WERAM Information

Tag Content
WERAM ID WERAM-Aim-0087
Ensembl Protein ID ENSAMEP00000008076.1
Gene Name HDAC1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSAMEG00000007608.1 ENSAMET00000008411.1 ENSAMEP00000008076.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.80e-173 576.4 9 323
Organism Ailuropoda melanoleuca
Domain Profile
  HDAC Class-I
           class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 
                           +kv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+aee++k+hs++yi+fl++++p+n++e+sk++++fnvg
  ENSAMEP00000008076.1   9 RKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 97 
                           589************************************************************************************** PP
           class-1.txt  90 edcPvfdglfeycqlitGasle..aakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgve 176
                           edcPvfdglfe+cql+tG+s++  +a kLnk+++dia+nwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgve
  ENSAMEP00000008076.1  98 EDCPVFDGLFEFCQLSTGGSVDpaSAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVE 186
                           *********************7336789************************************************************* PP
           class-1.txt 177 eafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlg 265
                           eafyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+ifk+viskv+e+f+P+avvlqcG+Dsl+gDrlg
  ENSAMEP00000008076.1 187 EAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMEMFQPSAVVLQCGSDSLSGDRLG 274
                           *******************.********************************************************************* PP
           class-1.txt 266 efnlsik.ghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                           +fnl+ik gha+cv+fvksfnlp+l+lGGGGYt+rnvaRcwtyetav+l
  ENSAMEP00000008076.1 275 CFNLTIKeGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVAL 323
                           *****9669*************************************987 PP
Protein Sequence
(Fasta)		MAQTQGTRRK VCYYYDGDVG NYYYGQGHPM KPHRIRMTHN LLLNYGLYRK MEIYRPHKAN 60
AEEMTKYHSD DYIKFLRSIR PDNMSEYSKQ MQRFNVGEDC PVFDGLFEFC QLSTGGSVDP 120
ASAVKLNKQQ TDIAVNWAGG LHHAKKSEAS GFCYVNDIVL AILELLKYHQ RVLYIDIDIH 180
HGDGVEEAFY TTDRVMTVSF HKYGEYFPGT GDLRDIGAGK GKYYAVNYPL RDGIDDESYE 240
AIFKPVISKV MEMFQPSAVV LQCGSDSLSG DRLGCFNLTI KEGHAKCVEF VKSFNLPMLM 300
LGGGGYTIRN VARCWTYETA VALDTEIPNE LPYNDYFEYF GPDFKLHISP SNMTNQNTNE 360
YLEKIKQRLF ENLRMLPHAP GVQMQVIPED AIPEESGDED EEDPDKRISI CSSDKRIACE 420
EEFSDSDEEG EGGRKNASNF KKAKRVKTED EKEKDPEEKK EVTEEEKTKE EKQEAKGVKE 480
EVKLA 485
Nucleotide Sequence
(Fasta)		ATGGCGCAGA CTCAGGGCAC TAGGAGGAAA GTCTGTTACT ACTACGACGG GGATGTTGGA 60
AATTACTACT ATGGACAAGG CCACCCAATG AAGCCTCACC GAATCCGCAT GACTCACAAT 120
TTGCTACTTA ACTATGGTCT CTACCGAAAA ATGGAAATCT ATCGCCCTCA CAAAGCCAAT 180
GCTGAGGAGA TGACCAAGTA CCACAGTGAC GACTACATTA AATTCCTGCG CTCCATCCGC 240
CCAGATAACA TGTCCGAGTA CAGCAAGCAG ATGCAGAGAT TCAACGTCGG TGAGGACTGT 300
CCAGTATTTG ATGGCCTGTT TGAATTCTGT CAGTTATCTA CTGGAGGCTC TGTGGACCCA 360
GCGAGTGCTG TGAAACTGAA TAAGCAGCAG ACGGACATCG CTGTGAATTG GGCCGGGGGC 420
CTGCACCATG CAAAGAAGTC TGAGGCATCC GGCTTCTGTT ACGTCAATGA TATCGTCTTG 480
GCCATCCTGG AACTGCTAAA GTATCACCAG AGGGTGCTGT ATATTGACAT TGATATTCAC 540
CACGGCGATG GCGTGGAAGA GGCCTTCTAT ACCACAGACC GGGTCATGAC TGTGTCCTTT 600
CATAAATACG GAGAGTACTT CCCAGGAACT GGGGACCTAC GGGACATTGG GGCTGGCAAA 660
GGCAAGTATT ACGCTGTTAA CTACCCGCTC CGAGATGGGA TCGATGACGA GTCCTATGAG 720
GCCATTTTCA AGCCGGTCAT ATCTAAAGTG ATGGAGATGT TCCAGCCCAG TGCGGTTGTC 780
TTACAGTGTG GCTCTGACTC CCTGTCTGGG GATCGGTTAG GTTGCTTCAA TCTGACCATC 840
AAAGAAGGGC ATGCCAAGTG TGTGGAGTTT GTGAAGAGCT TCAACCTGCC TATGCTAATG 900
CTGGGCGGAG GTGGCTACAC CATCCGTAAC GTGGCCCGCT GCTGGACGTA CGAAACGGCA 960
GTGGCCCTGG ACACAGAAAT CCCAAATGAG CTTCCGTACA ACGACTACTT CGAATACTTT 1020
GGGCCAGATT TCAAACTTCA CATCAGTCCT TCCAATATGA CCAACCAGAA TACCAATGAA 1080
TACCTGGAGA AGATCAAACA GCGACTGTTT GAGAACCTGA GAATGCTGCC CCACGCACCT 1140
GGGGTCCAAA TGCAGGTGAT TCCTGAGGAT GCCATTCCAG AGGAGAGTGG CGACGAGGAC 1200
GAAGAAGACC CTGACAAGCG CATCTCGATC TGTTCTTCTG ACAAGCGAAT TGCATGTGAG 1260
GAAGAGTTCT CAGACTCTGA TGAGGAGGGA GAAGGTGGAC GCAAGAACGC TTCCAACTTC 1320
AAAAAAGCCA AGAGAGTCAA AACTGAGGAC GAAAAAGAGA AAGACCCAGA AGAGAAGAAA 1380
GAAGTCACAG AAGAGGAGAA AACCAAGGAG GAGAAGCAAG AAGCCAAAGG GGTCAAGGAG 1440
GAGGTCAAGT TGGCTTGA 1459
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 99 0.0 827
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 99 0.0 822
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 99 0.0 822
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 98 0.0 820
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 98 0.0 820
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 98 0.0 820
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 99 0.0 820
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 98 0.0 819
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 98 0.0 819
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 99 0.0 818
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 98 0.0 818
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 99 0.0 818
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 99 0.0 818
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 98 0.0 817
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 98 0.0 816
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 98 0.0 814
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 98 0.0 813
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 97 0.0 810
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 99 0.0 806
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 98 0.0 803
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 98 0.0 801
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 98 0.0 800
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 99 0.0 798
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 95 0.0 798
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 95 0.0 795
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 94 0.0 790
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 95 0.0 782
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 95 0.0 777
WERAM-Fia-0005 ENSFALP00000000658.1 Ficedula albicollis 95 0.0 776
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 91 0.0 773
WERAM-Mod-0160 ENSMODP00000021783.2 Monodelphis domestica 93 0.0 763
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 92 0.0 761
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 93 0.0 760
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 91 0.0 748
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 91 0.0 747
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 91 0.0 746
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 92 0.0 745
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 91 0.0 745
WERAM-Mam-0083 ENSMMUP00000013015.2 Macaca mulatta 98 0.0 744
WERAM-Tut-0018 ENSTTRP00000001520.1 Tursiops truncatus 99 0.0 743
WERAM-Orla-0192 ENSORLP00000021872.1 Oryzias latipes 91 0.0 741
WERAM-Xim-0229 ENSXMAP00000019038.1 Xiphophorus maculatus 90 0.0 739
WERAM-Pof-0034 ENSPFOP00000002952.2 Poecilia formosa 90 0.0 739
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 90 0.0 738
WERAM-Ten-0200 ENSTNIP00000020022.1 Tetraodon nigroviridis 92 0.0 731
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 89 0.0 729
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 89 0.0 729
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 91 0.0 728
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 89 0.0 727
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 90 0.0 726
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 90 0.0 726
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 90 0.0 721
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 90 0.0 718
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 89 0.0 707
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 81 0.0 697
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 88 0.0 696
WERAM-Dio-0132 ENSDORP00000012520.1 Dipodomys ordii 84 0.0 659
WERAM-Mae-0030 ENSMEUP00000002192.1 Macropus eugenii 85 0.0 650
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 81 0.0 650
WERAM-Mim-0092 ENSMICP00000008598.1 Microcebus murinus 87 0.0 646
WERAM-Tub-0143 ENSTBEP00000015305.1 Tupaia belangeri 90 0.0 632
WERAM-Pem-0096 ENSPMAP00000010023.1 Petromyzon marinus 80 4e-178 621
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 70 7e-163 570
WERAM-Soa-0003 ENSSARP00000000316.1 Sorex araneus 77 2e-162 569
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 69 3e-162 569
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 68 1e-160 563
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 68 2e-160 562
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 68 4e-160 561
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 68 4e-160 561
WERAM-Coi-0024 EAS33504 Coccidioides immitis 68 1e-159 560
WERAM-Chh-0084 ENSCHOP00000009394.1 Choloepus hoffmanni 72 3e-159 558
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 69 1e-158 556
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 69 3e-158 555
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 67 6e-158 554
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 69 4e-157 551
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 68 6e-157 551
WERAM-Ved-0020 EGY15146 Verticillium dahliae 67 9e-157 550
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 67 1e-156 550
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 67 3e-156 549
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 68 8e-156 547
WERAM-Trv-0003 EHK19072 Trichoderma virens 68 3e-155 545
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 68 4e-155 545
WERAM-Amt-0072 ERN20455 Amborella trichopoda 66 9e-155 544
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 67 1e-154 543
WERAM-Prp-0060 EMJ10303 Prunus persica 67 1e-154 543
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 68 2e-154 543
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 67 3e-154 542
WERAM-Trr-0017 EGR48353 Trichoderma reesei 68 9e-154 540
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 67 1e-153 540
WERAM-Thc-0029 EOY20838 Theobroma cacao 66 3e-153 538
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 68 4e-153 538
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 66 4e-153 538
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 68 5e-153 538
WERAM-Caa-0018 KGT69072 Candida albicans 65 5e-153 538
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 68 5e-153 538
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 68 7e-153 538
WERAM-Met-0084 KEH36404 Medicago truncatula 69 1e-152 537
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 68 1e-152 537
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 69 2e-152 536
WERAM-Kop-0004 CAY67954 Komagataella pastoris 66 2e-152 536
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 68 2e-152 536
WERAM-Brr-0180 Bra035858.1-P Brassica rapa 66 3e-152 535
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 65 3e-152 535
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 66 5e-152 535
WERAM-Cag-0003 CAG57932 Candida glabrata 66 5e-152 535
WERAM-Bro-0169 Bo9g017510.1 Brassica oleracea 66 7e-152 534
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 69 1e-151 533
WERAM-Sei-0026 Si006243m Setaria italica 68 2e-151 533
WERAM-Pot-0149 POPTR_0015s09400.1 Populus trichocarpa 66 2e-151 533
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 68 3e-151 532
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 68 3e-151 532
WERAM-Asg-0034 AAS54885 Ashbya gossypii 65 3e-151 532
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 68 4e-151 531
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 62 6e-151 531
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 66 7e-151 531
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 65 2e-150 530
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 65 2e-150 530
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 68 2e-150 529
WERAM-Sol-0082 Solyc06g071680.2.1 Solanum lycopersicum 65 5e-150 528
WERAM-Aet-0051 EMT16627 Aegilops tauschii 67 7e-150 528
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 68 1e-149 527
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 65 2e-149 526
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 67 4e-149 525
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 66 3e-148 522
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 67 4e-148 522
WERAM-Pytr-0033 EDU43668 Pyrenophora triticirepentis 66 1e-147 520
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 64 2e-147 520
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 64 3e-147 519
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 61 2e-146 516
Created Date 25-Jun-2016