WERAM Information


Tag Content
WERAM ID WERAM-Anp-0042
Ensembl Protein ID ENSAPLP00000004660.1
Gene Name HDAC3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSAPLG00000005060.1 ENSAPLT00000005278.1 ENSAPLP00000004660.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.00e-149 497.1 1 343
Organism Anas platyrhynchos
Domain Profile
  HDAC Class-I

           class-1.txt  45 ivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhh 133
++kp +as++++++fhse+yi+fl++v+p+n++ ++k+l+ fnvg+dcPvf glfe+c+ +tGasl++a++Ln+k +diainwaGGlhh
ENSAPLP00000004660.1 1 VFKPYQASQHDMCRFHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHH 89
689************************************************************************************** PP
class-1.txt 134 akkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlk 222
akk easGfcyvnDiv++ilellk+h+rvlyidid+hhGDgv+eafy tdrvmtvsfhkyg++ffPgtGd+++vgae+g+yy++nvPl+
ENSAPLP00000004660.1 90 AKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLR 178
***************************************************************************************** PP
class-1.txt 223 dgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetav 311
dgidD+sy+++f++vi++v++ ++P+++vlqcGaDsl +Drlg+fnlsi+gh+ecv++vksfn+pllvlGGGGYt+rnvaRcwtyet++
ENSAPLP00000004660.1 179 DGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSL 267
****************************************************************************************9 PP
class-1.txt 312 vl 313
++
ENSAPLP00000004660.1 268 LV 269
87 PP
class-1.txt 228 esyekifksviskv.ieafePeavvlqcGaDslagDr 263
+++ +i +++ +++ + + P++ + ++ +D l+ Dr
ENSAPLP00000004660.1 307 QYLDQIRQTIFENLkMLNHAPSMQIHDVPSDLLSYDR 343
5677888888888735578999999999999999998 PP

Protein Sequence
(Fasta)
VFKPYQASQH DMCRFHSEDY IDFLQRVSPN NMQGFTKSLN AFNVGDDCPV FPGLFEFCSR 60
YTGASLQGAT QLNNKICDIA INWAGGLHHA KKFEASGFCY VNDIVIGILE LLKYHPRVLY 120
IDIDIHHGDG VQEAFYLTDR VMTVSFHKYG NYFFPGTGDM YEVGAESGRY YCLNVPLRDG 180
IDDQSYKHLF QPVINQVVDY YQPTCIVLQC GADSLGCDRL GCFNLSIRGH GECVEYVKSF 240
NIPLLVLGGG GYTVRNVARC WTYETSLLVD EAISEELPYS EYFEYFAPDF TLHPDVSTRI 300
ENQNSRQYLD QIRQTIFENL KMLNHAPSMQ IHDVPSDLLS YDRTDEPDPE ERGSEENYSR 360
PEAANEFYDG DHDNDKESDV EI 382
Nucleotide Sequence
(Fasta)
GTTTTCAAGC CGTACCAGGC ATCCCAGCAC GACATGTGCC GGTTCCACTC CGAGGACTAC 60
ATAGACTTCC TGCAGAGAGT GAGTCCCAAC AACATGCAGG GGTTCACCAA GAGCCTCAAC 120
GCCTTCAACG TGGGTGATGA CTGCCCAGTG TTTCCAGGTC TCTTTGAATT TTGCTCTCGC 180
TATACTGGAG CCTCCCTGCA GGGAGCAACG CAGCTGAACA ACAAGATCTG TGATATTGCG 240
ATAAACTGGG CAGGGGGCCT GCATCATGCC AAAAAGTTTG AGGCTTCTGG GTTTTGTTAC 300
GTCAATGACA TAGTTATTGG CATCCTGGAG CTGCTCAAAT ACCACCCACG TGTTCTGTAT 360
ATTGATATTG ATATCCATCA CGGAGATGGT GTGCAGGAGG CCTTCTACTT GACGGACCGT 420
GTCATGACTG TGTCGTTCCA TAAATACGGG AACTACTTCT TCCCTGGCAC AGGGGACATG 480
TATGAAGTTG GTGCAGAGAG CGGCCGTTAT TACTGTCTCA ACGTGCCGCT ACGAGATGGC 540
ATCGATGACC AAAGTTATAA ACACCTCTTC CAGCCAGTCA TTAACCAGGT GGTAGATTAC 600
TATCAGCCCA CCTGCATAGT GCTGCAGTGT GGTGCTGATT CTCTGGGTTG CGACCGTTTG 660
GGTTGTTTTA ACCTCAGTAT AAGAGGGCAT GGGGAATGTG TGGAGTATGT GAAGAGCTTC 720
AACATCCCCT TACTGGTACT GGGAGGAGGC GGTTACACAG TCCGCAATGT GGCACGGTGC 780
TGGACTTATG AAACATCGTT GCTTGTAGAT GAAGCAATTA GTGAAGAGCT CCCGTACAGT 840
GAGTACTTCG AATACTTCGC TCCAGACTTC ACCCTTCACC CTGATGTCAG TACGAGGATT 900
GAAAATCAGA ACTCAAGGCA GTACTTGGAT CAGATCAGGC AGACGATATT TGAGAATCTG 960
AAGATGTTGA ACCATGCTCC CAGCATGCAG ATCCACGATG TCCCTTCTGA CTTGCTCAGC 1020
TACGATCGCA CAGATGAGCC TGATCCAGAG GAAAGAGGCT CTGAGGAAAA CTACAGCAGG 1080
CCTGAAGCTG CCAACGAGTT TTATGATGGT GACCACGATA ACGACAAAGA GAGCGATGTC 1140
GAGATCTGAG GGCTCTGGTG TGGGACTCTG GACTGCGGGG GGGACCCACG TTGATGCTTG 1200
GTGCAGTTAA CTGGGCTGCA CAGGTGCCAG CGAGCCCTCC CTTTGTATTT GGTTGCAAGC 1260
GGTGGCAGCA GAAACAGCAC CACTGCAGAC TTCTGCTGTC TGCAAGGCAG AGAGCAGTGA 1320
AATGTGTTCC TTACTTTCCA CCACACGTCA CGGTTCCAAC TGTCACCGCT CGGGGAAATG 1380
GAAACTCAAG TAGTGCTCAG ATCTGTGCTG TGTGCCGGCT GGCAGCCATG CAGCTGCTGA 1440
GCCCGACCTG CACCGGCCCA GTCAGCTCCT GTAACTCCGT GTGGGCTTCT GCCAGAAGGT 1500
GGGAGCTGGA GCTTGTGCCT CAACCTCTGC CTCTCGTCAG CAACACACCT GCCGCATCCC 1560
AGTCTCCCCA GCCCTCTGCT CAGGTACCCA GTCAGTTGTC CTCTGAAGCC TACGCTGAGG 1620
CTTGCTTCCC GATCCCCTTT CTGACCATCT GATGCTCCAC AGCTCAAGGA AA 1673
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Meg-0022 ENSMGAP00000001598.1 Meleagris gallopavo 100 0.0 796
WERAM-Gaga-0024 ENSGALP00000004141.3 Gallus gallus 100 0.0 796
WERAM-Fia-0044 ENSFALP00000003005.1 Ficedula albicollis 99 0.0 791
WERAM-Pes-0041 ENSPSIP00000006305.1 Pelodiscus sinensis 99 0.0 791
WERAM-Tag-0179 ENSTGUP00000015405.1 Taeniopygia guttata 99 0.0 787
WERAM-Anc-0124 ENSACAP00000011701.2 Anolis carolinensis 98 0.0 784
WERAM-Sah-0124 ENSSHAP00000012846.1 Sarcophilus harrisii 97 0.0 781
WERAM-Nol-0100 ENSNLEP00000011707.1 Nomascus leucogenys 97 0.0 781
WERAM-Otg-0013 ENSOGAP00000000543.2 Otolemur garnettii 97 0.0 780
WERAM-Fec-0077 ENSFCAP00000006409.3 Felis catus 97 0.0 780
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 97 0.0 779
WERAM-Sus-0109 ENSSSCP00000015310.2 Sus scrofa 97 0.0 779
WERAM-Poa-0142 ENSPPYP00000017772.1 Pongo abelii 97 0.0 779
WERAM-Paa-0044 ENSPANP00000001672.1 Papio anubis 97 0.0 779
WERAM-Pat-0142 ENSPTRP00000029652.3 Pan troglodytes 97 0.0 779
WERAM-Orc-0086 ENSOCUP00000007738.2 Oryctolagus cuniculus 97 0.0 779
WERAM-Ocp-0150 ENSOPRP00000015465.1 Ochotona princeps 97 0.0 779
WERAM-Myl-0096 ENSMLUP00000007910.2 Myotis lucifugus 97 0.0 779
WERAM-Ict-0140 ENSSTOP00000014542.2 Ictidomys tridecemlineatus 97 0.0 779
WERAM-Hos-0198 ENSP00000302967.3 Homo sapiens 97 0.0 779
WERAM-Gog-0182 ENSGGOP00000015976.2 Gorilla gorilla 97 0.0 779
WERAM-Cap-0155 ENSCPOP00000012861.2 Cavia porcellus 97 0.0 779
WERAM-Caf-0075 ENSCAFP00000030390.2 Canis familiaris 97 0.0 779
WERAM-Caj-0192 ENSCJAP00000033421.2 Callithrix jacchus 97 0.0 779
WERAM-Aim-0114 ENSAMEP00000011012.1 Ailuropoda melanoleuca 97 0.0 779
WERAM-Mup-0085 ENSMPUP00000008127.1 Mustela putorius furo 97 0.0 778
WERAM-Ova-0007 ENSOARP00000000868.1 Ovis aries 97 0.0 778
WERAM-Mum-0059 ENSMUSP00000037981.7 Mus musculus 97 0.0 778
WERAM-Xet-0020 ENSXETP00000005840.3 Xenopus tropicalis 96 0.0 776
WERAM-Eqc-0167 ENSECAP00000018023.1 Equus caballus 97 0.0 776
WERAM-Dan-0065 ENSDNOP00000006447.2 Dasypus novemcinctus 97 0.0 775
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 95 0.0 771
WERAM-Mod-0086 ENSMODP00000013319.2 Monodelphis domestica 96 0.0 770
WERAM-Chh-0070 ENSCHOP00000007333.1 Choloepus hoffmanni 97 0.0 769
WERAM-Orn-0192 ENSONIP00000019932.1 Oreochromis niloticus 95 0.0 767
WERAM-Orla-0093 ENSORLP00000011294.1 Oryzias latipes 94 0.0 761
WERAM-Leo-0119 ENSLOCP00000014828.1 Lepisosteus oculatus 95 0.0 761
WERAM-Pof-0043 ENSPFOP00000003698.2 Poecilia formosa 93 0.0 760
WERAM-Xim-0005 ENSXMAP00000000863.1 Xiphophorus maculatus 93 0.0 759
WERAM-Dar-0082 ENSDARP00000054625.5 Danio rerio 94 0.0 758
WERAM-Ten-0120 ENSTNIP00000013021.1 Tetraodon nigroviridis 93 0.0 755
WERAM-Mam-0105 ENSMMUP00000016525.1 Macaca mulatta 97 0.0 755
WERAM-Gaa-0203 ENSGACP00000024795.1 Gasterosteus aculeatus 93 0.0 752
WERAM-Gam-0015 ENSGMOP00000001496.1 Gadus morhua 93 0.0 750
WERAM-Tut-0154 ENSTTRP00000013027.1 Tursiops truncatus 91 0.0 719
WERAM-Ran-0128 ENSRNOP00000071791.1 Rattus norvegicus 90 0.0 717
WERAM-Mim-0152 ENSMICP00000015894.1 Microcebus murinus 90 0.0 711
WERAM-Ptv-0171 ENSPVAP00000014750.1 Pteropus vampyrus 90 0.0 709
WERAM-Pem-0092 ENSPMAP00000009670.1 Petromyzon marinus 86 0.0 708
WERAM-Tub-0054 ENSTBEP00000006507.1 Tupaia belangeri 97 0.0 679
WERAM-Tas-0075 ENSTSYP00000007464.1 Tarsius syrichta 97 0.0 677
WERAM-Prc-0116 ENSPCAP00000010084.1 Procavia capensis 86 0.0 663
WERAM-Tar-0077 ENSTRUP00000015206.1 Takifugu rubripes 86 0.0 632
WERAM-Loa-0085 ENSLAFP00000006680.3 Loxodonta africana 97 8e-179 623
WERAM-Cii-0013 ENSCINP00000004801.3 Ciona intestinalis 74 5e-176 614
WERAM-Cis-0077 ENSCSAVP00000016740.1 Ciona savignyi 72 5e-170 594
WERAM-Drm-0025 FBpp0078414 Drosophila melanogaster 65 3e-155 545
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 63 9e-137 484
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 63 2e-136 483
WERAM-Coi-0024 EAS33504 Coccidioides immitis 61 3e-134 475
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 60 7e-134 474
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 62 1e-133 473
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 61 2e-133 473
WERAM-Art-0082 AT3G44680.1 Arabidopsis thaliana 58 4e-133 471
WERAM-Glm-0130 GLYMA11G19290.1 Glycine max 58 4e-133 471
WERAM-Met-0097 AES88434 Medicago truncatula 57 6e-133 471
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 60 8e-133 471
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 65 1e-132 470
WERAM-Bro-0059 Bo3g120880.1 Brassica oleracea 58 2e-132 469
WERAM-Brr-0098 Bra019424.1-P Brassica rapa 58 4e-132 468
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 60 6e-132 468
WERAM-Pot-0020 POPTR_0001s46430.1 Populus trichocarpa 57 7e-132 467
WERAM-Thc-0114 EOY33523 Theobroma cacao 57 8e-132 467
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 59 1e-131 467
WERAM-Sem-0137 EFJ33452 Selaginella moellendorffii 58 1e-131 466
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 55 1e-131 466
WERAM-Arl-0024 fgenesh1_pg.C_scaffold_5000937 Arabidopsis lyrata 55 2e-131 466
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 61 2e-131 466
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 59 2e-131 466
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 59 3e-131 465
WERAM-Org-0044 ORGLA04G0087200.1 Oryza glaberrima 57 4e-131 465
WERAM-Orni-0039 ONIVA04G09660.1 Oryza nivara 57 5e-131 464
WERAM-Ori-0051 BGIOSGA016344-PA Oryza indica 57 5e-131 464
WERAM-Orgl-0043 OGLUM04G11380.3 Oryza glumaepatula 57 5e-131 464
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 59 6e-131 464
WERAM-Orbr-0052 OB04G18820.1 Oryza brachyantha 57 1e-130 463
WERAM-Amt-0048 ERN13133 Amborella trichopoda 57 1e-130 463
WERAM-Caa-0018 KGT69072 Candida albicans 61 3e-130 462
WERAM-Kop-0004 CAY67954 Komagataella pastoris 56 5e-130 461
WERAM-Ved-0020 EGY15146 Verticillium dahliae 61 7e-130 461
WERAM-Php-0035 PP1S180_68V6.1 Physcomitrella patens 60 1e-129 460
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 60 1e-129 460
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 56 1e-129 459
WERAM-Orb-0042 OBART04G11700.1 Oryza barthii 57 2e-129 459
WERAM-Orr-0042 ORUFI04G12890.1 Oryza rufipogon 57 3e-129 459
WERAM-Viv-0093 VIT_15s0021g00610.t01 Vitis vinifera 57 3e-129 459
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 59 3e-129 458
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 59 5e-129 458
WERAM-Trv-0003 EHK19072 Trichoderma virens 61 6e-129 457
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 59 1e-128 457
WERAM-Zem-0071 GRMZM2G119703_P01 Zea mays 59 1e-128 456
WERAM-Asg-0034 AAS54885 Ashbya gossypii 58 1e-128 456
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 59 1e-128 456
WERAM-Chr-0011 EDP01149 Chlamydomonas reinhardtii 56 2e-128 456
WERAM-Sob-0086 Sb06g015420.1 Sorghum bicolor 59 2e-128 456
WERAM-Sol-0138 Solyc11g067020.1.1 Solanum lycopersicum 57 2e-128 456
WERAM-Prp-0063 EMJ06433 Prunus persica 56 3e-128 455
WERAM-Cag-0003 CAG57932 Candida glabrata 58 9e-128 454
WERAM-Mua-0089 GSMUA_Achr6P17260_001 Musa acuminata 55 1e-127 453
WERAM-Orp-0042 OPUNC04G09700.1 Oryza punctata 56 2e-127 453
WERAM-Trr-0017 EGR48353 Trichoderma reesei 59 4e-127 451
WERAM-Sei-0035 Si010167m Setaria italica 59 4e-127 451
WERAM-Tru-0028 TRIUR3_16261-P1 Triticum urartu 59 5e-127 451
WERAM-Aet-0101 EMT12816 Aegilops tauschii 59 1e-126 449
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 61 1e-126 449
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 54 2e-126 449
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 63 5e-126 448
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 57 6e-126 447
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 60 9e-126 447
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 61 1e-125 447
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 61 2e-125 446
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 55 5e-125 444
WERAM-Nec-0007 EFNCRP00000000997 Neurospora crassa 63 1e-124 443
WERAM-Scj-0027 EEB08472 Schizosaccharomyces japonicus 59 3e-124 442
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 62 4e-124 441
Created Date 25-Jun-2016