WERAM Information

Tag Content
WERAM ID WERAM-Orla-0093
Ensembl Protein ID ENSORLP00000011294.1
Gene Name hdac3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSORLG00000009006.1 ENSORLT00000011295.1 ENSORLP00000011294.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 9.40e-169 561.1 4 389
Organism Oryzias latipes
Domain Profile
  HDAC Class-I
           class-1.txt   2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90 
                           + +y+yd+dvg++hyg++hpmkp+rlslth+Lvl+ygl+kk+ ++kp kas++++++fhse+yi+fl+kv+p+n++ ++k+l+ fnvg+
  ENSORLP00000011294.1   4 RTSYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGD 92 
                           579************************************************************************************** PP
           class-1.txt  91 dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeaf 179
                           dcPvf glfe+c+ +tGasl++a++Ln+k +diainwaGGlhhakk easGfcyvnDiv++ilellk+h+rvlyidid+hhGDgv+eaf
  ENSORLP00000011294.1  93 DCPVFPGLFEFCSRYTGASLQGATQLNHKICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAF 181
                           ***************************************************************************************** PP
           class-1.txt 180 yttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefn 268
                           y tdrvmtvsfhkyg++ffPgtGd+++vgae+g+yy++nvPl+dgidD+sy+++f++vi++v++ ++P+++vlqcGaDsl +Drlg+fn
  ENSORLP00000011294.1 182 YLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQVVDYYQPTCIVLQCGADSLGCDRLGCFN 270
                           ***************************************************************************************** PP
           class-1.txt 269 lsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                           lsi+gh+ecv+fvksf++pllvlGGGGYt+rnvaRcwtyet+++l
  ENSORLP00000011294.1 271 LSIRGHGECVEFVKSFKIPLLVLGGGGYTVRNVARCWTYETSLLL 315
                           ******************************************986 PP
           class-1.txt 227 Desyekifksviskv.ieafePeavvlqcGaDslagDr 263
                            +++e+i ++v +++ +  + P++ + ++ +D l+ +r
  ENSORLP00000011294.1 352 RQYLEQIRQTVFENLkMLNHAPSVQIHDVPSDMLSYER 389
                           45677778888877634568888888888888887766 PP
Protein Sequence
(Fasta)		MSIRTSYFYD PDVGNFHYGA GHPMKPHRLS LTHSLVLHYG LYKKMMVFKP YKASQHDMCR 60
FHSEDYIDFL QKVSPNNMQG FTKSLNTFNV GDDCPVFPGL FEFCSRYTGA SLQGATQLNH 120
KICDIAINWA GGLHHAKKFE ASGFCYVNDI VISILELLKY HPRVLYIDID IHHGDGVQEA 180
FYLTDRVMTV SFHKYGNYFF PGTGDMYEVG AESGRYYCLN VPLRDGIDDQ SYRQLFQPVI 240
KQVVDYYQPT CIVLQCGADS LGCDRLGCFN LSIRGHGECV EFVKSFKIPL LVLGGGGYTV 300
RNVARCWTYE TSLLLEESIS DELPYSEYFE YFAPDFTLHP DVSTRIENQN SRQYLEQIRQ 360
TVFENLKMLN HAPSVQIHDV PSDMLSYERT DDPDPDERGA EENYTRQEAA NEFYDGDHDN 420
DKESDVEI 428
Nucleotide Sequence
(Fasta)		GTCACCTTTA AATGTTTACG GTTAGCCGTT AGCGGCAGGA AAAATGCGGC AGACTGAGCC 60
GCTCTTTAAA AAGTAAAACC TCGCTGAATC TCAGGATTAT TATTATTTTT TTTACATTTA 120
AAATGTCTAT TAGGACGTCT TACTTTTACG ACCCAGATGT GGGAAACTTT CATTACGGTG 180
CCGGTCATCC CATGAAGCCT CACCGTTTGT CTCTCACCCA CAGTCTGGTG TTGCATTATG 240
GGTTATATAA AAAGATGATG GTTTTTAAGC CGTACAAAGC CTCTCAGCAC GACATGTGCC 300
GGTTCCACTC TGAAGATTAC ATCGACTTCC TGCAGAAGGT CAGCCCCAAC AACATGCAGG 360
GCTTCACCAA GAGCCTGAAC ACCTTCAACG TTGGAGATGA CTGTCCTGTG TTTCCAGGAC 420
TCTTTGAGTT CTGTTCCAGA TACACGGGGG CGTCTCTGCA GGGCGCCACG CAGCTCAACC 480
ACAAGATCTG TGACATCGCC ATCAACTGGG CTGGAGGTTT GCATCACGCC AAAAAATTTG 540
AGGCGTCGGG ATTTTGCTAC GTGAACGACA TCGTCATCAG CATCCTGGAG CTTCTCAAGT 600
ACCACCCCCG AGTTCTGTAC ATCGACATCG ACATTCACCA CGGAGACGGC GTCCAGGAGG 660
CCTTTTACCT GACGGACAGA GTCATGACCG TGTCCTTCCA CAAGTATGGG AACTACTTCT 720
TCCCGGGAAC GGGTGACATG TACGAGGTGG GGGCCGAGAG CGGACGCTAC TACTGCCTCA 780
ACGTCCCCCT GCGAGACGGC ATCGACGACC AGAGTTACCG GCAGCTGTTC CAGCCGGTCA 840
TCAAGCAGGT GGTGGATTAC TACCAGCCCA CCTGCATCGT CCTGCAGTGT GGGGCCGATT 900
CCCTGGGCTG CGACAGACTG GGCTGCTTCA ACCTTAGCAT ACGGGGACAC GGGGAGTGCG 960
TGGAGTTCGT GAAGAGTTTT AAGATTCCTC TGCTGGTGCT CGGAGGAGGA GGGTACACTG 1020
TGAGGAACGT GGCTCGCTGC TGGACCTATG AGACATCTCT GCTGCTGGAG GAATCCATCA 1080
GCGACGAGCT GCCGTACAGC GAATATTTCG AGTACTTTGC CCCAGACTTC ACGCTGCATC 1140
CTGATGTCAG CACCAGGATC GAAAACCAGA ACTCCAGACA GTATCTGGAA CAGATCCGTC 1200
AGACCGTGTT TGAAAACCTG AAGATGTTGA ACCACGCGCC CAGCGTCCAG ATCCACGACG 1260
TCCCGTCAGA CATGCTGAGC TACGAACGCA CAGACGACCC CGACCCAGAC GAGAGGGGAG 1320
CTGAGGAGAA CTACACCCGA CAAGAGGCAG CGAATGAATT CTACGACGGC GACCATGACA 1380
ACGACAAAGA GAGCGACGTT GAAATTTAA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0192 ENSONIP00000019932.1 Oreochromis niloticus 98 0.0 852
WERAM-Pof-0043 ENSPFOP00000003698.2 Poecilia formosa 98 0.0 850
WERAM-Xim-0005 ENSXMAP00000000863.1 Xiphophorus maculatus 98 0.0 849
WERAM-Leo-0119 ENSLOCP00000014828.1 Lepisosteus oculatus 97 0.0 842
WERAM-Ten-0120 ENSTNIP00000013021.1 Tetraodon nigroviridis 97 0.0 841
WERAM-Gaa-0203 ENSGACP00000024795.1 Gasterosteus aculeatus 97 0.0 838
WERAM-Dar-0082 ENSDARP00000054625.5 Danio rerio 96 0.0 837
WERAM-Gam-0015 ENSGMOP00000001496.1 Gadus morhua 95 0.0 829
WERAM-Meg-0022 ENSMGAP00000001598.1 Meleagris gallopavo 93 0.0 823
WERAM-Gaga-0024 ENSGALP00000004141.3 Gallus gallus 93 0.0 823
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 93 0.0 822
WERAM-Xet-0020 ENSXETP00000005840.3 Xenopus tropicalis 92 0.0 817
WERAM-Anc-0124 ENSACAP00000011701.2 Anolis carolinensis 92 0.0 816
WERAM-Sah-0124 ENSSHAP00000012846.1 Sarcophilus harrisii 92 0.0 813
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 92 0.0 812
WERAM-Tag-0179 ENSTGUP00000015405.1 Taeniopygia guttata 93 0.0 811
WERAM-Mum-0059 ENSMUSP00000037981.7 Mus musculus 92 0.0 810
WERAM-Sus-0109 ENSSSCP00000015310.2 Sus scrofa 92 0.0 810
WERAM-Poa-0142 ENSPPYP00000017772.1 Pongo abelii 92 0.0 810
WERAM-Paa-0044 ENSPANP00000001672.1 Papio anubis 92 0.0 810
WERAM-Pat-0142 ENSPTRP00000029652.3 Pan troglodytes 92 0.0 810
WERAM-Orc-0086 ENSOCUP00000007738.2 Oryctolagus cuniculus 92 0.0 810
WERAM-Ocp-0150 ENSOPRP00000015465.1 Ochotona princeps 92 0.0 810
WERAM-Myl-0096 ENSMLUP00000007910.2 Myotis lucifugus 92 0.0 810
WERAM-Ict-0140 ENSSTOP00000014542.2 Ictidomys tridecemlineatus 92 0.0 810
WERAM-Hos-0198 ENSP00000302967.3 Homo sapiens 92 0.0 810
WERAM-Gog-0182 ENSGGOP00000015976.2 Gorilla gorilla 92 0.0 810
WERAM-Cap-0155 ENSCPOP00000012861.2 Cavia porcellus 92 0.0 810
WERAM-Caf-0075 ENSCAFP00000030390.2 Canis familiaris 92 0.0 810
WERAM-Caj-0192 ENSCJAP00000033421.2 Callithrix jacchus 92 0.0 810
WERAM-Aim-0114 ENSAMEP00000011012.1 Ailuropoda melanoleuca 92 0.0 810
WERAM-Eqc-0167 ENSECAP00000018023.1 Equus caballus 91 0.0 808
WERAM-Mup-0085 ENSMPUP00000008127.1 Mustela putorius furo 91 0.0 806
WERAM-Ova-0007 ENSOARP00000000868.1 Ovis aries 91 0.0 803
WERAM-Mod-0086 ENSMODP00000013319.2 Monodelphis domestica 91 0.0 803
WERAM-Dan-0065 ENSDNOP00000006447.2 Dasypus novemcinctus 91 0.0 801
WERAM-Fec-0077 ENSFCAP00000006409.3 Felis catus 91 0.0 799
WERAM-Otg-0013 ENSOGAP00000000543.2 Otolemur garnettii 90 0.0 798
WERAM-Nol-0100 ENSNLEP00000011707.1 Nomascus leucogenys 90 0.0 791
WERAM-Fia-0044 ENSFALP00000003005.1 Ficedula albicollis 94 0.0 790
WERAM-Pes-0041 ENSPSIP00000006305.1 Pelodiscus sinensis 93 0.0 778
WERAM-Tut-0154 ENSTTRP00000013027.1 Tursiops truncatus 87 0.0 755
WERAM-Ran-0128 ENSRNOP00000071791.1 Rattus norvegicus 86 0.0 754
WERAM-Pem-0092 ENSPMAP00000009670.1 Petromyzon marinus 86 0.0 742
WERAM-Ptv-0171 ENSPVAP00000014750.1 Pteropus vampyrus 85 0.0 741
WERAM-Anp-0042 ENSAPLP00000004660.1 Anas platyrhynchos 94 0.0 736
WERAM-Mim-0152 ENSMICP00000015894.1 Microcebus murinus 85 0.0 734
WERAM-Tar-0077 ENSTRUP00000015206.1 Takifugu rubripes 92 0.0 718
WERAM-Chh-0070 ENSCHOP00000007333.1 Choloepus hoffmanni 92 0.0 714
WERAM-Mam-0105 ENSMMUP00000016525.1 Macaca mulatta 92 0.0 702
WERAM-Prc-0116 ENSPCAP00000010084.1 Procavia capensis 82 0.0 699
WERAM-Cii-0013 ENSCINP00000004801.3 Ciona intestinalis 73 0.0 664
WERAM-Loa-0085 ENSLAFP00000006680.3 Loxodonta africana 92 0.0 662
WERAM-Tas-0075 ENSTSYP00000007464.1 Tarsius syrichta 81 0.0 649
WERAM-Cis-0077 ENSCSAVP00000016740.1 Ciona savignyi 72 0.0 642
WERAM-Tub-0054 ENSTBEP00000006507.1 Tupaia belangeri 93 2e-180 629
WERAM-Drm-0025 FBpp0078414 Drosophila melanogaster 67 4e-172 601
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 64 8e-152 534
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 64 1e-149 526
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 62 5e-149 525
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 61 5e-148 521
WERAM-Coi-0024 EAS33504 Coccidioides immitis 63 7e-148 521
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 63 1e-147 520
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 62 2e-147 519
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 59 7e-147 517
WERAM-Kop-0004 CAY67954 Komagataella pastoris 58 1e-146 516
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 60 2e-146 516
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 65 2e-146 516
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 61 5e-146 514
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 60 2e-145 512
WERAM-Glm-0130 GLYMA11G19290.1 Glycine max 58 3e-145 512
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 58 4e-145 511
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 61 5e-145 511
WERAM-Met-0097 AES88434 Medicago truncatula 58 9e-145 510
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 60 1e-144 510
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 58 1e-144 510
WERAM-Org-0044 ORGLA04G0087200.1 Oryza glaberrima 58 1e-144 510
WERAM-Trv-0003 EHK19072 Trichoderma virens 58 2e-144 509
WERAM-Orni-0039 ONIVA04G09660.1 Oryza nivara 58 2e-144 509
WERAM-Ori-0051 BGIOSGA016344-PA Oryza indica 58 2e-144 509
WERAM-Orgl-0043 OGLUM04G11380.3 Oryza glumaepatula 58 2e-144 509
WERAM-Art-0082 AT3G44680.1 Arabidopsis thaliana 58 2e-144 509
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 60 2e-144 509
WERAM-Caa-0018 KGT69072 Candida albicans 56 2e-144 509
WERAM-Ved-0020 EGY15146 Verticillium dahliae 60 3e-144 508
WERAM-Orbr-0052 OB04G18820.1 Oryza brachyantha 58 4e-144 508
WERAM-Bro-0059 Bo3g120880.1 Brassica oleracea 57 1e-143 507
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 58 2e-143 506
WERAM-Mua-0089 GSMUA_Achr6P17260_001 Musa acuminata 57 2e-143 505
WERAM-Pot-0020 POPTR_0001s46430.1 Populus trichocarpa 58 3e-143 505
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 58 3e-143 505
WERAM-Brr-0098 Bra019424.1-P Brassica rapa 57 3e-143 505
WERAM-Orb-0042 OBART04G11700.1 Oryza barthii 58 4e-143 504
WERAM-Orr-0042 ORUFI04G12890.1 Oryza rufipogon 58 6e-143 504
WERAM-Cag-0003 CAG57932 Candida glabrata 58 6e-143 504
WERAM-Thc-0114 EOY33523 Theobroma cacao 57 9e-143 504
WERAM-Sob-0086 Sb06g015420.1 Sorghum bicolor 59 1e-142 503
WERAM-Trr-0017 EGR48353 Trichoderma reesei 56 1e-142 503
WERAM-Asg-0034 AAS54885 Ashbya gossypii 57 2e-142 503
WERAM-Amt-0048 ERN13133 Amborella trichopoda 57 5e-142 501
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 59 6e-142 501
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 56 1e-141 499
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 62 2e-141 499
WERAM-Sei-0035 Si010167m Setaria italica 60 2e-141 499
WERAM-Chr-0011 EDP01149 Chlamydomonas reinhardtii 57 2e-141 499
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 62 2e-141 499
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 60 3e-141 498
WERAM-Viv-0093 VIT_15s0021g00610.t01 Vitis vinifera 58 5e-141 498
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 63 5e-141 498
WERAM-Prp-0056 EMJ02177 Prunus persica 63 9e-141 497
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 56 1e-140 497
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 57 1e-140 496
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 61 1e-139 493
WERAM-Arl-0024 fgenesh1_pg.C_scaffold_5000937 Arabidopsis lyrata 55 2e-139 493
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 60 2e-139 493
WERAM-Zem-0071 GRMZM2G119703_P01 Zea mays 59 4e-139 491
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 54 1e-138 490
Created Date 25-Jun-2016