| Tag |
Content |
| WERAM ID |
WERAM-Sol-0138 |
| Ensembl Protein ID |
Solyc11g067020.1.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
4.00e-161 |
536.5 |
6 |
317 |
|
| Organism |
Solanum lycopersicum |
| Domain Profile |
HDAC Class-I
class-1.txt 2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedc 92
k++y+yd dvg++++g +hpmkp+rl++th+Lvl+ygl+ k+e+++p+ka el++fhs +y+efl++++p++++ +++e++++n+gedc
Solyc11g067020.1.1 6 KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLAYGLHSKMEVYRPHKAYPVELAQFHSADYVEFLNRITPDTQNLFPSEMARYNLGEDC 96
689**************************************************************************************** PP
class-1.txt 93 PvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttd 183
Pvfd+lfe+cq+++G++++aa++Ln+k +diainwaGGlhhakk+ asGfcy+nD+vl+ilellk+h+rvlyidid+hhGDgveeafy+td
Solyc11g067020.1.1 97 PVFDNLFEFCQIYAGGTIDAARRLNNKLCDIAINWAGGLHHAKKCAASGFCYINDLVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYFTD 187
******************************************************************************************* PP
class-1.txt 184 rvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikgh 274
rvmtvsfhkyg++ffPgtGd++d+g+ +g++y++nvPlkdgidD s++++fk++iskv+e++ P a+vlqcGaDslagDrlg+fnlsi+gh
Solyc11g067020.1.1 188 RVMTVSFHKYGDKFFPGTGDMKDTGERDGRFYSINVPLKDGIDDGSFTRLFKTIISKVVETYLPGAIVLQCGADSLAGDRLGCFNLSIDGH 278
******************************************************************************************* PP
class-1.txt 275 aecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
aecv+fvk+fnlpllv GGGGYt++nvaRcw+ et+v+l
Solyc11g067020.1.1 279 AECVRFVKKFNLPLLVTGGGGYTKENVARCWALETGVLL 317
*************************************97 PP
|
Protein Sequence
(Fasta) | MRSKDKISYF YDGDVGSVYF GPNHPMKPHR LCMTHHLVLA YGLHSKMEVY RPHKAYPVEL 60
AQFHSADYVE FLNRITPDTQ NLFPSEMARY NLGEDCPVFD NLFEFCQIYA GGTIDAARRL 120
NNKLCDIAIN WAGGLHHAKK CAASGFCYIN DLVLGILELL KYHPRVLYID IDVHHGDGVE 180
EAFYFTDRVM TVSFHKYGDK FFPGTGDMKD TGERDGRFYS INVPLKDGID DGSFTRLFKT 240
IISKVVETYL PGAIVLQCGA DSLAGDRLGC FNLSIDGHAE CVRFVKKFNL PLLVTGGGGY 300
TKENVARCWA LETGVLLDTE LPNEIPDNDY IKYFAPDYSL KLPGGHIENL NSKSYIGTIK 360
MQVMENLRCL QHAPSVQMQE VPPDFYIPDF DEDEQNPDER VNQHTQDKHI QRDDEYYEGD 420
HDNDNHTDDA Protein Fasta Sequence
>Solyc11g067020.1.1|Class-I|Solanum lycopersicum
MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLAYGLHSKMEVYRPHKAYPVELAQFHSADYVEFLNRITPDTQNLFPSEMARYNLGEDCPVFDNLFEFCQIYAGGTIDAARRLNNKLCDIAINWAGGLHHAKKCAASGFCYINDLVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDKFFPGTGDMKDTGERDGRFYSINVPLKDGIDDGSFTRLFKTIISKVVETYLPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWALETGVLLDTELPNEIPDNDYIKYFAPDYSLKLPGGHIENLNSKSYIGTIKMQVMENLRCLQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVNQHTQDKHIQRDDEYYEGDHDNDNHTDDA |
Nucleotide Sequence
(Fasta) | ATGAGGTCCA AGGACAAAAT CTCCTACTTC TACGACGGTG ATGTAGGAAG CGTATACTTT 60
GGACCGAATC ATCCAATGAA GCCGCACAGG TTGTGTATGA CTCATCATCT GGTTCTAGCT 120
TATGGTCTTC ACAGCAAGAT GGAAGTTTAT AGGCCTCACA AAGCATATCC AGTGGAGCTA 180
GCGCAGTTTC ATTCTGCTGA TTATGTAGAG TTCTTGAATA GAATAACCCC AGATACTCAG 240
AACTTGTTCC CTAGTGAAAT GGCAAGATAT AATCTTGGAG AAGATTGCCC TGTATTTGAC 300
AACTTATTCG AGTTTTGTCA AATATATGCT GGTGGGACAA TAGATGCTGC ACGTAGATTG 360
AATAATAAGC TTTGTGATAT TGCAATAAAT TGGGCTGGTG GCTTGCATCA TGCCAAGAAG 420
TGTGCGGCTT CAGGATTTTG CTATATCAAT GACCTAGTTC TGGGGATATT GGAGCTTCTG 480
AAGTATCATC CGCGGGTGCT CTATATTGAT ATTGATGTGC ATCATGGTGA TGGTGTAGAA 540
GAGGCCTTTT ATTTCACTGA CAGGGTAATG ACTGTTAGTT TCCACAAGTA TGGGGATAAG 600
TTCTTTCCTG GAACTGGTGA TATGAAGGAT ACAGGGGAAA GAGATGGAAG ATTCTATTCC 660
ATAAATGTGC CTCTCAAGGA TGGAATAGAT GATGGCAGTT TCACTAGACT CTTCAAAACA 720
ATTATTTCAA AGGTTGTTGA AACATATTTA CCTGGCGCAA TAGTTCTGCA ATGTGGGGCA 780
GATTCGCTTG CTGGAGACCG TCTGGGCTGC TTCAACCTCT CTATTGATGG ACATGCTGAA 840
TGTGTAAGGT TTGTGAAGAA ATTTAATTTG CCACTGCTGG TAACTGGAGG TGGGGGATAC 900
ACAAAAGAGA ATGTCGCCCG TTGTTGGGCT CTGGAAACTG GAGTTCTTTT AGACACAGAA 960
CTTCCTAATG AAATACCAGA CAATGATTAC ATCAAATATT TTGCCCCTGA TTATTCGCTG 1020
AAGCTTCCTG GTGGACACAT AGAGAACCTG AATAGCAAAT CATACATTGG CACCATAAAA 1080
ATGCAAGTGA TGGAAAATCT CCGTTGCCTC CAGCATGCTC CGAGCGTACA GATGCAAGAG 1140
GTACCACCTG ACTTTTATAT TCCTGATTTT GATGAAGATG AACAAAATCC AGATGAGCGC 1200
GTGAATCAAC ATACCCAAGA TAAGCATATC CAACGTGACG ATGAGTATTA TGAAGGCGAC 1260
CATGACAACG ATAACCACAC TGATGATGCC TAA
1294Nucleotide Fasta Sequence
>Solyc11g067020.1.1|Class-I|Solanum lycopersicum
ATGAGGTCCAAGGACAAAATCTCCTACTTCTACGACGGTGATGTAGGAAGCGTATACTTTGGACCGAATCATCCAATGAAGCCGCACAGGTTGTGTATGACTCATCATCTGGTTCTAGCTTATGGTCTTCACAGCAAGATGGAAGTTTATAGGCCTCACAAAGCATATCCAGTGGAGCTAGCGCAGTTTCATTCTGCTGATTATGTAGAGTTCTTGAATAGAATAACCCCAGATACTCAGAACTTGTTCCCTAGTGAAATGGCAAGATATAATCTTGGAGAAGATTGCCCTGTATTTGACAACTTATTCGAGTTTTGTCAAATATATGCTGGTGGGACAATAGATGCTGCACGTAGATTGAATAATAAGCTTTGTGATATTGCAATAAATTGGGCTGGTGGCTTGCATCATGCCAAGAAGTGTGCGGCTTCAGGATTTTGCTATATCAATGACCTAGTTCTGGGGATATTGGAGCTTCTGAAGTATCATCCGCGGGTGCTCTATATTGATATTGATGTGCATCATGGTGATGGTGTAGAAGAGGCCTTTTATTTCACTGACAGGGTAATGACTGTTAGTTTCCACAAGTATGGGGATAAGTTCTTTCCTGGAACTGGTGATATGAAGGATACAGGGGAAAGAGATGGAAGATTCTATTCCATAAATGTGCCTCTCAAGGATGGAATAGATGATGGCAGTTTCACTAGACTCTTCAAAACAATTATTTCAAAGGTTGTTGAAACATATTTACCTGGCGCAATAGTTCTGCAATGTGGGGCAGATTCGCTTGCTGGAGACCGTCTGGGCTGCTTCAACCTCTCTATTGATGGACATGCTGAATGTGTAAGGTTTGTGAAGAAATTTAATTTGCCACTGCTGGTAACTGGAGGTGGGGGATACACAAAAGAGAATGTCGCCCGTTGTTGGGCTCTGGAAACTGGAGTTCTTTTAGACACAGAACTTCCTAATGAAATACCAGACAATGATTACATCAAATATTTTGCCCCTGATTATTCGCTGAAGCTTCCTGGTGGACACATAGAGAACCTGAATAGCAAATCATACATTGGCACCATAAAAATGCAAGTGATGGAAAATCTCCGTTGCCTCCAGCATGCTCCGAGCGTACAGATGCAAGAGGTACCACCTGACTTTTATATTCCTGATTTTGATGAAGATGAACAAAATCCAGATGAGCGCGTGAATCAACATACCCAAGATAAGCATATCCAACGTGACGATGAGTATTATGAAGGCGACCATGACAACGATAACCACACTGATGATGCCTAA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
