQQTD IAINWAGGLH HAKKSEASGF CYVNDIVLAI LELLKYHQRV LYIDIDIHHG 180
DGVEEAFYTT DRVMTVSFHK YGEYFPGTGD LRDIGAGKGK YYAVNYPLRD GIDDESYEAI 240
FKPIMAKVME MYQPSAVVLQ CGADSLSGDR LGCFNLTIKG HAKCVEYIKS FNLPLLMLGG 300
GGYTIRNVAR CWTYETAVAL DSSIPNELPY NDYFEYFGPD FKLHISPSNM TNQNTNEYLE 360
KIKQRLFENL RMLPHAPGVQ MQAIPEDAPH PDSGEEDEEE PDKRVSIRAH DKRIACEEEF 420
SDSEDEAEGQ GGGRRNAANH Protein Fasta Sequence
>ENSGACP00000012045.1|Class-I|Gasterosteus aculeatus
MALSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVAGALKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKSFNLPLLMLGGGGYTIRNVARCWTYETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAPHPDSGEEDEEEPDKRVSIRAHDKRIACEEEFSDSEDEAEGQGGGRRNAANH |
Nucleotide Sequence
(Fasta) | TAAACGGTGC AGTAATTGGG GGCTAAAATG GCGCTGTCTC AAGGAACAAA GAAAAAAGTT 60
TGCTATTACT ATGACGGGGA CGTTGGGAAC TACTACTACG GCCAAGGCCA TCCCATGAAG 120
CCCCACAGGA TCCGCATGAC GCACAACCTC CTCCTCAACT ACGGGCTGTA CAGGAAAATG 180
GAGATTTACA GACCACACAA AGCCAGCGGC GAAGAGATGA CGAAATACCA CAGCGACGAC 240
TACATTAAGT TCCTGAGGTC CATACGACCA GACAACATGT CTGAGTACAG CAAACAGATG 300
CAGCGATTCA ACGTTGGAGA GGACTGTCCG GTGTTTGACG GTCTGTTTGA GTTTTGCCAG 360
CTCTCAGCAG GTGGATCTGT TGCTGGGGCG TTGAAGTTGA ACAAGCAGCA GACGGATATC 420
GCCATCAACT GGGCCGGCGG ACTCCACCAC GCCAAGAAGT CCGAGGCCTC GGGTTTCTGC 480
TACGTCAACG ACATCGTCCT GGCCATTCTG GAGCTGCTAA AGTACCACCA GAGGGTGTTG 540
TACATCGACA TTGACATCCA CCACGGGGAT GGCGTGGAGG AGGCCTTCTA CACGACGGAC 600
AGGGTCATGA CCGTCTCCTT CCACAAGTAC GGGGAGTACT TCCCCGGCAC CGGAGACCTG 660
AGGGACATCG GCGCCGGAAA GGGCAAATAC TACGCGGTGA ACTACCCGCT GAGGGACGGC 720
ATCGACGACG AGTCCTACGA AGCCATCTTC AAACCCATCA TGGCTAAAGT CATGGAGATG 780
TACCAGCCCA GCGCGGTGGT CCTCCAGTGT GGAGCCGATT CTCTCTCTGG AGACCGACTG 840
GGCTGCTTCA ACCTCACCAT CAAAGGCCAC GCCAAATGTG TGGAGTACAT CAAAAGCTTC 900
AACCTGCCCC TGCTGATGCT GGGCGGCGGG GGCTACACCA TCCGCAACGT GGCCCGTTGC 960
TGGACGTACG AGACGGCGGT GGCCCTGGAC TCGTCCATCC CCAACGAGCT GCCCTACAAC 1020
GACTACTTCG AGTACTTCGG GCCCGACTTC AAGCTGCACA TCAGCCCGTC CAACATGACC 1080
AACCAGAACA CTAACGAGTA CCTGGAGAAG ATCAAGCAGC GCCTGTTCGA GAACCTCCGC 1140
ATGCTGCCGC ACGCGCCGGG CGTCCAGATG CAGGCCATCC CCGAGGACGC CCCCCACCCG 1200
GACAGCGGCG AGGAGGACGA GGAGGAGCCC GACAAGCGCG TCTCCATCCG GGCACACGAC 1260
AAAAGGATCG CCTGCGAGGA AGAGTTCTCT GACTCGGAGG ACGAGGCGGA GGGGCAGGGG 1320
GGCGGCCGCA GGAACGCAGC CAACCAC
1348Nucleotide Fasta Sequence
>ENSGACP00000012045.1|Class-I|Gasterosteus aculeatus
TAAACGGTGCAGTAATTGGGGGCTAAAATGGCGCTGTCTCAAGGAACAAAGAAAAAAGTTTGCTATTACTATGACGGGGACGTTGGGAACTACTACTACGGCCAAGGCCATCCCATGAAGCCCCACAGGATCCGCATGACGCACAACCTCCTCCTCAACTACGGGCTGTACAGGAAAATGGAGATTTACAGACCACACAAAGCCAGCGGCGAAGAGATGACGAAATACCACAGCGACGACTACATTAAGTTCCTGAGGTCCATACGACCAGACAACATGTCTGAGTACAGCAAACAGATGCAGCGATTCAACGTTGGAGAGGACTGTCCGGTGTTTGACGGTCTGTTTGAGTTTTGCCAGCTCTCAGCAGGTGGATCTGTTGCTGGGGCGTTGAAGTTGAACAAGCAGCAGACGGATATCGCCATCAACTGGGCCGGCGGACTCCACCACGCCAAGAAGTCCGAGGCCTCGGGTTTCTGCTACGTCAACGACATCGTCCTGGCCATTCTGGAGCTGCTAAAGTACCACCAGAGGGTGTTGTACATCGACATTGACATCCACCACGGGGATGGCGTGGAGGAGGCCTTCTACACGACGGACAGGGTCATGACCGTCTCCTTCCACAAGTACGGGGAGTACTTCCCCGGCACCGGAGACCTGAGGGACATCGGCGCCGGAAAGGGCAAATACTACGCGGTGAACTACCCGCTGAGGGACGGCATCGACGACGAGTCCTACGAAGCCATCTTCAAACCCATCATGGCTAAAGTCATGGAGATGTACCAGCCCAGCGCGGTGGTCCTCCAGTGTGGAGCCGATTCTCTCTCTGGAGACCGACTGGGCTGCTTCAACCTCACCATCAAAGGCCACGCCAAATGTGTGGAGTACATCAAAAGCTTCAACCTGCCCCTGCTGATGCTGGGCGGCGGGGGCTACACCATCCGCAACGTGGCCCGTTGCTGGACGTACGAGACGGCGGTGGCCCTGGACTCGTCCATCCCCAACGAGCTGCCCTACAACGACTACTTCGAGTACTTCGGGCCCGACTTCAAGCTGCACATCAGCCCGTCCAACATGACCAACCAGAACACTAACGAGTACCTGGAGAAGATCAAGCAGCGCCTGTTCGAGAACCTCCGCATGCTGCCGCACGCGCCGGGCGTCCAGATGCAGGCCATCCCCGAGGACGCCCCCCACCCGGACAGCGGCGAGGAGGACGAGGAGGAGCCCGACAAGCGCGTCTCCATCCGGGCACACGACAAAAGGATCGCCTGCGAGGAAGAGTTCTCTGACTCGGAGGACGAGGCGGAGGGGCAGGGGGGCGGCCGCAGGAACGCAGCCAACCAC
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
