WERAM Information


Tag Content
WERAM ID WERAM-Gaga-0024
Ensembl Protein ID ENSGALP00000004141.3
Gene Name HDAC3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGALG00000002634.4 ENSGALT00000004150.4 ENSGALP00000004141.3
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 8.00e-170 564.1 4 389
Organism Gallus gallus
Domain Profile
  HDAC Class-I

           class-1.txt   2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90 
+vay+yd+dvg++hyg++hpmkp+rl+lth+Lvl+ygl+kk+ ++kp +as++++++fhse+yi+fl++v+p+n++ ++k+l+ fnvg+
ENSGALP00000004141.3 4 TVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGD 92
79*************************************************************************************** PP
class-1.txt 91 dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeaf 179
dcPvf glfe+c+ +tGasl++a++Ln+k +diainwaGGlhhakk easGfcyvnDiv++ilellk+h+rvlyidid+hhGDgv+eaf
ENSGALP00000004141.3 93 DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAF 181
***************************************************************************************** PP
class-1.txt 180 yttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefn 268
y tdrvmtvsfhkyg++ffPgtGd+++vgae+g+yy++nvPl+dgidD+sy+++f++vi++v++ ++P+++vlqcGaDsl +Drlg+fn
ENSGALP00000004141.3 182 YLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGCDRLGCFN 270
***************************************************************************************** PP
class-1.txt 269 lsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
lsi+gh+ecv++vksfn+pllvlGGGGYt+rnvaRcwtyet++++
ENSGALP00000004141.3 271 LSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLV 315
******************************************987 PP
class-1.txt 228 esyekifksviskv.ieafePeavvlqcGaDslagDr 263
+++ +i +++ +++ + + P++ + ++ +D l+ Dr
ENSGALP00000004141.3 353 QYLDQIRQTIFENLkMLNHAPSVQIHDVPSDLLSYDR 389
5678888899888735679999999999999999998 PP

Protein Sequence
(Fasta)
MAKTVAYFYD PDVGNFHYGA GHPMKPHRLA LTHSLVLHYG LYKKMIVFKP YQASQHDMCR 60
FHSEDYIDFL QRVSPNNMQG FTKSLNAFNV GDDCPVFPGL FEFCSRYTGA SLQGATQLNN 120
KICDIAINWA GGLHHAKKFE ASGFCYVNDI VIGILELLKY HPRVLYIDID IHHGDGVQEA 180
FYLTDRVMTV SFHKYGNYFF PGTGDMYEVG AESGRYYCLN VPLRDGIDDQ SYKHLFQPVI 240
NQVVDYYQPT CIVLQCGADS LGCDRLGCFN LSIRGHGECV EYVKSFNIPL LVLGGGGYTV 300
RNVARCWTYE TSLLVDEAIS EELPYSEYFE YFAPDFTLHP DVSTRIENQN SRQYLDQIRQ 360
TIFENLKMLN HAPSVQIHDV PSDLLSYDRT DEPDPEERGS EENYSRPEAA NEFYDGDHDN 420
DKESDVEI 428
Nucleotide Sequence
(Fasta)
CTCGCGAGAG CTGGCGCACA GACAAGGGCC GACGGGCGGT GCGGTCGCGA AGTGATGACG 60
TAAGGGGGGG CGCGGGGTGG CGGTGGCGGC CTGTTCGCCA TGGCGAAGAC CGTGGCCTAT 120
TTCTACGACC CGGACGTCGG CAATTTCCAC TACGGAGCCG GGCACCCCAT GAAGCCGCAC 180
CGCCTGGCGC TCACCCACAG CCTGGTGCTG CACTACGGCC TCTACAAGAA GATGATCGTT 240
TTCAAGCCAT ACCAGGCATC GCAGCATGAC ATGTGCAGAT TCCACTCCGA GGACTACATA 300
GACTTCCTGC AGAGAGTGAG TCCCAACAAC ATGCAGGGCT TCACCAAAAG CCTCAATGCT 360
TTCAACGTGG GCGATGACTG CCCAGTGTTT CCAGGGCTCT TTGAGTTTTG CTCTCGCTAC 420
ACTGGGGCCT CCCTGCAGGG AGCAACGCAG CTGAACAACA AGATCTGTGA TATTGCAATA 480
AACTGGGCAG GGGGCCTACA TCATGCCAAA AAGTTTGAGG CTTCTGGGTT TTGCTACGTC 540
AACGACATAG TAATTGGCAT CCTGGAGCTG CTCAAATACC ACCCACGTGT TCTGTATATT 600
GATATTGATA TCCATCACGG AGATGGTGTG CAGGAAGCTT TCTACTTGAC AGACCGTGTC 660
ATGACCGTGT CATTTCATAA ATATGGAAAC TATTTCTTTC CTGGTACAGG GGACATGTAT 720
GAAGTTGGTG CGGAGAGTGG TCGTTATTAC TGTCTCAACG TGCCTCTACG AGATGGTATC 780
GATGACCAAA GTTATAAACA CCTCTTCCAA CCAGTCATTA ACCAAGTGGT AGATTACTAT 840
CAGCCCACCT GCATCGTATT GCAGTGTGGT GCAGATTCTC TGGGTTGTGA CCGTTTGGGC 900
TGCTTTAACC TCAGTATAAG AGGACATGGG GAGTGCGTGG AGTACGTAAA GAGTTTCAAC 960
ATCCCCTTAC TGGTGCTGGG AGGAGGCGGG TACACAGTCC GCAATGTGGC ACGATGCTGG 1020
ACTTACGAAA CATCGTTGCT TGTAGATGAA GCAATTAGTG AAGAGCTCCC ATACAGCGAG 1080
TACTTTGAAT ACTTCGCTCC AGATTTCACT CTTCATCCTG ATGTCAGTAC GAGGATTGAA 1140
AATCAGAACT CCAGGCAGTA CTTGGATCAG ATCAGGCAGA CAATATTTGA GAACCTGAAG 1200
ATGCTGAACC ATGCTCCCAG CGTGCAGATC CACGATGTCC CTTCTGACTT GCTGAGCTAC 1260
GATCGCACAG ATGAACCTGA TCCAGAGGAA AGAGGCTCTG AGGAAAACTA CAGCAGGCCT 1320
GAAGCTGCCA ACGAGTTTTA TGATGGTGAC CACGATAACG ACAAAGAGAG TGACGTTGAG 1380
ATCTGAGGAA TCCGATGGAC TCTCTGGACT CTGGAGATCT GGGACTCTGG ACCATGGGGG 1440
GTGGTTCCCA TGTTGGACAT TGGTGCAGTT AACTGGGCTG CGTGGGAGCC AGTGAGCCCT 1500
CCCTTCATAT TCAACTGCAT GTGGTGGCAG CGGAAAACAG CACCACTGCA GATTTCTGCT 1560
CCCTGCAAGG CAGAGAGCAG TGAAACATGT TCCTTACTTT CCACCACGCA TCACGGTTCC 1620
ACCTGTCACC GCTCTGGGAA ATGGAAATTC AAGCAGAACT CAGACCCGTG CCATGGACTG 1680
GCTGGCAGCC ACGCAGCTGC CTTCTGAGCC CCACTCAGTC AGCTTCTTCA GCTCCCCTGC 1740
AGGCTTCTGC CAGAAAAAGG TGGGAGCTGA AGTGTCTGTG CCTACAACCT CTGCCTCATC 1800
AGCAGCACAC CTGCCACATC CCGCTGTCCC CAGCCCTCTG CTCAG 1846
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Meg-0022 ENSMGAP00000001598.1 Meleagris gallopavo 100 0.0 893
WERAM-Anc-0124 ENSACAP00000011701.2 Anolis carolinensis 98 0.0 882
WERAM-Sah-0124 ENSSHAP00000012846.1 Sarcophilus harrisii 98 0.0 879
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 98 0.0 877
WERAM-Tag-0179 ENSTGUP00000015405.1 Taeniopygia guttata 98 0.0 877
WERAM-Sus-0109 ENSSSCP00000015310.2 Sus scrofa 98 0.0 877
WERAM-Poa-0142 ENSPPYP00000017772.1 Pongo abelii 98 0.0 877
WERAM-Paa-0044 ENSPANP00000001672.1 Papio anubis 98 0.0 877
WERAM-Pat-0142 ENSPTRP00000029652.3 Pan troglodytes 98 0.0 877
WERAM-Orc-0086 ENSOCUP00000007738.2 Oryctolagus cuniculus 98 0.0 877
WERAM-Ocp-0150 ENSOPRP00000015465.1 Ochotona princeps 98 0.0 877
WERAM-Myl-0096 ENSMLUP00000007910.2 Myotis lucifugus 98 0.0 877
WERAM-Ict-0140 ENSSTOP00000014542.2 Ictidomys tridecemlineatus 98 0.0 877
WERAM-Hos-0198 ENSP00000302967.3 Homo sapiens 98 0.0 877
WERAM-Gog-0182 ENSGGOP00000015976.2 Gorilla gorilla 98 0.0 877
WERAM-Cap-0155 ENSCPOP00000012861.2 Cavia porcellus 98 0.0 877
WERAM-Caf-0075 ENSCAFP00000030390.2 Canis familiaris 98 0.0 877
WERAM-Caj-0192 ENSCJAP00000033421.2 Callithrix jacchus 98 0.0 877
WERAM-Aim-0114 ENSAMEP00000011012.1 Ailuropoda melanoleuca 98 0.0 877
WERAM-Mum-0059 ENSMUSP00000037981.7 Mus musculus 98 0.0 875
WERAM-Eqc-0167 ENSECAP00000018023.1 Equus caballus 97 0.0 874
WERAM-Xet-0020 ENSXETP00000005840.3 Xenopus tropicalis 96 0.0 872
WERAM-Mup-0085 ENSMPUP00000008127.1 Mustela putorius furo 97 0.0 872
WERAM-Ova-0007 ENSOARP00000000868.1 Ovis aries 97 0.0 870
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 96 0.0 869
WERAM-Dan-0065 ENSDNOP00000006447.2 Dasypus novemcinctus 97 0.0 868
WERAM-Fec-0077 ENSFCAP00000006409.3 Felis catus 97 0.0 867
WERAM-Mod-0086 ENSMODP00000013319.2 Monodelphis domestica 96 0.0 867
WERAM-Otg-0013 ENSOGAP00000000543.2 Otolemur garnettii 97 0.0 866
WERAM-Nol-0100 ENSNLEP00000011707.1 Nomascus leucogenys 96 0.0 858
WERAM-Orn-0192 ENSONIP00000019932.1 Oreochromis niloticus 94 0.0 854
WERAM-Fia-0044 ENSFALP00000003005.1 Ficedula albicollis 99 0.0 850
WERAM-Leo-0119 ENSLOCP00000014828.1 Lepisosteus oculatus 94 0.0 850
WERAM-Orla-0093 ENSORLP00000011294.1 Oryzias latipes 93 0.0 848
WERAM-Pof-0043 ENSPFOP00000003698.2 Poecilia formosa 93 0.0 848
WERAM-Xim-0005 ENSXMAP00000000863.1 Xiphophorus maculatus 93 0.0 847
WERAM-Dar-0082 ENSDARP00000054625.5 Danio rerio 93 0.0 847
WERAM-Pes-0041 ENSPSIP00000006305.1 Pelodiscus sinensis 99 0.0 839
WERAM-Gaa-0203 ENSGACP00000024795.1 Gasterosteus aculeatus 92 0.0 839
WERAM-Gam-0015 ENSGMOP00000001496.1 Gadus morhua 93 0.0 839
WERAM-Ten-0120 ENSTNIP00000013021.1 Tetraodon nigroviridis 92 0.0 838
WERAM-Tut-0154 ENSTTRP00000013027.1 Tursiops truncatus 92 0.0 817
WERAM-Ran-0128 ENSRNOP00000071791.1 Rattus norvegicus 91 0.0 815
WERAM-Ptv-0171 ENSPVAP00000014750.1 Pteropus vampyrus 91 0.0 806
WERAM-Mim-0152 ENSMICP00000015894.1 Microcebus murinus 91 0.0 801
WERAM-Anp-0042 ENSAPLP00000004660.1 Anas platyrhynchos 100 0.0 796
WERAM-Chh-0070 ENSCHOP00000007333.1 Choloepus hoffmanni 97 0.0 771
WERAM-Pem-0092 ENSPMAP00000009670.1 Petromyzon marinus 86 0.0 763
WERAM-Prc-0116 ENSPCAP00000010084.1 Procavia capensis 87 0.0 761
WERAM-Mam-0105 ENSMMUP00000016525.1 Macaca mulatta 98 0.0 757
WERAM-Loa-0085 ENSLAFP00000006680.3 Loxodonta africana 98 0.0 719
WERAM-Tar-0077 ENSTRUP00000015206.1 Takifugu rubripes 87 0.0 717
WERAM-Tas-0075 ENSTSYP00000007464.1 Tarsius syrichta 86 0.0 703
WERAM-Cii-0013 ENSCINP00000004801.3 Ciona intestinalis 74 0.0 686
WERAM-Tub-0054 ENSTBEP00000006507.1 Tupaia belangeri 98 0.0 681
WERAM-Cis-0077 ENSCSAVP00000016740.1 Ciona savignyi 73 0.0 667
WERAM-Drm-0025 FBpp0078414 Drosophila melanogaster 66 3e-177 618
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 63 2e-156 549
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 62 2e-155 546
WERAM-Coi-0024 EAS33504 Coccidioides immitis 63 2e-155 546
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 63 2e-154 542
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 63 3e-154 541
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 64 5e-154 541
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 61 6e-154 541
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 61 2e-153 539
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 61 4e-153 538
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 65 1e-152 536
WERAM-Dio-0123 ENSDORP00000011840.1 Dipodomys ordii 81 3e-152 535
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 60 4e-152 535
WERAM-Kop-0004 CAY67954 Komagataella pastoris 58 7e-152 534
WERAM-Caa-0018 KGT69072 Candida albicans 57 9e-152 533
WERAM-Glm-0130 GLYMA11G19290.1 Glycine max 59 3e-151 532
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 63 8e-151 530
WERAM-Asg-0034 AAS54885 Ashbya gossypii 59 1e-150 530
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 58 1e-150 530
WERAM-Ved-0020 EGY15146 Verticillium dahliae 62 1e-150 530
WERAM-Art-0082 AT3G44680.1 Arabidopsis thaliana 58 2e-150 529
WERAM-Met-0097 AES88434 Medicago truncatula 58 4e-150 528
WERAM-Cag-0003 CAG57932 Candida glabrata 60 5e-150 528
WERAM-Bro-0059 Bo3g120880.1 Brassica oleracea 58 8e-150 527
WERAM-Thc-0114 EOY33523 Theobroma cacao 58 2e-149 526
WERAM-Trv-0003 EHK19072 Trichoderma virens 57 2e-149 526
WERAM-Pot-0020 POPTR_0001s46430.1 Populus trichocarpa 58 2e-149 525
WERAM-Brr-0098 Bra019424.1-P Brassica rapa 58 3e-149 525
WERAM-Org-0044 ORGLA04G0087200.1 Oryza glaberrima 58 4e-149 525
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 60 4e-149 525
WERAM-Orni-0039 ONIVA04G09660.1 Oryza nivara 58 5e-149 524
WERAM-Ori-0051 BGIOSGA016344-PA Oryza indica 58 5e-149 524
WERAM-Orgl-0043 OGLUM04G11380.3 Oryza glumaepatula 58 5e-149 524
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 60 1e-148 523
WERAM-Orbr-0052 OB04G18820.1 Oryza brachyantha 58 2e-148 523
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 59 4e-148 521
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 60 5e-148 521
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 60 5e-148 521
WERAM-Amt-0048 ERN13133 Amborella trichopoda 58 9e-148 520
WERAM-Trr-0017 EGR48353 Trichoderma reesei 60 2e-147 519
WERAM-Orb-0042 OBART04G11700.1 Oryza barthii 58 2e-147 519
WERAM-Orr-0042 ORUFI04G12890.1 Oryza rufipogon 58 3e-147 518
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 59 4e-147 518
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 59 5e-147 518
WERAM-Mua-0089 GSMUA_Achr6P17260_001 Musa acuminata 57 6e-147 518
WERAM-Sob-0086 Sb06g015420.1 Sorghum bicolor 60 8e-147 517
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 57 1e-146 516
WERAM-Viv-0093 VIT_15s0021g00610.t01 Vitis vinifera 58 2e-146 516
WERAM-Arl-0024 fgenesh1_pg.C_scaffold_5000937 Arabidopsis lyrata 56 4e-146 515
WERAM-Chr-0011 EDP01149 Chlamydomonas reinhardtii 57 8e-146 514
WERAM-Sol-0138 Solyc11g067020.1.1 Solanum lycopersicum 58 9e-146 513
WERAM-Prp-0063 EMJ06433 Prunus persica 57 1e-145 513
WERAM-Sei-0035 Si010167m Setaria italica 60 2e-145 513
WERAM-Orp-0042 OPUNC04G09700.1 Oryza punctata 58 2e-145 513
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 57 4e-145 511
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 60 9e-145 510
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 54 2e-144 509
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 60 2e-144 509
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 56 3e-144 508
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 61 4e-144 508
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 60 8e-144 507
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 62 9e-144 507
WERAM-Zem-0071 GRMZM2G119703_P01 Zea mays 60 1e-143 506
WERAM-Soa-0041 ENSSARP00000003871.1 Sorex araneus 64 3e-143 505
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 59 5e-143 504
WERAM-Pytr-0033 EDU43668 Pyrenophora triticirepentis 59 1e-142 503
Created Date 25-Jun-2016