WERAM Information


Tag Content
WERAM ID WERAM-Prc-0059
Ensembl Protein ID ENSPCAP00000005589.1
Gene Name HDAC1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPCAG00000005995.1 ENSPCAT00000005987.1 ENSPCAP00000005589.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.70e-158 526.8 1 303
Organism Procavia capensis
Domain Profile
  HDAC Class-I

           class-1.txt  10 dvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdgl 98 
dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+a+e++k+h nvgedcPvfdgl
ENSPCAP00000005589.1 1 DVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANADEMTKYHXXXXXXXXXXXXXXXXXXXXXXXXXXNVGEDCPVFDGL 89
69****************************************************999999999999999999***************** PP
class-1.txt 99 feycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmt 187
fe+cql+tG+s+++a kLnk+++dia+nwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveeafyttdrvmt
ENSPCAP00000005589.1 90 FEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMT 178
***************************************************************************************** PP
class-1.txt 188 vsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae 276
vsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+if++viskv+e+f+P+avvlqcG+Dsl+gDrlg+fnl+ikgha+
ENSPCAP00000005589.1 179 VSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFRPVISKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAK 266
********.******************************************************************************** PP
class-1.txt 277 cvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
cv+fv++fnlp+l+lGGGGYt+rnvaRcwtyetav+l
ENSPCAP00000005589.1 267 CVEFVRNFNLPMLMLGGGGYTIRNVARCWTYETAVAL 303
**********************************975 PP

Protein Sequence
(Fasta)
DVGNYYYGQG HPMKPHRIRM THNLLLNYGL YRKMEIYRPH KANADEMTKY HXXXXXXXXX 60
XXXXXXXXXX XXXXXXXNVG EDCPVFDGLF EFCQLSTGGS VASAVKLNKQ QTDIAVNWAG 120
GLHHAKKSEA SGFCYVNDIV LAILELLKYH QRVLYIDIDI HHGDGVEEAF YTTDRVMTVS 180
FHKYGEYFPG TGDLRDIGAG KGKYYAVNYP LRDGIDDESY EAIFRPVISK VMEMFQPSAV 240
VLQCGSDSLS GDRLGCFNLT IKGHAKCVEF VRNFNLPMLM LGGGGYTIRN VARCWTYETA 300
VALSTDIPNE LPYNDYFEYF GPDFKLHISP SNMTNQNTNE YLEKIKQRLF ENLRMLPHAP 360
GVQMQAIPED AIPEESGDDD EEDPDKRISI CSSDKRIACE EEFSDSDEEG EGGRKNSSNF 420
KKAKRVKTED EKEKDPEEKK EVTEEEKTKE EKPEAKGAKE EVKLA 465
Nucleotide Sequence
(Fasta)
GATGTTGGAA ATTATTATTA TGGACAAGGT CACCCAATGA AGCCCCACCG AATCCGCATG 60
ACTCACAATT TGCTGCTCAA CTATGGTCTC TACCGAAAGA TGGAAATCTA TCGCCCTCAC 120
AAAGCCAACG CTGATGAGAT GACCAAATAT CACNNNNNNN NNNNNNNNNN NNNNNNNNNN 180
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNT CAACGTTGGA 240
GAGGACTGTC CAGTATTTGA TGGCCTCTTT GAGTTCTGTC AGTTGTCTAC TGGTGGCTCC 300
GTGGCAAGTG CTGTGAAACT TAATAAGCAG CAGACGGACA TCGCTGTGAA TTGGGCAGGG 360
GGCCTGCACC ATGCAAAGAA GTCCGAGGCA TCTGGCTTCT GTTACGTCAA CGATATCGTC 420
TTGGCCATCC TGGAACTGCT CAAGTATCAC CAGAGGGTGC TGTATATTGA CATTGATATT 480
CACCATGGTG ATGGCGTGGA AGAGGCCTTC TATACCACAG ACCGGGTCAT GACTGTGTCC 540
TTTCATAAGT ATGGAGAGTA CTTCCCAGGA ACAGGGGACT TACGGGATAT TGGCGCTGGC 600
AAAGGCAAGT ATTACGCTGT TAACTACCCG CTCCGAGATG GCATTGATGA TGAGTCCTAT 660
GAGGCCATTT TCAGGCCGGT CATATCCAAA GTAATGGAGA TGTTCCAGCC TAGTGCAGTG 720
GTCTTACAGT GTGGCTCTGA CTCCCTTTCT GGGGATCGAT TGGGTTGTTT CAACCTGACC 780
ATCAAAGGGC ATGCCAAGTG TGTGGAATTT GTGAGGAATT TCAACCTTCC GATGCTGATG 840
CTGGGAGGCG GTGGCTACAC CATTCGTAAT GTCGCCAGGT GCTGGACATA TGAAACAGCT 900
GTGGCCCTGA GCACAGATAT TCCCAATGAG CTTCCATACA ACGACTACTT TGAATACTTC 960
GGACCAGATT TCAAACTTCA CATCAGTCCT TCCAACATGA CCAATCAGAA CACTAATGAG 1020
TACTTGGAGA AGATCAAACA GAGACTGTTT GAAAACCTGA GAATGTTGCC CCATGCACCC 1080
GGAGTCCAAA TGCAGGCAAT TCCTGAGGAC GCCATCCCAG AGGAGAGTGG TGATGATGAT 1140
GAAGAGGACC CTGACAAACG TATCTCCATC TGTTCCTCTG ACAAACGAAT TGCTTGTGAA 1200
GAAGAGTTCT CTGACTCTGA TGAGGAAGGA GAGGGTGGAC GCAAGAACTC TTCCAACTTC 1260
AAAAAAGCCA AGCGAGTTAA AACAGAGGAT GAGAAAGAGA AAGACCCAGA AGAGAAGAAA 1320
GAAGTCACCG AAGAAGAAAA AACCAAGGAG GAGAAGCCAG AAGCCAAAGG GGCCAAGGAG 1380
GAGGTCAAGT TGGCCTGA 1399
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 93 0.0 762
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 92 0.0 757
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 92 0.0 757
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 92 0.0 756
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 92 0.0 756
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 92 0.0 756
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 92 0.0 756
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 92 0.0 756
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 92 0.0 756
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 92 0.0 756
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 92 0.0 756
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 92 0.0 756
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 92 0.0 755
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 92 0.0 755
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 92 0.0 755
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 92 0.0 755
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 92 0.0 754
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 92 0.0 754
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 92 0.0 751
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 91 0.0 749
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 92 0.0 749
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 91 0.0 748
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 91 0.0 743
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 89 0.0 741
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 88 0.0 738
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 88 0.0 735
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 88 0.0 735
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 88 0.0 734
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 92 0.0 728
WERAM-Mod-0160 ENSMODP00000021783.2 Monodelphis domestica 89 0.0 724
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 87 0.0 716
WERAM-Fia-0005 ENSFALP00000000658.1 Ficedula albicollis 87 0.0 712
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 86 0.0 709
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 86 0.0 707
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 85 0.0 701
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 85 0.0 699
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 85 0.0 699
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 85 0.0 697
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 84 0.0 697
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 85 0.0 696
WERAM-Orla-0192 ENSORLP00000021872.1 Oryzias latipes 85 0.0 691
WERAM-Xim-0229 ENSXMAP00000019038.1 Xiphophorus maculatus 84 0.0 689
WERAM-Pof-0034 ENSPFOP00000002952.2 Poecilia formosa 84 0.0 689
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 84 0.0 688
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 84 0.0 687
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 84 0.0 686
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 84 0.0 686
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 84 0.0 686
WERAM-Ten-0200 ENSTNIP00000020022.1 Tetraodon nigroviridis 86 0.0 683
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 84 0.0 683
WERAM-Mam-0083 ENSMMUP00000013015.2 Macaca mulatta 91 0.0 676
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 82 0.0 667
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 77 0.0 667
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 84 0.0 660
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 84 0.0 658
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 82 0.0 650
WERAM-Mim-0092 ENSMICP00000008598.1 Microcebus murinus 92 0.0 650
WERAM-Dio-0132 ENSDORP00000012520.1 Dipodomys ordii 78 9e-178 620
WERAM-Mae-0030 ENSMEUP00000002192.1 Macropus eugenii 79 3e-175 612
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 75 3e-174 608
WERAM-Pem-0096 ENSPMAP00000010023.1 Petromyzon marinus 74 3e-165 578
WERAM-Tub-0143 ENSTBEP00000015305.1 Tupaia belangeri 81 2e-162 569
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 66 4e-157 551
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 66 7e-156 547
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 66 9e-155 544
WERAM-Chh-0102 ENSCHOP00000011659.1 Choloepus hoffmanni 77 2e-154 543
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 65 3e-154 542
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 65 4e-154 541
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 65 5e-154 541
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 66 5e-154 541
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 66 5e-154 541
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 66 1e-153 540
WERAM-Coi-0024 EAS33504 Coccidioides immitis 65 2e-152 536
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 65 2e-152 536
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 66 2e-151 533
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 66 3e-151 532
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 66 4e-151 531
WERAM-Amt-0072 ERN20455 Amborella trichopoda 64 4e-151 531
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 64 4e-150 528
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 65 4e-150 528
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 65 4e-150 528
WERAM-Prp-0060 EMJ10303 Prunus persica 65 7e-150 528
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 65 2e-149 526
WERAM-Ved-0020 EGY15146 Verticillium dahliae 63 4e-149 525
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 64 4e-149 525
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 66 8e-149 524
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 66 2e-148 523
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 66 2e-148 523
WERAM-Trv-0003 EHK19072 Trichoderma virens 65 2e-148 522
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 66 2e-148 522
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 66 3e-148 522
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 66 4e-148 521
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 64 4e-148 521
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 66 5e-148 521
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 66 5e-148 521
WERAM-Caa-0018 KGT69072 Candida albicans 63 5e-148 521
WERAM-Thc-0029 EOY20838 Theobroma cacao 64 6e-148 521
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 64 7e-148 521
WERAM-Brr-0180 Bra035858.1-P Brassica rapa 64 8e-148 520
WERAM-Sol-0082 Solyc06g071680.2.1 Solanum lycopersicum 64 9e-148 520
WERAM-Bro-0056 Bo3g104750.1 Brassica oleracea 64 1e-147 520
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 63 2e-147 520
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 66 2e-147 519
WERAM-Pot-0149 POPTR_0015s09400.1 Populus trichocarpa 64 2e-147 519
WERAM-Met-0084 KEH36404 Medicago truncatula 66 3e-147 519
WERAM-Sei-0026 Si006243m Setaria italica 66 3e-147 518
WERAM-Kop-0004 CAY67954 Komagataella pastoris 64 4e-147 518
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 66 8e-147 517
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 66 9e-147 517
WERAM-Cag-0003 CAG57932 Candida glabrata 64 9e-147 517
WERAM-Trr-0017 EGR48353 Trichoderma reesei 65 9e-147 517
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 63 2e-146 516
WERAM-Asg-0034 AAS54885 Ashbya gossypii 63 2e-146 516
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 65 6e-146 514
WERAM-Aet-0051 EMT16627 Aegilops tauschii 65 7e-146 514
WERAM-Soa-0003 ENSSARP00000000316.1 Sorex araneus 73 1e-145 513
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 60 3e-145 512
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 65 4e-145 512
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 63 1e-144 510
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 61 1e-144 510
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 64 3e-144 508
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 64 8e-144 507
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 61 2e-143 506
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 62 5e-143 504
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 63 7e-143 504
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 61 1e-142 503
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 64 6e-142 501
Created Date 25-Jun-2016