| Tag |
Content |
| WERAM ID |
WERAM-Sus-0028 |
| Ensembl Protein ID |
ENSSSCP00000004781.2 |
| Gene Name |
HDAC2 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
6.10e-175 |
581.5 |
72 |
383 |
|
| Organism |
Sus scrofa |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89
kkv+y+yd d+g+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+aee++k+hs+eyi+fl++++p+n++e+sk++++fnvg
ENSSSCP00000004781.2 72 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVG 160
589************************************************************************************** PP
class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
edcPvfdglfe+cql+tG+s+++a kLn++++d+a+nwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea
ENSSSCP00000004781.2 161 EDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 249
***************************************************************************************** PP
class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+P++dgidDesy +ifk++iskv+e+++P+avvlqcGaDsl+gDrlg+f
ENSSSCP00000004781.2 250 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCF 337
*****************.*********************************************************************** PP
class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
nl++kgha+cv++vk+fnlpll+lGGGGYt+rnvaRcwtyetav+l
ENSSSCP00000004781.2 338 NLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVAL 383
*******************************************987 PP
|
Protein Sequence
(Fasta) | AGRYRALPAP PPRLPLACLS PQDCQFNLHP SPFLSAPSRG GSSSSSRSPS PEAAAAAVAG 60
EPMAYSQGGG KKKVCYYYDG DIGNYYYGQG HPMKPHRIRM THNLLLNYGL YRKMEIYRPH 120
KATAEEMTKY HSDEYIKFLR SIRPDNMSEY SKQMQRFNVG EDCPVFDGLF EFCQLSTGGS 180
VAGAVKLNRQ QTDMAVNWAG GLHHAKKSEA SGFCYVNDIV LAILELLKYH QRVLYIDIDI 240
HHGDGVEEAF YTTDRVMTVS FHKYGEYFPG TGDLRDIGAG KGKYYAVNFP MRDGIDDESY 300
GQIFKPIISK VMEMYQPSAV VLQCGADSLS GDRLGCFNLT VKGHAKCVEV VKTFNLPLLM 360
LGGGGYTIRN VARCWTYETA VALDCEIPNE LPYNDYFEYF GPDFKLHISP SNMTNQNTPE 420
YMEKIKQRLF ENLRMLPHAP GVQMQAIPED AVHEDSGDED GEDPDKRISI RASDKRIACD 480
EEFSDSEDEG EGGRRNVADH KKGAKKARIE EDKKETEDKK ADVKEEDKSK DNSGEKTDTK 540
GAKSEQLSNP Protein Fasta Sequence
>ENSSSCP00000004781.2|Class-I|Sus scrofa
AGRYRALPAPPPRLPLACLSPQDCQFNLHPSPFLSAPSRGGSSSSSRSPSPEAAAAAVAGEPMAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDNSGEKTDTKGAKSEQLSNP |
Nucleotide Sequence
(Fasta) | CATTAGGAGG CCTCTTTACC CAGGACTGAA GAGGCCTCTT TCTCGGGTCG TGTCCCCTCT 60
TCCCCCGTGG AGTCGCAGTG GATGCATCCC ACCTCCCCTC GGCCTCCGGA GGTGGTTTGG 120
CTGCCCCCTC CCCCTCCCCA GTGTCGCGAG TTGGCGCCGC TGCCACCCCC CGGTCCGCGC 180
TCTCGGCCCC TCGGCCGGGC GGTACCGAGC CCTCCCGGCA CCCCCTCCTC GCCTCCCTCT 240
GGCCTGCCTT TCCCCGCAGG ACTGCCAGTT CAACCTTCAC CCCAGCCCTT TTCTTTCGGC 300
GCCGAGCCGC GGCGGCAGCA GCAGCAGCAG CAGGAGTCCG AGCCCGGAGG CGGCGGCGGC 360
GGCGGTGGCC GGGGAGCCCA TGGCGTACAG TCAGGGAGGC GGCAAGAAGA AAGTCTGCTA 420
CTACTATGAT GGTGATATTG GAAATTATTA TTATGGACAG GGTCACCCCA TGAAACCTCA 480
TAGAATCCGC ATGACGCATA ACTTGCTGCT AAATTATGGC TTATATAGAA AGATGGAAAT 540
ATATAGGCCC CATAAAGCCA CTGCTGAAGA AATGACAAAA TACCACAGTG ATGAATACAT 600
CAAATTTCTG CGTTCAATAA GGCCAGATAA CATGTCTGAG TATAGTAAGC AGATGCAGAG 660
ATTTAATGTT GGAGAGGATT GTCCAGTCTT TGATGGACTC TTTGAATTTT GTCAGCTTTC 720
AACTGGTGGC TCAGTTGCTG GGGCTGTGAA GTTAAACCGA CAACAAACTG ATATGGCTGT 780
TAACTGGGCT GGAGGATTAC ACCATGCTAA GAAATCAGAA GCATCAGGAT TCTGTTATGT 840
TAATGATATT GTGCTTGCCA TCCTTGAGTT ACTAAAGTAT CATCAGAGAG TCTTATATAT 900
TGATATTGAT ATCCATCATG GTGATGGTGT TGAAGAAGCT TTTTATACAA CAGATCGTGT 960
AATGACTGTA TCATTCCATA AATATGGGGA ATACTTTCCT GGAACAGGAG ACTTGAGGGA 1020
TATTGGTGCA GGAAAAGGCA AATACTATGC TGTCAATTTT CCAATGAGAG ATGGTATAGA 1080
TGATGAATCA TATGGGCAGA TATTTAAACC TATTATCTCA AAAGTGATGG AGATGTATCA 1140
ACCTAGTGCT GTGGTGTTAC AATGTGGTGC TGACTCATTA TCTGGTGATA GACTTGGTTG 1200
CTTCAATCTG ACAGTCAAAG GTCACGCTAA ATGTGTGGAA GTTGTAAAAA CTTTCAATTT 1260
ACCGTTATTA ATGCTGGGAG GAGGTGGATA CACAATCCGT AATGTTGCTC GATGTTGGAC 1320
ATATGAGACC GCAGTCGCCC TTGATTGTGA GATTCCCAAT GAATTGCCAT ATAATGATTA 1380
CTTTGAGTAT TTTGGACCGG ACTTCAAGCT GCATATTAGT CCTTCAAACA TGACAAACCA 1440
GAACACTCCA GAATATATGG AAAAGATAAA ACAGCGTTTA TTTGAAAATT TACGCATGTT 1500
GCCTCATGCA CCTGGTGTCC AAATGCAAGC TATTCCAGAA GATGCAGTTC ATGAAGACAG 1560
TGGAGATGAA GATGGAGAAG ATCCAGACAA GAGAATTTCT ATTCGAGCAT CAGACAAACG 1620
GATAGCGTGT GATGAAGAAT TCTCAGATTC AGAGGACGAA GGGGAAGGAG GCCGTAGAAA 1680
TGTGGCTGAT CATAAGAAAG GAGCAAAGAA AGCTAGAATT GAAGAAGACA AGAAGGAAAC 1740
AGAGGACAAA AAAGCAGATG TTAAGGAAGA AGATAAATCC AAGGACAATA GTGGTGAAAA 1800
AACAGATACC AAAGGAGCCA AATCAGAACA GCTCAGCAAC CCTTGAATTT GAGAGTTTCA 1860
CCAATTTCAG AAACCACAAA AAAGTGAGAA AATATTGGGA AGAAAAATGT TTTCTTTTTG 1920
AAGACATCTG GCTTCGTTTT ATACTACTTT GGCATGGACT GTATTTATTT TCAAAATTGC 1980
TTTTTTTGTT TTTGTTTTTC TTGGCAAGTT TTATTGTGAG TTTTCTAATT ATGAAGCAAA 2040
ATTTCTTTTC TCCACCATGC TTTATGTGAT AGTATTTAAA ATTGATGTGC ATTATTATGT 2100
CAAAAACCTG ATCTATTAAA GAAGTAATTG GCCTTTCTGA GCTGATTTTT CCATCTTTTG 2160
TAATTATCTT TATTAAAAAA TTGTACTTGG ATTGTCTTTT GTCTGTTTAT TACAACATGG 2220
AGTCTTTTCT CATAAGCTAG TGACATGATC TTTTCTTTAG AAATAGAATA CACTATAGGT 2280
GAACGATACT GATTACAGCT TCAAAAACAT GCAACATCGT TTCTTCAGCA AAGAGTATTT 2340
TCCATATTGT TATTTCTTAG TATCATAGGA GTTGTGCCGT CTTGTCCTTT ATAGGTTAAC 2400
TGGTTAATAT TGAAGATTGA TATCTCATTA TCATAATTTA TCTCTGAAAT TAATGATACA 2460
AGCTATGCAA TTGAGATATA GGAGTTATCT TTGAGCTGAA CCAAAGAGTC AAAAAATTGA 2520
AAATGGAAAT TGAGTTGAAA AAAGAAATCT ATAATCAGAG GAGGAAACTA GCTATACGTG 2580
ACTTTTGCCA TCCCTACGTA TATACCAAGT AGACAAGGAG TTGTATGGTT GTATTTGATC 2640
AGAGGAACCT TTCTGTATTT ATAGTAAGTC TAAAATAAAA ACCTGCTGCT TGGAGAAAAC 2700
CTGGTTCTTC TACTGCATTC TCATGATATT TGGGTTCCAT TATTACACCC AGGTTTTCAA 2760
ACCAAGGGAA TAAACACTCA AAGTCATTTA TCATTCAATT TATTGATTGT TTTAAGGCTT 2820
TGTGCAACTG ACTGTAATGG AAATTGTATG GCTGCTCCCA GAGCTTTGCA TCCTGATGGT 2880
AGAAAGAAGA TAAATGGCGT GATTTCTACT ACTAAGATAA GGGAAGCAAT TTTTTTGAGA 2940
AACTTGCTGA AATCAGTGAA CTCTCTCAGC CAAGCCCAAA TTGATTATTT TGAGATTAAA 3000
AAAATGTTTC TTTAAAAGCC CCTGTGTTAC AACATACTTC AGACATTTAC TACAGCACCT 3060
GGGCTTTTGT AGTGAACAGC CATTTTCCCA CCTGTATTTA ATTGATGCTT CACTTTTGTC 3120
TTAT
3125Nucleotide Fasta Sequence
>ENSSSCP00000004781.2|Class-I|Sus scrofa
CATTAGGAGGCCTCTTTACCCAGGACTGAAGAGGCCTCTTTCTCGGGTCGTGTCCCCTCTTCCCCCGTGGAGTCGCAGTGGATGCATCCCACCTCCCCTCGGCCTCCGGAGGTGGTTTGGCTGCCCCCTCCCCCTCCCCAGTGTCGCGAGTTGGCGCCGCTGCCACCCCCCGGTCCGCGCTCTCGGCCCCTCGGCCGGGCGGTACCGAGCCCTCCCGGCACCCCCTCCTCGCCTCCCTCTGGCCTGCCTTTCCCCGCAGGACTGCCAGTTCAACCTTCACCCCAGCCCTTTTCTTTCGGCGCCGAGCCGCGGCGGCAGCAGCAGCAGCAGCAGGAGTCCGAGCCCGGAGGCGGCGGCGGCGGCGGTGGCCGGGGAGCCCATGGCGTACAGTCAGGGAGGCGGCAAGAAGAAAGTCTGCTACTACTATGATGGTGATATTGGAAATTATTATTATGGACAGGGTCACCCCATGAAACCTCATAGAATCCGCATGACGCATAACTTGCTGCTAAATTATGGCTTATATAGAAAGATGGAAATATATAGGCCCCATAAAGCCACTGCTGAAGAAATGACAAAATACCACAGTGATGAATACATCAAATTTCTGCGTTCAATAAGGCCAGATAACATGTCTGAGTATAGTAAGCAGATGCAGAGATTTAATGTTGGAGAGGATTGTCCAGTCTTTGATGGACTCTTTGAATTTTGTCAGCTTTCAACTGGTGGCTCAGTTGCTGGGGCTGTGAAGTTAAACCGACAACAAACTGATATGGCTGTTAACTGGGCTGGAGGATTACACCATGCTAAGAAATCAGAAGCATCAGGATTCTGTTATGTTAATGATATTGTGCTTGCCATCCTTGAGTTACTAAAGTATCATCAGAGAGTCTTATATATTGATATTGATATCCATCATGGTGATGGTGTTGAAGAAGCTTTTTATACAACAGATCGTGTAATGACTGTATCATTCCATAAATATGGGGAATACTTTCCTGGAACAGGAGACTTGAGGGATATTGGTGCAGGAAAAGGCAAATACTATGCTGTCAATTTTCCAATGAGAGATGGTATAGATGATGAATCATATGGGCAGATATTTAAACCTATTATCTCAAAAGTGATGGAGATGTATCAACCTAGTGCTGTGGTGTTACAATGTGGTGCTGACTCATTATCTGGTGATAGACTTGGTTGCTTCAATCTGACAGTCAAAGGTCACGCTAAATGTGTGGAAGTTGTAAAAACTTTCAATTTACCGTTATTAATGCTGGGAGGAGGTGGATACACAATCCGTAATGTTGCTCGATGTTGGACATATGAGACCGCAGTCGCCCTTGATTGTGAGATTCCCAATGAATTGCCATATAATGATTACTTTGAGTATTTTGGACCGGACTTCAAGCTGCATATTAGTCCTTCAAACATGACAAACCAGAACACTCCAGAATATATGGAAAAGATAAAACAGCGTTTATTTGAAAATTTACGCATGTTGCCTCATGCACCTGGTGTCCAAATGCAAGCTATTCCAGAAGATGCAGTTCATGAAGACAGTGGAGATGAAGATGGAGAAGATCCAGACAAGAGAATTTCTATTCGAGCATCAGACAAACGGATAGCGTGTGATGAAGAATTCTCAGATTCAGAGGACGAAGGGGAAGGAGGCCGTAGAAATGTGGCTGATCATAAGAAAGGAGCAAAGAAAGCTAGAATTGAAGAAGACAAGAAGGAAACAGAGGACAAAAAAGCAGATGTTAAGGAAGAAGATAAATCCAAGGACAATAGTGGTGAAAAAACAGATACCAAAGGAGCCAAATCAGAACAGCTCAGCAACCCTTGAATTTGAGAGTTTCACCAATTTCAGAAACCACAAAAAAGTGAGAAAATATTGGGAAGAAAAATGTTTTCTTTTTGAAGACATCTGGCTTCGTTTTATACTACTTTGGCATGGACTGTATTTATTTTCAAAATTGCTTTTTTTGTTTTTGTTTTTCTTGGCAAGTTTTATTGTGAGTTTTCTAATTATGAAGCAAAATTTCTTTTCTCCACCATGCTTTATGTGATAGTATTTAAAATTGATGTGCATTATTATGTCAAAAACCTGATCTATTAAAGAAGTAATTGGCCTTTCTGAGCTGATTTTTCCATCTTTTGTAATTATCTTTATTAAAAAATTGTACTTGGATTGTCTTTTGTCTGTTTATTACAACATGGAGTCTTTTCTCATAAGCTAGTGACATGATCTTTTCTTTAGAAATAGAATACACTATAGGTGAACGATACTGATTACAGCTTCAAAAACATGCAACATCGTTTCTTCAGCAAAGAGTATTTTCCATATTGTTATTTCTTAGTATCATAGGAGTTGTGCCGTCTTGTCCTTTATAGGTTAACTGGTTAATATTGAAGATTGATATCTCATTATCATAATTTATCTCTGAAATTAATGATACAAGCTATGCAATTGAGATATAGGAGTTATCTTTGAGCTGAACCAAAGAGTCAAAAAATTGAAAATGGAAATTGAGTTGAAAAAAGAAATCTATAATCAGAGGAGGAAACTAGCTATACGTGACTTTTGCCATCCCTACGTATATACCAAGTAGACAAGGAGTTGTATGGTTGTATTTGATCAGAGGAACCTTTCTGTATTTATAGTAAGTCTAAAATAAAAACCTGCTGCTTGGAGAAAACCTGGTTCTTCTACTGCATTCTCATGATATTTGGGTTCCATTATTACACCCAGGTTTTCAAACCAAGGGAATAAACACTCAAAGTCATTTATCATTCAATTTATTGATTGTTTTAAGGCTTTGTGCAACTGACTGTAATGGAAATTGTATGGCTGCTCCCAGAGCTTTGCATCCTGATGGTAGAAAGAAGATAAATGGCGTGATTTCTACTACTAAGATAAGGGAAGCAATTTTTTTGAGAAACTTGCTGAAATCAGTGAACTCTCTCAGCCAAGCCCAAATTGATTATTTTGAGATTAAAAAAATGTTTCTTTAAAAGCCCCTGTGTTACAACATACTTCAGACATTTACTACAGCACCTGGGCTTTTGTAGTGAACAGCCATTTTCCCACCTGTATTTAATTGATGCTTCACTTTTGTCTTAT
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
