WERAM Information

Tag Content
WERAM ID WERAM-Viv-0012
Ensembl Protein ID VIT_03s0038g04240.t01
Gene Name VIT_03s0038g04240
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_03s0038g04240 VIT_03s0038g04240.t01 VIT_03s0038g04240.t01
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 5.00e-165 549.2 17 328
Organism Vitis vinifera
Domain Profile
  HDAC Class-I
            class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnv 88 
                            +kv+y+yd++vg+y+ygq+hpmkp+r+++th L+ +ygl ++++++kp  a+ ++l++fh+++y++fl+ ++pe++++  ++lk+fnv
  VIT_03s0038g04240.t01  17 RKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRFHADDYVSFLRGITPETQQDQLRQLKRFNV 104
                            589************************************************************************************* PP
            class-1.txt  89 gedcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgve 176
                            gedcPvfdgl+++cq+++G+s+ +a kLn++ +dia+nwaGGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgve
  VIT_03s0038g04240.t01 105 GEDCPVFDGLYSFCQTYAGGSVGGAVKLNHGLCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVE 192
                            **************************************************************************************** PP
            class-1.txt 177 eafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrl 264
                            eafyttdrvmtvsfhk+g+ +fPgtGd++d+g +kgkyy++nvPl+dgidDesy+ +fk++i kv+e+f+P avvlqcGaDsl+gDrl
  VIT_03s0038g04240.t01 193 EAFYTTDRVMTVSFHKFGD-YFPGTGDIRDIGFGKGKYYSLNVPLDDGIDDESYHFLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRL 279
                            *******************.******************************************************************** PP
            class-1.txt 265 gefnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                            g+fnlsikghaecv++++sfn+pll+lGGGGYt+rnvaRcw+yet+v+l
  VIT_03s0038g04240.t01 280 GCFNLSIKGHAECVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVAL 328
                            **********************************************986 PP
Protein Sequence
(Fasta)		MDTGGNSLPS GADGVKRKVS YFYDPEVGNY YYGQGHPMKP HRIRMTHALL AHYGLLQHMQ 60
VLKPFPARDR DLCRFHADDY VSFLRGITPE TQQDQLRQLK RFNVGEDCPV FDGLYSFCQT 120
YAGGSVGGAV KLNHGLCDIA VNWAGGLHHA KKCEASGFCY VNDIVLAILE LLKQHERVLY 180
VDIDIHHGDG VEEAFYTTDR VMTVSFHKFG DYFPGTGDIR DIGFGKGKYY SLNVPLDDGI 240
DDESYHFLFK PIIGKVMEVF RPGAVVLQCG ADSLSGDRLG CFNLSIKGHA ECVRYMRSFN 300
VPLLLLGGGG YTIRNVARCW CYETGVALGI EVDDKMPQHE YYEYFGPDYT LHVAPSNMEN 360
KNSHQILDEI RAKLLDNLSK LRHAPSVQFQ ERPPDTELPE ADEDHDDGDE RWDPESDMEV 420
DEEHKPLPSR VKREIVEPEA KDSDDKKGVA EHSRGFDTAA EETACSKASD VCPMPIDEPN 480
VKVEQENLNK PFDQPVQMYP KP 502
Nucleotide Sequence
(Fasta)		TTATTGGCTA ATGGATACCG GTGGCAATTC TCTTCCATCT GGAGCTGATG GGGTGAAGAG 60
AAAAGTGTCA TATTTCTATG ATCCAGAGGT CGGAAATTAC TACTATGGGC AGGGTCACCC 120
TATGAAGCCA CATAGGATTA GAATGACACA TGCTCTCCTA GCCCACTATG GATTGCTTCA 180
ACATATGCAG GTTCTGAAGC CGTTTCCTGC CAGAGATAGG GATCTTTGCC GGTTTCATGC 240
AGATGATTAC GTATCTTTTC TAAGGGGTAT CACCCCTGAA ACGCAGCAGG ATCAGCTGAG 300
GCAACTAAAG CGTTTTAATG TAGGTGAAGA TTGCCCCGTA TTTGATGGTC TCTACTCTTT 360
CTGTCAAACT TATGCTGGTG GGTCAGTTGG TGGTGCGGTT AAGCTAAATC ATGGTCTCTG 420
TGATATTGCT GTTAACTGGG CTGGTGGACT GCACCATGCT AAGAAGTGTG AGGCTTCTGG 480
ATTTTGTTAC GTGAATGATA TTGTCCTGGC AATCTTGGAG CTTCTTAAAC AACATGAGCG 540
TGTTTTGTAC GTGGATATCG ATATCCATCA TGGAGATGGT GTGGAGGAGG CTTTCTACAC 600
AACTGACAGG GTGATGACTG TTTCATTTCA TAAATTTGGT GATTATTTTC CTGGTACAGG 660
GGATATTCGT GATATTGGAT TTGGGAAAGG AAAATATTAC TCCCTTAACG TTCCATTAGA 720
TGATGGGATT GACGACGAGA GCTACCATTT CTTGTTCAAA CCAATAATTG GGAAAGTGAT 780
GGAGGTTTTT AGGCCTGGTG CTGTGGTTCT TCAGTGTGGT GCTGACTCCT TATCTGGGGA 840
CAGGTTAGGA TGCTTCAATC TTTCAATCAA AGGCCATGCA GAGTGCGTTC GGTATATGAG 900
ATCATTCAAT GTGCCACTAT TGCTGCTGGG TGGTGGTGGT TATACCATCA GAAATGTTGC 960
TCGTTGCTGG TGCTATGAGA CGGGTGTTGC CCTTGGGATT GAAGTTGATG ACAAGATGCC 1020
ACAACATGAG TACTATGAGT ACTTTGGTCC AGACTATACT CTTCATGTTG CCCCTAGTAA 1080
CATGGAAAAT AAAAATTCAC ACCAAATACT GGATGAAATA AGGGCTAAGC TTCTTGATAA 1140
TCTGTCAAAA CTTCGACATG CACCCAGCGT CCAGTTTCAA GAGAGACCCC CAGATACCGA 1200
GCTCCCAGAG GCAGATGAAG ACCACGATGA TGGAGATGAG AGATGGGATC CAGAGTCCGA 1260
CATGGAAGTT GATGAAGAGC ATAAGCCTCT ACCAAGCAGA GTAAAGAGAG AAATTGTGGA 1320
ACCTGAGGCT AAAGATTCGG ACGACAAGAA AGGAGTTGCA GAGCACTCTA GAGGCTTTGA 1380
TACAGCTGCA GAGGAGACTG CTTGCTCAAA GGCTTCAGAT GTGTGTCCTA TGCCAATAGA 1440
TGAACCAAAT GTGAAAGTTG AACAAGAGAA CTTGAACAAG CCATTTGATC AGCCTGTCCA 1500
GATGTACCCA AAGCCATGAA CAACTCTACT GCATGAATGG AAAGTGTATG TTATTAACTT 1560
TTTTTAATTG TAAAATTTAT CCACTTCATT AACCTCACTC CAGACATTTG TATGGATGAA 1620
GTAGAAACCC AAAAATTTGG TGTCTTAAAG TGCTGTGCAG AGTTGAAATT ATGTATTTAT 1680
TGGGACCTAG AACAGTTGAA AATTACTAGA GAATGGGTCA TTCATATAGT TCAATGGAGC 1740
TTTTGGCTTC AACTGGGCTC ATTCCCAACG CCCAATAGAT GTTGATTACT TGATATTGTA 1800
AAACAACTTC ATTTCA 1817
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0026 EOX98961 Theobroma cacao 90 0.0 891
WERAM-Pot-0051 POPTR_0004s21950.1 Populus trichocarpa 87 0.0 867
WERAM-Prp-0056 EMJ02177 Prunus persica 88 0.0 841
WERAM-Glm-0156 GLYMA13G06010.3 Glycine max 87 0.0 829
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 84 0.0 825
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 84 0.0 821
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 85 0.0 820
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 84 0.0 816
WERAM-Met-0084 KEH36404 Medicago truncatula 85 0.0 815
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 83 0.0 813
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 77 0.0 809
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 78 0.0 778
WERAM-Amt-0016 ERM94967 Amborella trichopoda 79 0.0 775
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 79 0.0 775
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 79 0.0 774
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 79 0.0 772
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 79 0.0 770
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 78 0.0 768
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 77 0.0 767
WERAM-Sei-0026 Si006243m Setaria italica 78 0.0 765
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 78 0.0 765
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 84 0.0 755
WERAM-Aet-0051 EMT16627 Aegilops tauschii 78 0.0 748
WERAM-Zem-0099 GRMZM2G172883_P01 Zea mays 78 0.0 748
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 84 0.0 744
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 85 0.0 738
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 84 0.0 736
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 77 0.0 733
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 78 0.0 708
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 84 0.0 700
WERAM-Hov-0099 MLOC_71091.1 Hordeum vulgare 89 0.0 686
WERAM-Mua-0048 GSMUA_Achr2P19590_001 Musa acuminata 69 0.0 667
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 71 1e-172 603
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 69 4e-168 588
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 69 4e-168 588
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 68 5e-168 588
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 68 8e-168 587
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 68 1e-167 587
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 68 1e-167 586
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 68 2e-167 586
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 68 2e-167 586
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 68 2e-167 586
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 68 2e-167 586
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 68 3e-167 585
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 68 3e-167 585
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 68 3e-167 585
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 68 4e-167 585
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 68 4e-167 585
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 68 4e-167 585
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 68 4e-167 585
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 68 4e-167 585
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 68 3e-166 582
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 68 8e-166 580
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 67 1e-165 580
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 68 2e-165 579
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 68 3e-164 575
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 68 1e-163 573
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 68 2e-163 572
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 68 8e-163 571
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 67 1e-162 570
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 68 1e-162 570
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 68 1e-162 570
WERAM-Orn-0136 ENSONIP00000014285.1 Oreochromis niloticus 68 2e-162 570
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 69 2e-162 570
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 67 3e-162 569
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 62 3e-162 568
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 69 8e-162 567
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 65 1e-161 567
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 69 2e-161 566
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 69 2e-161 566
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 58 2e-161 566
WERAM-Tru-0006 TRIUR3_03674-P1 Triticum urartu 70 3e-161 565
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 68 4e-161 565
WERAM-Xim-0061 ENSXMAP00000005239.1 Xiphophorus maculatus 68 4e-161 565
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 68 5e-161 565
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 68 1e-160 563
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 68 1e-160 563
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 68 3e-160 562
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 67 6e-160 561
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 59 5e-159 558
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 59 7e-159 557
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 59 7e-159 557
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 59 7e-159 557
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 59 8e-159 557
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 62 4e-155 545
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 59 7e-155 544
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 68 8e-155 544
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 59 9e-155 544
WERAM-Coi-0024 EAS33504 Coccidioides immitis 62 2e-153 540
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 62 3e-153 539
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 62 8e-153 537
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 62 8e-153 537
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 62 1e-152 537
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 59 2e-152 536
WERAM-Cym-0014 CMJ129CT Cyanidioschyzon merolae 65 3e-152 535
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 63 6e-152 535
WERAM-Trv-0003 EHK19072 Trichoderma virens 63 8e-152 534
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 60 3e-151 532
WERAM-Cag-0003 CAG57932 Candida glabrata 61 4e-151 531
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 61 6e-151 531
WERAM-Ved-0020 EGY15146 Verticillium dahliae 59 6e-151 531
WERAM-Caa-0018 KGT69072 Candida albicans 51 7e-151 531
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 65 2e-150 530
WERAM-Asg-0034 AAS54885 Ashbya gossypii 61 3e-150 528
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 61 4e-150 528
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 61 5e-150 528
WERAM-Trr-0017 EGR48353 Trichoderma reesei 55 5e-150 528
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 61 3e-149 526
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 61 4e-149 525
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 62 1e-148 524
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 61 2e-148 523
Created Date 25-Jun-2016