| Tag |
Content |
| WERAM ID |
WERAM-Viv-0086 |
| Ensembl Protein ID |
VIT_14s0006g01820.t01 |
| Gene Name |
VIT_14s0006g01820 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
4.00e-165 |
549.5 |
17 |
328 |
|
| Organism |
Vitis vinifera |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnv 88
+kv+y+yd++vg+y+ygq+hpmkp+r+++th L+ +ygl ++++++kp a+ ++l++fh+++y++fl+ ++pe++++ ++lk+fnv
VIT_14s0006g01820.t01 17 RKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPCPARDRDLCRFHADDYVSFLRGITPETQQDQLRQLKRFNV 104
589************************************************************************************* PP
class-1.txt 89 gedcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgve 176
gedcPvfdgl+++cq+++G+s+ +a kLn++ +diainwaGGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgve
VIT_14s0006g01820.t01 105 GEDCPVFDGLYSFCQTYAGGSVGGAVKLNHGFCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVE 192
**************************************************************************************** PP
class-1.txt 177 eafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrl 264
eafyttdrvmtvsfhk+g+ +fPgtGd++d+g +kgkyy++nvPl+dgidDesy+ +fk++i kv+e+f+P avvlqcGaDsl+gDrl
VIT_14s0006g01820.t01 193 EAFYTTDRVMTVSFHKFGD-YFPGTGDIRDIGFGKGKYYSLNVPLDDGIDDESYHCLFKPIIGKVMEIFRPGAVVLQCGADSLSGDRL 279
*******************.******************************************************************** PP
class-1.txt 265 gefnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
g+fnlsikghaecv+f++sfn+pll+lGGGGYt+rnvaRcw+yet+v+l
VIT_14s0006g01820.t01 280 GCFNLSIKGHAECVRFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVAL 328
**********************************************986 PP
|
Protein Sequence
(Fasta) | MDTGGNSLPS GADGVKRKVS YFYDPEVGNY YYGQGHPMKP HRIRMTHALL AHYGLLQHMQ 60
VLKPCPARDR DLCRFHADDY VSFLRGITPE TQQDQLRQLK RFNVGEDCPV FDGLYSFCQT 120
YAGGSVGGAV KLNHGFCDIA INWAGGLHHA KKCEASGFCY VNDIVLAILE LLKQHERVLY 180
VDIDIHHGDG VEEAFYTTDR VMTVSFHKFG DYFPGTGDIR DIGFGKGKYY SLNVPLDDGI 240
DDESYHCLFK PIIGKVMEIF RPGAVVLQCG ADSLSGDRLG CFNLSIKGHA ECVRFMRSFN 300
VPLLLLGGGG YTIRNVARCW CYETGVALGI EVDDKMPQHE YYEYFGPDYT LHVAPSNMEN 360
KNSHQLLDEI RAKLLDNLST LRHAPSVQFQ ERPPDTELPE ADEDHDDGDE RWDPDSDMEI 420
DDERKSLPGR VKREIVEPES KDLEDKKGVA EHSRGFDTTA EETACSKASD VCPMPIDEPS 480
VKVEQESLNK PFDQPAPTFP KS 502Protein Fasta Sequence
>VIT_14s0006g01820.t01|Class-I|Vitis vinifera
MDTGGNSLPSGADGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPCPARDRDLCRFHADDYVSFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHGFCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGFGKGKYYSLNVPLDDGIDDESYHCLFKPIIGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSHQLLDEIRAKLLDNLSTLRHAPSVQFQERPPDTELPEADEDHDDGDERWDPDSDMEIDDERKSLPGRVKREIVEPESKDLEDKKGVAEHSRGFDTTAEETACSKASDVCPMPIDEPSVKVEQESLNKPFDQPAPTFPKS |
Nucleotide Sequence
(Fasta) | CTTTGATGGA GTGTTGAGGA GCGATATTTT TTCTAGTCCA ACAAGAAAAT AGGTCGGAGT 60
GCATCCTAAG GTGAAAAGCA TTATTGGCCA ATGGATACGG GAGGCAATTC CCTTCCATCT 120
GGAGCTGATG GGGTGAAGAG AAAAGTGTCA TATTTCTATG ATCCAGAGGT TGGAAATTAC 180
TACTATGGGC AGGGCCACCC CATGAAGCCA CATAGGATTA GAATGACACA TGCTCTTCTA 240
GCCCACTATG GATTGCTTCA GCATATGCAG GTTCTGAAGC CCTGTCCTGC CAGAGATAGA 300
GATCTTTGCC GGTTTCATGC GGATGATTAT GTCTCTTTTC TGAGGGGTAT CACCCCTGAA 360
ACACAACAGG ATCAGCTGAG GCAACTAAAG CGTTTCAATG TTGGTGAAGA CTGCCCTGTA 420
TTTGATGGTC TCTACTCTTT CTGTCAAACT TATGCTGGTG GGTCAGTTGG TGGTGCGGTC 480
AAGCTAAATC ATGGTTTCTG TGATATTGCT ATCAACTGGG CTGGTGGGCT GCATCATGCT 540
AAGAAGTGTG AGGCTTCTGG ATTTTGCTAT GTGAATGACA TTGTCCTGGC AATCTTGGAG 600
CTTCTTAAAC AGCATGAGCG TGTTTTATAC GTGGATATCG ATATCCACCA TGGAGATGGT 660
GTGGAGGAGG CTTTCTACAC AACTGACAGG GTCATGACTG TTTCATTTCA CAAATTTGGT 720
GATTATTTTC CTGGTACAGG GGATATACGT GATATTGGAT TTGGGAAAGG GAAATATTAC 780
TCCCTTAATG TTCCATTAGA TGATGGGATT GACGACGAGA GCTACCATTG CTTGTTCAAA 840
CCGATAATTG GAAAAGTGAT GGAAATTTTT AGACCTGGTG CTGTGGTTCT CCAGTGTGGT 900
GCTGACTCCT TATCTGGGGA CAGGTTAGGA TGCTTCAATC TTTCAATCAA AGGTCATGCA 960
GAGTGTGTTC GGTTTATGAG ATCATTCAAT GTGCCACTAT TGCTGCTGGG TGGTGGTGGT 1020
TACACCATCA GGAATGTTGC TCGTTGCTGG TGCTATGAGA CGGGAGTTGC GCTTGGAATA 1080
GAAGTTGATG ACAAGATGCC ACAGCATGAG TACTACGAGT ATTTTGGTCC GGACTATACT 1140
CTTCATGTTG CCCCGAGTAA CATGGAAAAT AAAAATTCAC ACCAGTTACT GGATGAAATA 1200
AGGGCTAAGC TTCTCGACAA TCTATCAACA CTTAGACATG CACCTAGTGT CCAATTTCAG 1260
GAAAGACCCC CTGATACAGA GCTCCCTGAG GCTGATGAAG ACCACGACGA TGGAGATGAG 1320
AGATGGGATC CAGATTCTGA CATGGAAATT GATGATGAGC GTAAGTCTCT ACCAGGCAGA 1380
GTAAAGAGAG AAATTGTCGA ACCAGAGAGT AAAGATTTGG AGGACAAGAA AGGAGTTGCT 1440
GAGCACTCAA GAGGCTTTGA TACAACTGCG GAGGAGACTG CATGCTCAAA GGCTTCAGAT 1500
GTGTGCCCTA TGCCAATAGA TGAACCAAGT GTGAAAGTTG AACAAGAGAG CTTGAACAAG 1560
CCATTTGATC AGCCTGCCCC GACGTTCCCG AAGTCATGAG CAACTTTATT GCATGGATGG 1620
CAAGCATATG TTGGCAAGTA TTTTGCATAG TAGAATTATT TAGTACATTG AGTAAACTGC 1680
AGACCTGTAA ATGGATGAGG AAGAAACCCA AAAATTTGGT GTCTTAAAAG AGCTGCGTAG 1740
AGTTGAAATT ATGAGTGAAG GTTTAAATTA AAGCGGGAAA TGTGTTGTGA TGGTTGGACC 1800
TTTGAACAAG GACTCTTAAC CATAGAATGG GTCATTCAAT GTTGATATTG TAAAAGCAAC 1860
TTCATATCTA TGTACTTGTA ACTAAGCCTT ATGTTCCATA CCTTTTCTCA TGTTATTTGG 1920
TGAAGTTATC ACCTGTCC
1939Nucleotide Fasta Sequence
>VIT_14s0006g01820.t01|Class-I|Vitis vinifera
CTTTGATGGAGTGTTGAGGAGCGATATTTTTTCTAGTCCAACAAGAAAATAGGTCGGAGTGCATCCTAAGGTGAAAAGCATTATTGGCCAATGGATACGGGAGGCAATTCCCTTCCATCTGGAGCTGATGGGGTGAAGAGAAAAGTGTCATATTTCTATGATCCAGAGGTTGGAAATTACTACTATGGGCAGGGCCACCCCATGAAGCCACATAGGATTAGAATGACACATGCTCTTCTAGCCCACTATGGATTGCTTCAGCATATGCAGGTTCTGAAGCCCTGTCCTGCCAGAGATAGAGATCTTTGCCGGTTTCATGCGGATGATTATGTCTCTTTTCTGAGGGGTATCACCCCTGAAACACAACAGGATCAGCTGAGGCAACTAAAGCGTTTCAATGTTGGTGAAGACTGCCCTGTATTTGATGGTCTCTACTCTTTCTGTCAAACTTATGCTGGTGGGTCAGTTGGTGGTGCGGTCAAGCTAAATCATGGTTTCTGTGATATTGCTATCAACTGGGCTGGTGGGCTGCATCATGCTAAGAAGTGTGAGGCTTCTGGATTTTGCTATGTGAATGACATTGTCCTGGCAATCTTGGAGCTTCTTAAACAGCATGAGCGTGTTTTATACGTGGATATCGATATCCACCATGGAGATGGTGTGGAGGAGGCTTTCTACACAACTGACAGGGTCATGACTGTTTCATTTCACAAATTTGGTGATTATTTTCCTGGTACAGGGGATATACGTGATATTGGATTTGGGAAAGGGAAATATTACTCCCTTAATGTTCCATTAGATGATGGGATTGACGACGAGAGCTACCATTGCTTGTTCAAACCGATAATTGGAAAAGTGATGGAAATTTTTAGACCTGGTGCTGTGGTTCTCCAGTGTGGTGCTGACTCCTTATCTGGGGACAGGTTAGGATGCTTCAATCTTTCAATCAAAGGTCATGCAGAGTGTGTTCGGTTTATGAGATCATTCAATGTGCCACTATTGCTGCTGGGTGGTGGTGGTTACACCATCAGGAATGTTGCTCGTTGCTGGTGCTATGAGACGGGAGTTGCGCTTGGAATAGAAGTTGATGACAAGATGCCACAGCATGAGTACTACGAGTATTTTGGTCCGGACTATACTCTTCATGTTGCCCCGAGTAACATGGAAAATAAAAATTCACACCAGTTACTGGATGAAATAAGGGCTAAGCTTCTCGACAATCTATCAACACTTAGACATGCACCTAGTGTCCAATTTCAGGAAAGACCCCCTGATACAGAGCTCCCTGAGGCTGATGAAGACCACGACGATGGAGATGAGAGATGGGATCCAGATTCTGACATGGAAATTGATGATGAGCGTAAGTCTCTACCAGGCAGAGTAAAGAGAGAAATTGTCGAACCAGAGAGTAAAGATTTGGAGGACAAGAAAGGAGTTGCTGAGCACTCAAGAGGCTTTGATACAACTGCGGAGGAGACTGCATGCTCAAAGGCTTCAGATGTGTGCCCTATGCCAATAGATGAACCAAGTGTGAAAGTTGAACAAGAGAGCTTGAACAAGCCATTTGATCAGCCTGCCCCGACGTTCCCGAAGTCATGAGCAACTTTATTGCATGGATGGCAAGCATATGTTGGCAAGTATTTTGCATAGTAGAATTATTTAGTACATTGAGTAAACTGCAGACCTGTAAATGGATGAGGAAGAAACCCAAAAATTTGGTGTCTTAAAAGAGCTGCGTAGAGTTGAAATTATGAGTGAAGGTTTAAATTAAAGCGGGAAATGTGTTGTGATGGTTGGACCTTTGAACAAGGACTCTTAACCATAGAATGGGTCATTCAATGTTGATATTGTAAAAGCAACTTCATATCTATGTACTTGTAACTAAGCCTTATGTTCCATACCTTTTCTCATGTTATTTGGTGAAGTTATCACCTGTCC
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
