WERAM Information

Tag Content
WERAM ID WERAM-Pot-0051
Ensembl Protein ID POPTR_0004s21950.1
Gene Name POPTR_0004s21950g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0004s21950 POPTR_0004s21950.1 POPTR_0004s21950.1
POPTR_0004s21950 POPTR_0004s21950.2 POPTR_0004s21950.2
POPTR_0004s21950 POPTR_0004s21950.3 POPTR_0004s21950.3
POPTR_0004s21950 POPTR_0004s21950.4 POPTR_0004s21950.4
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.20e-164 548.6 18 329
Organism Populus trichocarpa
Domain Profile
  HDAC Class-I
         class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvged 91 
                         +kv+y+yd++vg+y+ygq+hpmkp+r+++th L+ +ygl ++++++kp  a+ ++l++fh+++y++fl++++pe++++  ++lk+fnvged
  POPTR_0004s21950.1  18 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGED 108
                         589**************************************************************************************** PP
         class-1.txt  92 cPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafytt 182
                         cPvfdgl+++cq+++G+s+ +a kLn++ +dia+nwaGGlhhakk+easGfcyvnDivlailellk h+rvly+did+hhGDgveeafytt
  POPTR_0004s21950.1 109 CPVFDGLYSFCQTYAGGSVGGAVKLNHNLCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLYVDIDIHHGDGVEEAFYTT 199
                         ******************************************************************************************* PP
         class-1.txt 183 drvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikg 273
                         drvmtvsfhk+g+ +fPgtGd++d+g  kgkyy++nvPl+dgidDesy+ +fk++i kv+e+f+P av+lqcGaDsl+gDrlg+fnlsikg
  POPTR_0004s21950.1 200 DRVMTVSFHKFGD-YFPGTGDVRDIGYSKGKYYSLNVPLDDGIDDESYHFLFKPLIGKVMEVFKPGAVILQCGADSLSGDRLGCFNLSIKG 289
                         *************.***************************************************************************** PP
         class-1.txt 274 haecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                         haecvkf++sfn+pll+lGGGGYt+rnvaRcw+yet+v+l
  POPTR_0004s21950.1 290 HAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVAL 329
                         *************************************986 PP
Protein Sequence
(Fasta)		MDTGGNSLSS AAPDGVKRKV CYFYDPEVGN YYYGQGHPMK PHRIRMTHAL LAHYGLLQHM 60
QVLKPFPARD RDLCRFHADD YVSFLRSITP ETQQDQLRQL KRFNVGEDCP VFDGLYSFCQ 120
TYAGGSVGGA VKLNHNLCDI AVNWAGGLHH AKKCEASGFC YVNDIVLAIL ELLKVHERVL 180
YVDIDIHHGD GVEEAFYTTD RVMTVSFHKF GDYFPGTGDV RDIGYSKGKY YSLNVPLDDG 240
IDDESYHFLF KPLIGKVMEV FKPGAVILQC GADSLSGDRL GCFNLSIKGH AECVKFMRSF 300
NVPLLLLGGG GYTIRNVARC WCYETGVALG IEVDDKMPQH EYYEYFGPDY TLHVAPSNME 360
NKNSHQVLEE IRCKLLDNLS KLQHAPSVQF QERVPDTELP EAEEEQNEAD ERWDPDSDMD 420
VDEERKPLPG RVKREIVEAE PKESEGQKGS SGHARGFDTT IAENASGKAL DAGPKQIDEA 480
GVRVEQENVN KASSDQMFSK S 501
Nucleotide Sequence
(Fasta)		ATGAAGTGGT CAGGCCCATT TATGCCCGGT GAAGCGGTGA AGCCGTCATG CCCGTCTCGC 60
CACAGCCGTC CTCGATTCCA AACTAGTCTT CAAGAAAGCA GTGCAGTGCA GTGTCACATT 120
AAGTATATTT TATTTCTTCT TCTTCTTCAT CATCATTAGT TCTTCGGTTT TGTTTGTTGA 180
TTAATCTCTG CGACTGCTCA TTTACTGCAA GTAGAGAGAT CCGTGTATCC ATAATAATTA 240
ATAACTAACA ATGGACACTG GTGGCAACTC TCTCTCGTCC GCTGCTCCTG ACGGGGTTAA 300
GAGAAAGGTT TGCTATTTCT ACGATCCAGA AGTCGGCAAT TACTATTATG GCCAAGGTCA 360
CCCCATGAAG CCCCACCGCA TTCGAATGAC CCATGCTCTG CTTGCCCACT ATGGTTTGCT 420
TCAGCACATG CAGGTCCTCA AGCCCTTTCC TGCTCGCGAC CGGGATCTTT GCCGCTTCCA 480
TGCCGATGAT TATGTCTCTT TCCTCCGCAG CATTACCCCT GAGACCCAGC AGGACCAGCT 540
CAGGCAGCTC AAGCGCTTTA ATGTCGGTGA AGATTGCCCT GTTTTTGATG GCCTCTACTC 600
CTTCTGCCAG ACTTATGCTG GTGGATCTGT TGGTGGTGCC GTCAAGTTAA ATCACAACCT 660
CTGTGACATT GCTGTCAATT GGGCTGGTGG CCTCCATCAT GCTAAGAAGT GTGAGGCTTC 720
TGGTTTTTGT TATGTCAATG ACATCGTGCT TGCAATCCTG GAGCTTCTTA AAGTGCATGA 780
GCGTGTTCTG TATGTGGATA TCGACATTCA TCACGGTGAC GGTGTGGAGG AAGCATTTTA 840
CACCACTGAT AGAGTCATGA CTGTTTCATT CCATAAATTT GGAGATTATT TTCCCGGCAC 900
TGGGGATGTA CGTGATATTG GATATTCAAA AGGAAAATAC TACTCTCTTA ATGTTCCGTT 960
GGATGATGGG ATTGATGATG AGAGCTATCA TTTCTTGTTT AAACCACTAA TTGGAAAAGT 1020
AATGGAAGTT TTTAAGCCAG GCGCTGTGAT TCTCCAATGT GGTGCCGACT CATTATCCGG 1080
GGATAGATTA GGATGCTTCA ATCTTTCAAT CAAGGGCCAT GCAGAGTGTG TTAAATTTAT 1140
GAGATCTTTT AATGTGCCAT TATTGCTATT GGGTGGTGGT GGCTACACCA TTCGAAATGT 1200
CGCTCGCTGC TGGTGCTATG AGACTGGAGT TGCACTTGGA ATAGAAGTTG ATGATAAGAT 1260
GCCTCAGCAT GAGTATTATG AGTACTTCGG TCCAGATTAT ACTCTTCATG TTGCCCCTAG 1320
CAACATGGAA AATAAGAATT CCCACCAGGT ACTTGAGGAA ATACGGTGCA AGCTCCTTGA 1380
TAATCTTTCA AAGCTTCAGC ATGCACCCAG TGTCCAATTT CAGGAAAGAG TACCTGATAC 1440
TGAGCTTCCG GAGGCAGAAG AAGAACAGAA TGAAGCAGAT GAGAGATGGG ATCCAGATTC 1500
CGACATGGAT GTTGATGAAG AACGCAAGCC ATTACCAGGC AGAGTCAAGA GAGAAATAGT 1560
TGAAGCTGAG CCAAAAGAGT CGGAGGGCCA GAAAGGAAGT TCTGGGCATG CTAGAGGCTT 1620
TGATACAACA ATAGCCGAGA ATGCAAGTGG AAAGGCTCTG GATGCTGGTC CTAAGCAAAT 1680
TGATGAGGCA GGTGTGAGAG TTGAGCAGGA GAATGTGAAC AAGGCATCTT CTGATCAGAT 1740
GTTCTCCAAG TCATGAGTAA AAAGTACCAT TCCACAAACT GTTCTAAGTT TGTGTATGGT 1800
TTCTCGAGCT CTGCATATAC GAATACAAAC TTGTAAAAGC CTTGAAAACC TGAATGGTTT 1860
CATCTCTGAA TACGGGTTAT TTAGTTAATG CAATGTGTAC TGGATGTTAT GGAAACTTCG 1920
ATTTGAAATT CAAAATAGAG AAAAAAAATA TTTAATGGAA TTCAATTATT TTTTTT 1977
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0026 EOX98961 Theobroma cacao 88 0.0 880
WERAM-Viv-0012 VIT_03s0038g04240.t01 Vitis vinifera 87 0.0 872
WERAM-Glm-0156 GLYMA13G06010.3 Glycine max 85 0.0 836
WERAM-Prp-0056 EMJ02177 Prunus persica 85 0.0 822
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 83 0.0 819
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 83 0.0 815
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 83 0.0 814
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 83 0.0 814
WERAM-Met-0084 KEH36404 Medicago truncatula 83 0.0 812
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 84 0.0 811
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 77 0.0 790
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 76 0.0 764
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 82 0.0 749
WERAM-Sei-0069 Si016908m Setaria italica 77 0.0 749
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 77 0.0 748
WERAM-Sob-0066 Sb04g007470.1 Sorghum bicolor 77 0.0 747
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 76 0.0 747
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 76 0.0 746
WERAM-Zem-0099 GRMZM2G172883_P01 Zea mays 77 0.0 746
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 76 0.0 744
WERAM-Amt-0016 ERM94967 Amborella trichopoda 77 0.0 741
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 75 0.0 739
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 75 0.0 737
WERAM-Aet-0051 EMT16627 Aegilops tauschii 76 0.0 734
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 83 0.0 733
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 84 0.0 726
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 81 0.0 726
WERAM-Orni-0020 ONIVA02G09910.1 Oryza nivara 76 0.0 710
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 70 0.0 699
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 84 0.0 695
WERAM-Hov-0099 MLOC_71091.1 Hordeum vulgare 88 0.0 693
WERAM-Mua-0048 GSMUA_Achr2P19590_001 Musa acuminata 67 0.0 650
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 71 1e-170 597
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 70 6e-170 594
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 70 1e-169 593
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 69 3e-169 592
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 69 6e-169 591
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 69 8e-169 590
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 69 8e-169 590
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 69 8e-169 590
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 69 8e-169 590
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 69 8e-169 590
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 69 9e-169 590
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 69 9e-169 590
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 69 9e-169 590
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 69 1e-168 590
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 69 1e-168 590
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 69 1e-168 590
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 69 1e-168 590
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 69 2e-168 590
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 69 8e-168 587
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 69 1e-167 587
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 69 3e-167 585
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 68 4e-167 585
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 68 7e-166 581
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 69 3e-165 579
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 67 4e-165 578
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 68 8e-164 574
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 69 2e-163 572
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 66 5e-163 571
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 67 7e-163 571
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 69 9e-163 570
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 69 1e-162 570
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 70 1e-162 570
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 68 2e-162 570
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 57 3e-162 569
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 56 3e-162 569
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 61 5e-162 568
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 70 6e-162 568
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 66 8e-162 567
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 69 8e-162 567
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 69 4e-161 565
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 68 4e-161 565
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 68 6e-161 564
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 68 6e-161 564
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 61 6e-161 564
WERAM-Xim-0229 ENSXMAP00000019038.1 Xiphophorus maculatus 69 9e-161 564
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 68 2e-160 562
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 57 4e-160 561
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 57 8e-160 561
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 57 8e-160 560
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 57 9e-160 560
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 57 1e-159 560
WERAM-Tru-0006 TRIUR3_03674-P1 Triticum urartu 70 6e-159 558
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 69 9e-155 544
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 57 2e-154 543
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 68 3e-154 542
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 62 4e-153 538
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 62 1e-152 536
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 59 2e-152 536
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 61 5e-152 535
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 57 6e-152 534
WERAM-Trv-0003 EHK19072 Trichoderma virens 61 1e-151 534
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 62 1e-151 534
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 61 1e-151 533
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 63 2e-151 533
WERAM-Cym-0014 CMJ129CT Cyanidioschyzon merolae 64 2e-150 530
WERAM-Coi-0024 EAS33504 Coccidioides immitis 61 2e-150 529
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 61 3e-150 529
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 61 5e-150 528
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 66 5e-150 528
WERAM-Ved-0020 EGY15146 Verticillium dahliae 55 5e-150 528
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 61 9e-150 527
WERAM-Trr-0017 EGR48353 Trichoderma reesei 61 3e-149 526
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 58 4e-148 522
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 61 5e-148 521
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 69 6e-148 521
WERAM-Cag-0003 CAG57932 Candida glabrata 60 2e-147 520
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 56 3e-147 519
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 60 4e-147 518
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 61 6e-147 518
Created Date 25-Jun-2016