| Tag |
Content |
| WERAM ID |
WERAM-Sob-0066 |
| Ensembl Protein ID |
Sb04g007470.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
1.90e-164 |
547.5 |
23 |
333 |
|
| Organism |
Sorghum bicolor |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfd 96
++v+y+yd+dvg+y+ygq+hpmkp+r+++th+L+ ygl +++++++p+ a+ ++l++fh+++yi+fl++v+pe++++ ++ lk+fnvgedcPvfd
Sb04g007470.1 23 RRVCYFYDSDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMQVYRPNPARDRDLCRFHADDYINFLRSVTPETQQDQIRLLKRFNVGEDCPVFD 118
589********************************************************************************************* PP
class-1.txt 97 glfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhk 192
gl+++cq+++Gas+ +a kLn++ diainw+GGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgveeafyttdrvmtvsfhk
Sb04g007470.1 119 GLYSFCQTYAGASVGGAVKLNHG-HDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHK 213
********************997.59********************************************************************** PP
class-1.txt 193 ygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpl 288
+g+ +fPgtGd++d+g+ kgkyy++nvPl+dgidDesy+++fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+fnlsi+ghaecv++++sfn+pl
Sb04g007470.1 214 FGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRYMRSFNVPL 308
***.******************************************************************************************** PP
class-1.txt 289 lvlGGGGYtlrnvaRcwtyetavvl 313
l+lGGGGYt+rnvaRcw+yet+v+l
Sb04g007470.1 309 LLLGGGGYTIRNVARCWCYETGVAL 333
**********************986 PP
|
Protein Sequence
(Fasta) | MDPSSAGSGG NSLPSVGADG QKRRVCYFYD SDVGNYYYGQ GHPMKPHRIR MTHSLLARYG 60
LLNQMQVYRP NPARDRDLCR FHADDYINFL RSVTPETQQD QIRLLKRFNV GEDCPVFDGL 120
YSFCQTYAGA SVGGAVKLNH GHDIAINWSG GLHHAKKCEA SGFCYVNDIV LAILELLKHH 180
ERVLYVDIDI HHGDGVEEAF YTTDRVMTVS FHKFGDYFPG TGDIRDIGHS KGKYYSLNVP 240
LDDGIDDESY QSLFKPIMGK VMEVFRPGAV VLQCGADSLS GDRLGCFNLS IRGHAECVRY 300
MRSFNVPLLL LGGGGYTIRN VARCWCYETG VALGQELEDK MPVNEYYEYF GPDYTLHVAP 360
SNMENKNTRN QLDDIRSKLL DNLSKLRHAP SVQFQERVPD TEVPEPDEDQ DDPDERHDPD 420
SDMEVDDHKA VEESARRSIP GIKVKREFGE NETKVQDGGR IASDHRGVEP MAEDIGSSKQ 480
APQADASAMA VDEPSNVKNE PESSTKLQDQ AAAYHKP 517Protein Fasta Sequence
>Sb04g007470.1|Class-I|Sorghum bicolor
MDPSSAGSGGNSLPSVGADGQKRRVCYFYDSDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMQVYRPNPARDRDLCRFHADDYINFLRSVTPETQQDQIRLLKRFNVGEDCPVFDGLYSFCQTYAGASVGGAVKLNHGHDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGQELEDKMPVNEYYEYFGPDYTLHVAPSNMENKNTRNQLDDIRSKLLDNLSKLRHAPSVQFQERVPDTEVPEPDEDQDDPDERHDPDSDMEVDDHKAVEESARRSIPGIKVKREFGENETKVQDGGRIASDHRGVEPMAEDIGSSKQAPQADASAMAVDEPSNVKNEPESSTKLQDQAAAYHKP |
Nucleotide Sequence
(Fasta) | ATTTTCTTCT GAAAACCGAA GGCTCCGGCA TCCGCCTGAA AGGGGAAAAA AAAAAAACCC 60
ACACAAACAC CAAATCCCCT GCGGCGGCGG CGGCGGCGAT GGACCCGTCA TCGGCGGGCT 120
CCGGCGGCAA CTCCCTCCCG TCCGTTGGCG CCGACGGGCA GAAGCGGCGC GTGTGCTACT 180
TCTACGACTC GGATGTGGGC AACTACTACT ACGGGCAGGG CCATCCGATG AAGCCGCACC 240
GCATCCGGAT GACGCACTCG CTGCTGGCGC GCTACGGCCT CCTCAACCAG ATGCAGGTGT 300
ACCGCCCCAA CCCGGCCCGC GACCGCGACC TCTGCCGCTT CCACGCCGAC GACTACATCA 360
ACTTCCTGCG CTCCGTCACG CCCGAGACGC AGCAGGACCA GATCCGCCTG CTCAAGCGCT 420
TCAACGTCGG CGAGGACTGC CCCGTCTTCG ACGGCCTCTA CAGCTTCTGC CAGACCTACG 480
CGGGCGCCTC CGTCGGCGGG GCCGTCAAGC TCAACCACGG CCACGACATC GCAATCAACT 540
GGTCCGGCGG CCTGCACCAC GCCAAAAAGT GCGAGGCGTC GGGCTTCTGC TACGTCAACG 600
ACATCGTGCT CGCCATACTC GAGCTGCTCA AGCATCACGA GAGAGTTCTG TATGTCGACA 660
TCGATATCCA CCATGGGGAT GGAGTGGAGG AGGCTTTCTA CACAACAGAC AGGGTTATGA 720
CAGTCTCGTT CCACAAGTTT GGGGATTATT TCCCAGGAAC AGGGGATATC CGTGACATTG 780
GGCACTCAAA GGGGAAGTAC TACTCCCTGA ATGTCCCTCT GGATGATGGG ATTGATGATG 840
AAAGCTACCA GTCTCTTTTC AAGCCAATCA TGGGCAAAGT TATGGAGGTT TTCCGCCCTG 900
GTGCAGTTGT GCTTCAGTGT GGTGCTGATT CCTTGTCTGG GGATAGGTTG GGTTGCTTCA 960
ACCTCTCAAT CAGAGGTCAT GCGGAATGTG TTAGGTACAT GAGGTCTTTC AACGTTCCAT 1020
TGTTGCTCCT TGGCGGTGGT GGATATACCA TAAGAAATGT TGCACGCTGT TGGTGTTATG 1080
AGACGGGAGT TGCTCTTGGC CAAGAGCTTG AAGACAAGAT GCCTGTCAAC GAGTACTATG 1140
AATACTTCGG TCCAGATTAC ACTCTTCATG TTGCACCAAG TAACATGGAG AACAAAAATA 1200
CACGAAACCA ACTGGATGAT ATAAGATCTA AACTTCTGGA TAATCTTTCA AAACTTCGAC 1260
ATGCTCCTAG CGTCCAGTTT CAAGAGAGAG TTCCTGACAC CGAAGTACCT GAGCCAGATG 1320
AAGATCAAGA TGATCCAGAT GAACGGCATG ATCCTGACTC TGATATGGAA GTGGATGATC 1380
ACAAGGCTGT GGAAGAGTCA GCGAGGAGGA GCATTCCAGG TATAAAAGTT AAGAGAGAAT 1440
TTGGTGAAAA TGAGACCAAA GTGCAGGATG GTGGCAGAAT TGCATCTGAC CATAGAGGAG 1500
TGGAACCCAT GGCAGAAGAC ATTGGTTCTT CCAAGCAAGC TCCTCAGGCG GATGCCAGTG 1560
CGATGGCTGT TGATGAGCCA AGCAATGTTA AGAATGAACC TGAGAGCTCA ACTAAATTGC 1620
AAGATCAAGC AGCTGCATAC CACAAGCCAT AACTGCGACA TCTGGAGTTG CCGGGTTTCT 1680
GCTGGGCAGC AGCTTCCTGC GTGCTTTTGA CAGTCCGAAG ACCGAAGTGA ATCTGCAATA 1740
CAACCCCGCC ATTTCAAATT TGACTTGAGC TATACCATAC CTATCTGTAT GTGTAATATG 1800
TTAATGTGAT GGGATTCCAT GGCGGGGTAG TGCAGTTTCC ATGAGTCCAC CTGGGATTGC 1860
TTGAGGTTGA CGAGGTAAAC GGTAGTCTGA CCCATGTATA CATGAAGCGT ATGAGTTAAG 1920
TTGTACAGTC ATTAGTTAAT GCAAATATGC AGTAAACTTC TGGGTAAAAT CTTTGCGTGT 1980
G
1982Nucleotide Fasta Sequence
>Sb04g007470.1|Class-I|Sorghum bicolor
ATTTTCTTCTGAAAACCGAAGGCTCCGGCATCCGCCTGAAAGGGGAAAAAAAAAAAACCCACACAAACACCAAATCCCCTGCGGCGGCGGCGGCGGCGATGGACCCGTCATCGGCGGGCTCCGGCGGCAACTCCCTCCCGTCCGTTGGCGCCGACGGGCAGAAGCGGCGCGTGTGCTACTTCTACGACTCGGATGTGGGCAACTACTACTACGGGCAGGGCCATCCGATGAAGCCGCACCGCATCCGGATGACGCACTCGCTGCTGGCGCGCTACGGCCTCCTCAACCAGATGCAGGTGTACCGCCCCAACCCGGCCCGCGACCGCGACCTCTGCCGCTTCCACGCCGACGACTACATCAACTTCCTGCGCTCCGTCACGCCCGAGACGCAGCAGGACCAGATCCGCCTGCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTACAGCTTCTGCCAGACCTACGCGGGCGCCTCCGTCGGCGGGGCCGTCAAGCTCAACCACGGCCACGACATCGCAATCAACTGGTCCGGCGGCCTGCACCACGCCAAAAAGTGCGAGGCGTCGGGCTTCTGCTACGTCAACGACATCGTGCTCGCCATACTCGAGCTGCTCAAGCATCACGAGAGAGTTCTGTATGTCGACATCGATATCCACCATGGGGATGGAGTGGAGGAGGCTTTCTACACAACAGACAGGGTTATGACAGTCTCGTTCCACAAGTTTGGGGATTATTTCCCAGGAACAGGGGATATCCGTGACATTGGGCACTCAAAGGGGAAGTACTACTCCCTGAATGTCCCTCTGGATGATGGGATTGATGATGAAAGCTACCAGTCTCTTTTCAAGCCAATCATGGGCAAAGTTATGGAGGTTTTCCGCCCTGGTGCAGTTGTGCTTCAGTGTGGTGCTGATTCCTTGTCTGGGGATAGGTTGGGTTGCTTCAACCTCTCAATCAGAGGTCATGCGGAATGTGTTAGGTACATGAGGTCTTTCAACGTTCCATTGTTGCTCCTTGGCGGTGGTGGATATACCATAAGAAATGTTGCACGCTGTTGGTGTTATGAGACGGGAGTTGCTCTTGGCCAAGAGCTTGAAGACAAGATGCCTGTCAACGAGTACTATGAATACTTCGGTCCAGATTACACTCTTCATGTTGCACCAAGTAACATGGAGAACAAAAATACACGAAACCAACTGGATGATATAAGATCTAAACTTCTGGATAATCTTTCAAAACTTCGACATGCTCCTAGCGTCCAGTTTCAAGAGAGAGTTCCTGACACCGAAGTACCTGAGCCAGATGAAGATCAAGATGATCCAGATGAACGGCATGATCCTGACTCTGATATGGAAGTGGATGATCACAAGGCTGTGGAAGAGTCAGCGAGGAGGAGCATTCCAGGTATAAAAGTTAAGAGAGAATTTGGTGAAAATGAGACCAAAGTGCAGGATGGTGGCAGAATTGCATCTGACCATAGAGGAGTGGAACCCATGGCAGAAGACATTGGTTCTTCCAAGCAAGCTCCTCAGGCGGATGCCAGTGCGATGGCTGTTGATGAGCCAAGCAATGTTAAGAATGAACCTGAGAGCTCAACTAAATTGCAAGATCAAGCAGCTGCATACCACAAGCCATAACTGCGACATCTGGAGTTGCCGGGTTTCTGCTGGGCAGCAGCTTCCTGCGTGCTTTTGACAGTCCGAAGACCGAAGTGAATCTGCAATACAACCCCGCCATTTCAAATTTGACTTGAGCTATACCATACCTATCTGTATGTGTAATATGTTAATGTGATGGGATTCCATGGCGGGGTAGTGCAGTTTCCATGAGTCCACCTGGGATTGCTTGAGGTTGACGAGGTAAACGGTAGTCTGACCCATGTATACATGAAGCGTATGAGTTAAGTTGTACAGTCATTAGTTAATGCAAATATGCAGTAAACTTCTGGGTAAAATCTTTGCGTGTG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
