WERAM Information


Tag Content
WERAM ID WERAM-Loa-0063
Ensembl Protein ID ENSLAFP00000004670.4
Gene Name HDAC2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLAFG00000005566.4 ENSLAFT00000005566.4 ENSLAFP00000004670.4
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.20e-172 574 10 320
Organism Loxodonta africana
Domain Profile
  HDAC Class-I

           class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 
kkv+y+yd d+g+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+aee++k+hs+eyi+fl++++p+n++e+sk++++fnvg
ENSLAFP00000004670.4 10 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVG 98
589************************************************************************************** PP
class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
edcPvfdglfe+cql+tG+s+++a kLn++++d+a+nwaGGlhhakkseasGfcyvnDivl ilellk+h+rvlyidid+hhGDgveea
ENSLAFP00000004670.4 99 EDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVL-ILELLKYHQRVLYIDIDIHHGDGVEEA 186
***********************************************************98.9************************** PP
class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+P++dgidDesy +ifk++iskv+e+++P+avvlqcGaDsl+gDrlg+f
ENSLAFP00000004670.4 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCF 274
*****************.*********************************************************************** PP
class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
nl++kgha+cv++vk+fnlpll+lGGGGYt+rnvaRcwtyetav+l
ENSLAFP00000004670.4 275 NLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVAL 320
*******************************************987 PP

Protein Sequence
(Fasta)
MAYSQGGGKK KVCYYYDGDI GNYYYGQGHP MKPHRIRMTH NLLLNYGLYR KMEIYRPHKA 60
TAEEMTKYHS DEYIKFLRSI RPDNMSEYSK QMQRFNVGED CPVFDGLFEF CQLSTGGSVA 120
GAVKLNRQQT DMAVNWAGGL HHAKKSEASG FCYVNDIVLI LELLKYHQRV LYIDIDIHHG 180
DGVEEAFYTT DRVMTVSFHK YGEYFPGTGD LRDIGAGKGK YYAVNFPMRD GIDDESYGQI 240
FKPIISKVME MYQPSAVVLQ CGADSLSGDR LGCFNLTVKG HAKCVEVVKT FNLPLLMLGG 300
GGYTIRNVAR CWTYETAVAL DCEIPNELPY NDYFEYFGPD FKLHISPSNM TNQNTPEYME 360
KIKQRLFENL RMLPHAPGVQ MQAIPEDAVH EDSGDEDGED PDKRISIRAS DKRIACDEEF 420
SDSEDEGEGG RRNVADHKKG AKKARLEEDK KETEDKKADV KEEDKSKDSS GEKTDSKGTK 480
SEQLSNP 487
Nucleotide Sequence
(Fasta)
ATGGCGTACA GTCAGGGAGG CGGCAAAAAG AAAGTCTGCT ACTACTACGA TGGTGATATT 60
GGAAATTACT ATTATGGACA GGGCCATCCT ATGAAACCTC ACAGAATCCG CATGACCCAT 120
AACTTGCTCC TAAATTATGG CTTATATAGA AAAATGGAAA TATATAGACC CCATAAAGCA 180
ACTGCTGAAG AAATGACAAA ATACCACAGT GATGAGTACA TCAAATTTCT GCGTTCAATA 240
AGACCAGATA ACATGTCTGA GTATAGTAAA CAGATGCAGA GATTTAATGT TGGAGAAGAT 300
TGCCCAGTGT TTGATGGACT CTTTGAGTTT TGTCAGCTCT CAACTGGTGG CTCAGTTGCT 360
GGGGCTGTGA AGTTAAACCG ACAACAAACT GATATGGCTG TTAACTGGGC TGGAGGATTA 420
CATCATGCTA AGAAATCAGA AGCGTCAGGA TTCTGTTATG TTAATGATAT TGTGCTTATC 480
CTTGAATTGC TAAAGTATCA TCAGAGAGTC TTATATATTG ATATTGATAT CCATCACGGT 540
GATGGTGTTG AAGAAGCTTT TTATACAACA GATCGTGTAA TGACTGTATC ATTCCATAAA 600
TACGGGGAAT ACTTTCCTGG CACTGGAGAT TTGAGGGATA TTGGTGCAGG AAAAGGCAAA 660
TACTATGCTG TTAATTTTCC AATGAGAGAT GGTATAGATG ATGAGTCATA CGGGCAGATA 720
TTTAAGCCAA TTATCTCAAA AGTGATGGAG ATGTATCAAC CTAGTGCTGT GGTATTACAG 780
TGTGGTGCAG ACTCATTATC TGGTGATAGA CTTGGCTGCT TCAATCTAAC AGTCAAAGGT 840
CATGCTAAGT GTGTAGAAGT TGTAAAAACT TTCAACTTAC CATTGCTGAT GCTTGGGGGA 900
GGCGGATACA CAATCCGTAA CGTTGCTCGA TGTTGGACGT ATGAGACTGC GGTTGCCCTT 960
GATTGTGAGA TTCCTAATGA GTTGCCATAT AATGATTACT TTGAGTATTT TGGACCAGAC 1020
TTCAAACTGC ATATTAGTCC ATCAAACATG ACAAACCAGA ACACTCCAGA ATATATGGAA 1080
AAAATAAAAC AGCGTTTATT TGAAAATTTA CGCATGTTAC CTCATGCACC GGGTGTCCAA 1140
ATGCAAGCTA TTCCGGAAGA TGCTGTTCAT GAAGATAGTG GAGACGAAGA TGGAGAAGAT 1200
CCAGACAAGA GAATTTCTAT TCGAGCATCA GATAAGCGGA TAGCCTGTGA TGAAGAATTC 1260
TCAGATTCTG AGGATGAAGG AGAAGGAGGT CGTAGAAATG TGGCTGATCA TAAGAAAGGA 1320
GCAAAGAAAG CTAGACTTGA AGAAGACAAG AAGGAGACAG AGGACAAAAA AGCAGATGTT 1380
AAAGAAGAAG ATAAATCCAA GGACAGTAGC GGTGAAAAAA CAGATTCCAA AGGAACCAAA 1440
TCGGAACAGC TCAGCAACCC TTGA 1465
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 98 0.0 826
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 99 0.0 821
WERAM-Chs-0191 ENSCSAP00000011772.1 Chlorocebus sabaeus 99 0.0 821
WERAM-Hos-0228 ENSP00000430432.1 Homo sapiens 99 0.0 820
WERAM-Anc-0129 ENSACAP00000012046.2 Anolis carolinensis 99 0.0 820
WERAM-Myl-0035 ENSMLUP00000002835.2 Myotis lucifugus 99 0.0 819
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 99 0.0 819
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 99 0.0 818
WERAM-Tag-0146 ENSTGUP00000012328.1 Taeniopygia guttata 99 0.0 818
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 99 0.0 818
WERAM-Gaga-0137 ENSGALP00000024133.3 Gallus gallus 99 0.0 818
WERAM-Orc-0004 ENSOCUP00000000521.2 Oryctolagus cuniculus 99 0.0 818
WERAM-Mum-0029 ENSMUSP00000019911.7 Mus musculus 99 0.0 817
WERAM-Ova-0099 ENSOARP00000010190.1 Ovis aries 99 0.0 817
WERAM-Sus-0028 ENSSSCP00000004781.2 Sus scrofa 99 0.0 816
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 98 0.0 815
WERAM-Poa-0153 ENSPPYP00000018964.2 Pongo abelii 99 0.0 815
WERAM-Ran-0006 ENSRNOP00000000742.6 Rattus norvegicus 98 0.0 815
WERAM-Pat-0155 ENSPTRP00000049696.3 Pan troglodytes 99 0.0 815
WERAM-Nol-0145 ENSNLEP00000015855.1 Nomascus leucogenys 99 0.0 815
WERAM-Cap-0156 ENSCPOP00000012920.2 Cavia porcellus 99 0.0 815
WERAM-Gog-0059 ENSGGOP00000005320.2 Gorilla gorilla 99 0.0 814
WERAM-Aim-0151 ENSAMEP00000013919.1 Ailuropoda melanoleuca 99 0.0 813
WERAM-Dan-0143 ENSDNOP00000031144.1 Dasypus novemcinctus 99 0.0 811
WERAM-Mup-0118 ENSMPUP00000010193.1 Mustela putorius furo 100 0.0 806
WERAM-Xet-0050 ENSXETP00000015978.3 Xenopus tropicalis 97 0.0 805
WERAM-Caf-0048 ENSCAFP00000006011.3 Canis familiaris 99 0.0 801
WERAM-Meg-0131 ENSMGAP00000014157.2 Meleagris gallopavo 99 0.0 800
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 99 0.0 800
WERAM-Anp-0059 ENSAPLP00000006605.1 Anas platyrhynchos 99 0.0 799
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 99 0.0 797
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 98 0.0 797
WERAM-Fec-0156 ENSFCAP00000015379.2 Felis catus 96 0.0 796
WERAM-Eqc-0098 ENSECAP00000011591.1 Equus caballus 98 0.0 795
WERAM-Pes-0022 ENSPSIP00000004737.1 Pelodiscus sinensis 98 0.0 793
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 100 0.0 783
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 97 0.0 780
WERAM-Bot-0111 ENSBTAP00000015734.4 Bos taurus 94 0.0 759
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 90 0.0 754
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 91 0.0 754
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 90 0.0 753
WERAM-Orn-0136 ENSONIP00000014285.1 Oreochromis niloticus 91 0.0 753
WERAM-Xim-0061 ENSXMAP00000005239.1 Xiphophorus maculatus 91 0.0 752
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 92 0.0 752
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 91 0.0 751
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 90 0.0 747
WERAM-Leo-0176 ENSLOCP00000020984.1 Lepisosteus oculatus 91 0.0 746
WERAM-Dio-0132 ENSDORP00000012520.1 Dipodomys ordii 93 0.0 746
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 91 0.0 743
WERAM-Mam-0073 ENSMMUP00000011716.2 Macaca mulatta 93 0.0 741
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 91 0.0 736
WERAM-Ten-0060 ENSTNIP00000007837.1 Tetraodon nigroviridis 90 0.0 733
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 90 0.0 733
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 91 0.0 732
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 89 0.0 719
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 82 0.0 700
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 88 0.0 698
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 84 0.0 681
WERAM-Tub-0118 ENSTBEP00000013142.1 Tupaia belangeri 81 1e-180 629
WERAM-Soa-0003 ENSSARP00000000316.1 Sorex araneus 84 5e-180 628
WERAM-Pem-0096 ENSPMAP00000010023.1 Petromyzon marinus 80 1e-178 623
WERAM-Mim-0092 ENSMICP00000008598.1 Microcebus murinus 81 2e-175 612
WERAM-Mae-0030 ENSMEUP00000002192.1 Macropus eugenii 78 3e-174 608
WERAM-Chh-0102 ENSCHOP00000011659.1 Choloepus hoffmanni 79 4e-172 602
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 69 1e-162 570
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 70 5e-162 568
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 69 4e-161 565
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 69 1e-160 563
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 68 1e-160 563
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 68 1e-160 563
WERAM-Coi-0024 EAS33504 Coccidioides immitis 69 2e-160 562
WERAM-Ved-0020 EGY15146 Verticillium dahliae 68 7e-158 554
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 68 1e-157 553
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 69 3e-157 552
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 67 9e-157 550
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 69 1e-156 550
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 68 3e-156 548
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 68 6e-156 548
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 67 6e-156 548
WERAM-Prp-0060 EMJ10303 Prunus persica 68 7e-156 547
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 67 9e-156 547
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 67 2e-155 546
WERAM-Caa-0018 KGT69072 Candida albicans 66 2e-155 546
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 68 3e-155 545
WERAM-Thc-0029 EOY20838 Theobroma cacao 68 3e-155 545
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 67 4e-155 545
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 68 5e-155 545
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 67 8e-155 544
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 68 9e-155 544
WERAM-Kop-0004 CAY67954 Komagataella pastoris 67 1e-154 543
WERAM-Trv-0003 EHK19072 Trichoderma virens 68 3e-154 542
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 67 3e-154 542
WERAM-Amt-0072 ERN20455 Amborella trichopoda 67 5e-154 541
WERAM-Cag-0003 CAG57932 Candida glabrata 67 1e-153 540
WERAM-Pot-0149 POPTR_0015s09400.1 Populus trichocarpa 68 2e-153 540
WERAM-Brr-0180 Bra035858.1-P Brassica rapa 68 2e-153 540
WERAM-Asg-0034 AAS54885 Ashbya gossypii 66 2e-153 539
WERAM-Met-0068 AES71453 Medicago truncatula 65 5e-153 538
WERAM-Bro-0169 Bo9g017510.1 Brassica oleracea 68 5e-153 538
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 68 7e-153 537
WERAM-Trr-0017 EGR48353 Trichoderma reesei 67 8e-153 537
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 68 1e-152 537
WERAM-Sol-0082 Solyc06g071680.2.1 Solanum lycopersicum 66 1e-152 536
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 67 4e-152 535
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 65 4e-151 531
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 66 9e-151 530
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 68 1e-150 530
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 68 1e-150 530
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 68 1e-150 530
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 62 1e-150 530
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 68 2e-150 529
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 67 2e-150 529
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 68 3e-150 529
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 68 3e-150 529
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 67 1e-149 527
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 68 2e-149 526
WERAM-Sei-0026 Si006243m Setaria italica 67 4e-149 525
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 68 6e-149 524
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 67 7e-149 524
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 68 8e-149 524
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 67 9e-149 524
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 67 2e-148 523
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 66 2e-148 523
WERAM-Pytr-0033 EDU43668 Pyrenophora triticirepentis 66 3e-148 522
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 62 4e-148 522
WERAM-Aet-0051 EMT16627 Aegilops tauschii 67 7e-148 521
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 63 1e-147 520
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 67 1e-147 520
WERAM-Lab-0002 EDR16061 Laccaria bicolor 63 3e-147 519
WERAM-Nec-0007 EFNCRP00000000997 Neurospora crassa 65 6e-147 518
WERAM-Usm-0008 UM01352P0 Ustilago maydis 63 8e-147 517
WERAM-Crn-0023 AAW44291 Cryptococcus neoformans 65 4e-146 515
Created Date 25-Jun-2016