WERAM Information

Tag Content
WERAM ID WERAM-Bot-0111
Ensembl Protein ID ENSBTAP00000015734.4
Gene Name HDAC2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSBTAG00000011849.5 ENSBTAT00000015734.4 ENSBTAP00000015734.4
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 3.40e-157 523 10 321
Organism Bos taurus
Domain Profile
  HDAC Class-I
           class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 
                           kkv+y+yd d+g+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+aee++k+hs+eyi+fl++++p+n++e+sk++++fnvg
  ENSBTAP00000015734.4  10 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVG 98 
                           589************************************************************************************** PP
           class-1.txt  90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
                           edcPvfdglfe+cql+tG+s+++a kLn++++d+a+nwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea
  ENSBTAP00000015734.4  99 EDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187
                           ***************************************************************************************** PP
           class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
                           fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+P++dgidDesy +ifk+vi+k+ e+  P+ v l++     agD++ +f
  ENSBTAP00000015734.4 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPVITKIGEITFPTKVCLEIQPVHSAGDQFWVF 275
                           *****************.*********************************************************************** PP
           class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                              +kgha+cv++vk+fnlpll+lGGGGYt+rnvaRcwtyetav+l
  ENSBTAP00000015734.4 276 VYCVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVAL 321
                           *******************************************987 PP
Protein Sequence
(Fasta)		MAYSQGGGKK KVCYYYDGDI GNYYYGQGHP MKPHRIRMTH NLLLNYGLYR KMEIYRPHKA 60
TAEEMTKYHS DEYIKFLRSI RPDNMSEYSK QMQRFNVGED CPVFDGLFEF CQLSTGGSVA 120
GAVKLNRQQT DMAVNWAGGL HHAKKSEASG FCYVNDIVLA ILELLKYHQR VLYIDIDIHH 180
GDGVEEAFYT TDRVMTVSFH KYGEYFPGTG DLRDIGAGKG KYYAVNFPMR DGIDDESYGQ 240
IFKPVITKIG EITFPTKVCL EIQPVHSAGD QFWVFVYCVK GHAKCVEVVK TFNLPLLMLG 300
GGGYTIRNVA RCWTYETAVA LDCEIPNELP YNDYFEYFGP DFKLHISPSN MTNQNTPEYM 360
EKIKQRLFEN LRMLPHAPGV QMQAIPEDAV HEDSGDEDGE DPDKRISIRA SDKRIACDEE 420
FSDSEDEGEG GRRNVTDHKK GAKKARIEED KKETEDKKAD VKEEDKSKDN SGEKTDTKGA 480
KSEQLSNP 488
Nucleotide Sequence
(Fasta)		AGCAACAGCA GCAAGAGGAG GAGCCGGAGG CGGCGGTGGC CGGGGAGCCC ATGGCGTACA 60
GTCAAGGAGG CGGCAAGAAG AAAGTCTGCT ACTACTATGA TGGTGATATT GGAAATTATT 120
ATTACGGACA GGGTCATCCC ATGAAACCTC ATAGGATCCG CATGACCCAT AACTTGCTGC 180
TAAATTATGG CTTATATAGA AAAATGGAGA TATATAGGCC CCATAAAGCC ACTGCTGAAG 240
AAATGACAAA ATACCACAGT GATGAGTACA TCAAATTTCT ACGTTCAATA AGACCAGATA 300
ACATGTCTGA GTATAGTAAG CAGATGCAGA GATTTAATGT CGGAGAGGAC TGTCCAGTGT 360
TTGATGGACT TTTTGAATTT TGTCAGCTTT CAACTGGTGG CTCAGTTGCT GGTGCTGTGA 420
AATTAAACAG ACAACAAACT GATATGGCTG TTAACTGGGC TGGAGGATTA CATCATGCTA 480
AGAAATCAGA AGCATCAGGA TTCTGTTATG TTAATGATAT TGTGCTTGCC ATCCTTGAAT 540
TACTAAAGTA TCATCAGAGA GTCTTATATA TTGATATTGA TATCCATCAT GGTGATGGTG 600
TTGAGGAGGC TTTTTATACA ACAGATCGTG TAATGACTGT ATCATTCCAT AAGTATGGGG 660
AATACTTTCC TGGAACAGGA GACTTAAGGG ATATTGGTGC AGGAAAAGGC AAATACTATG 720
CTGTCAATTT TCCAATGAGA GATGGTATAG ATGATGAATC ATATGGCCAG ATATTTAAGC 780
CTGTAATAAC AAAAATTGGA GAGATTACTT TCCCAACAAA GGTCTGTCTA GAGATCCAAC 840
CAGTCCATTC TGCAGGAGAT CAGTTCTGGG TTTTTGTATA TTGTGTAAAA GGTCATGCTA 900
AATGTGTAGA AGTTGTAAAA ACTTTCAATT TACCATTACT GATGCTTGGG GGAGGTGGAT 960
ACACAATCCG CAACGTTGCT CGGTGTTGGA CATATGAGAC TGCAGTTGCC CTTGATTGTG 1020
AGATTCCCAA CGAATTGCCA TATAATGATT ATTTTGAGTA TTTTGGACCG GACTTCAAAC 1080
TGCATATTAG TCCTTCAAAC ATGACAAACC AGAACACTCC AGAATATATG GAAAAGATAA 1140
AACAGCGTTT ATTTGAAAAT TTACGCATGT TGCCTCATGC ACCTGGCGTC CAGATGCAAG 1200
CTATTCCAGA AGATGCAGTT CATGAAGATA GTGGAGATGA AGATGGAGAA GATCCAGACA 1260
AGAGAATTTC TATTCGAGCA TCAGACAAAC GAATAGCTTG TGATGAAGAG TTCTCAGATT 1320
CTGAGGACGA AGGAGAAGGC GGTCGTAGAA ATGTGACTGA TCATAAGAAA GGAGCAAAAA 1380
AAGCTAGAAT CGAAGAAGAC AAGAAGGAAA CGGAGGACAA AAAAGCAGAT GTTAAGGAGG 1440
AAGATAAATC CAAGGATAAT AGTGGTGAAA AAACAGATAC CAAAGGAGCC AAATCAGAAC 1500
AGCTCAGCAA TCCTTGA 1518
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 94 0.0 798
WERAM-Ova-0099 ENSOARP00000010190.1 Ovis aries 95 0.0 791
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 95 0.0 790
WERAM-Gaga-0137 ENSGALP00000024133.3 Gallus gallus 95 0.0 790
WERAM-Myl-0035 ENSMLUP00000002835.2 Myotis lucifugus 95 0.0 790
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 94 0.0 790
WERAM-Orc-0004 ENSOCUP00000000521.2 Oryctolagus cuniculus 94 0.0 789
WERAM-Hos-0228 ENSP00000430432.1 Homo sapiens 94 0.0 789
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 94 0.0 788
WERAM-Chs-0191 ENSCSAP00000011772.1 Chlorocebus sabaeus 94 0.0 788
WERAM-Ran-0006 ENSRNOP00000000742.6 Rattus norvegicus 94 0.0 788
WERAM-Sus-0028 ENSSSCP00000004781.2 Sus scrofa 95 0.0 788
WERAM-Mum-0029 ENSMUSP00000019911.7 Mus musculus 94 0.0 787
WERAM-Cap-0156 ENSCPOP00000012920.2 Cavia porcellus 94 0.0 787
WERAM-Tag-0146 ENSTGUP00000012328.1 Taeniopygia guttata 94 0.0 786
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 94 0.0 786
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 94 0.0 784
WERAM-Pat-0155 ENSPTRP00000049696.3 Pan troglodytes 94 0.0 784
WERAM-Poa-0153 ENSPPYP00000018964.2 Pongo abelii 94 0.0 783
WERAM-Nol-0145 ENSNLEP00000015855.1 Nomascus leucogenys 94 0.0 783
WERAM-Aim-0151 ENSAMEP00000013919.1 Ailuropoda melanoleuca 94 0.0 783
WERAM-Dan-0143 ENSDNOP00000031144.1 Dasypus novemcinctus 94 0.0 783
WERAM-Gog-0059 ENSGGOP00000005320.2 Gorilla gorilla 94 0.0 782
WERAM-Anc-0129 ENSACAP00000012046.2 Anolis carolinensis 93 0.0 782
WERAM-Loa-0063 ENSLAFP00000004670.4 Loxodonta africana 94 0.0 779
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 94 0.0 771
WERAM-Caf-0048 ENSCAFP00000006011.3 Canis familiaris 94 0.0 770
WERAM-Anp-0059 ENSAPLP00000006605.1 Anas platyrhynchos 94 0.0 770
WERAM-Meg-0131 ENSMGAP00000014157.2 Meleagris gallopavo 94 0.0 769
WERAM-Xet-0050 ENSXETP00000015978.3 Xenopus tropicalis 92 0.0 768
WERAM-Eqc-0098 ENSECAP00000011591.1 Equus caballus 94 0.0 766
WERAM-Fec-0156 ENSFCAP00000015379.2 Felis catus 91 0.0 766
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 94 0.0 765
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 94 0.0 765
WERAM-Pes-0022 ENSPSIP00000004737.1 Pelodiscus sinensis 93 0.0 759
WERAM-Mup-0118 ENSMPUP00000010193.1 Mustela putorius furo 94 0.0 757
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 92 0.0 753
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 94 0.0 733
WERAM-Dio-0132 ENSDORP00000012520.1 Dipodomys ordii 89 0.0 715
WERAM-Orn-0136 ENSONIP00000014285.1 Oreochromis niloticus 84 0.0 712
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 82 0.0 711
WERAM-Mam-0073 ENSMMUP00000011716.2 Macaca mulatta 88 0.0 711
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 86 0.0 710
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 86 0.0 709
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 85 0.0 708
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 87 0.0 708
WERAM-Xim-0061 ENSXMAP00000005239.1 Xiphophorus maculatus 83 0.0 707
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 81 0.0 700
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 83 0.0 698
WERAM-Leo-0176 ENSLOCP00000020984.1 Lepisosteus oculatus 84 0.0 697
WERAM-Ten-0060 ENSTNIP00000007837.1 Tetraodon nigroviridis 82 0.0 693
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 85 0.0 690
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 85 0.0 686
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 87 0.0 683
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 85 0.0 682
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 84 0.0 660
WERAM-Tub-0118 ENSTBEP00000013142.1 Tupaia belangeri 82 0.0 655
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 77 0.0 653
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 79 0.0 635
WERAM-Soa-0003 ENSSARP00000000316.1 Sorex araneus 79 1e-171 600
WERAM-Pem-0096 ENSPMAP00000010023.1 Petromyzon marinus 76 5e-165 578
WERAM-Mim-0092 ENSMICP00000008598.1 Microcebus murinus 77 6e-164 574
WERAM-Chh-0102 ENSCHOP00000011659.1 Choloepus hoffmanni 75 4e-163 572
WERAM-Mae-0030 ENSMEUP00000002192.1 Macropus eugenii 73 5e-161 565
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 66 1e-150 530
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 64 2e-149 526
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 64 1e-147 520
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 64 1e-147 520
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 64 2e-147 520
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 63 2e-147 520
WERAM-Coi-0024 EAS33504 Coccidioides immitis 64 2e-147 519
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 64 1e-144 510
WERAM-Ved-0020 EGY15146 Verticillium dahliae 63 3e-144 509
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 63 4e-144 508
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 62 8e-144 508
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 63 1e-143 507
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 63 2e-143 506
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 63 2e-143 506
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 63 2e-143 506
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 63 2e-143 506
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 62 6e-143 504
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 63 7e-143 504
WERAM-Trv-0003 EHK19072 Trichoderma virens 63 1e-142 503
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 63 2e-142 503
WERAM-Caa-0018 KGT69072 Candida albicans 61 2e-142 503
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 62 6e-142 501
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 62 7e-142 501
WERAM-Thc-0029 EOY20838 Theobroma cacao 62 8e-142 501
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 63 1e-141 500
WERAM-Prp-0060 EMJ10303 Prunus persica 62 1e-141 500
WERAM-Kop-0004 CAY67954 Komagataella pastoris 62 2e-141 499
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 62 3e-141 499
WERAM-Trr-0017 EGR48353 Trichoderma reesei 63 3e-141 499
WERAM-Amt-0072 ERN20455 Amborella trichopoda 62 7e-141 498
WERAM-Cag-0003 CAG57932 Candida glabrata 62 1e-140 497
WERAM-Asg-0034 AAS54885 Ashbya gossypii 61 2e-140 496
WERAM-Pot-0149 POPTR_0015s09400.1 Populus trichocarpa 62 3e-140 495
WERAM-Brr-0180 Bra035858.1-P Brassica rapa 62 3e-140 495
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 62 6e-140 494
WERAM-Sol-0082 Solyc06g071680.2.1 Solanum lycopersicum 61 6e-140 494
WERAM-Bro-0169 Bo9g017510.1 Brassica oleracea 62 9e-140 494
WERAM-Met-0068 AES71453 Medicago truncatula 60 1e-139 493
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 62 1e-139 493
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 62 2e-139 493
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 63 2e-138 489
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 63 2e-138 489
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 63 3e-138 489
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 63 3e-138 489
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 63 3e-138 489
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 63 3e-138 489
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 61 4e-138 488
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 63 4e-138 488
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 58 7e-138 488
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 61 2e-137 486
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 63 2e-137 486
WERAM-Sei-0026 Si006243m Setaria italica 63 3e-137 485
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 63 5e-137 485
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 63 8e-137 484
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 63 8e-137 484
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 59 1e-136 484
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 63 1e-136 483
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 62 2e-136 483
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 62 3e-136 483
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 62 3e-136 482
WERAM-Pytr-0033 EDU43668 Pyrenophora triticirepentis 61 1e-135 481
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 59 1e-135 480
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 62 1e-135 480
WERAM-Miv-0036 MVLG_05319T0 Microbotryum violaceum 60 1e-135 480
WERAM-Lab-0002 EDR16061 Laccaria bicolor 61 3e-135 479
WERAM-Aet-0051 EMT16627 Aegilops tauschii 62 4e-135 479
WERAM-Usm-0008 UM01352P0 Ustilago maydis 59 5e-135 478
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 60 2e-134 476
WERAM-Crn-0023 AAW44291 Cryptococcus neoformans 61 3e-134 476
WERAM-Pug-0005 EFP76878 Puccinia graminis 60 3e-134 476
WERAM-Nec-0007 EFNCRP00000000997 Neurospora crassa 60 3e-134 476
Created Date 25-Jun-2016