WERAM Information

Tag Content
WERAM ID WERAM-Loa-0085
Ensembl Protein ID ENSLAFP00000006680.3
Gene Name HDAC3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLAFG00000007960.3 ENSLAFT00000007963.3 ENSLAFP00000006680.3
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.80e-162 540.5 4 311
Organism Loxodonta africana
Domain Profile
  HDAC Class-I
           class-1.txt   2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90 
                           +vay+yd+dvg++hyg++hpmkp+rl+lth+Lvl+ygl+kk+ ++kp +as++++++fhse+yi+fl++v+p+n++ ++k+l+ fnvg+
  ENSLAFP00000006680.3   4 TVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGD 92 
                           79*************************************************************************************** PP
           class-1.txt  91 dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeaf 179
                           dcPvf glfe+c+ +tGasl++a++Ln+k +diainwaGGlhhakk easGfcyvnDiv++ilellk+h+rvlyidid+hhGDgv+eaf
  ENSLAFP00000006680.3  93 DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAF 181
                           ***************************************************************************************** PP
           class-1.txt 180 yttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefn 268
                           y tdrv     hkyg++ffPgtGd+++vgae+g+yy++nvPl+dgidD+sy+++f++vi++v+++++P+++vlqcGaDsl +Drlg+fn
  ENSLAFP00000006680.3 182 YLTDRVK----HKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFN 266
                           ******7....****************************************************************************** PP
           class-1.txt 269 lsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                           lsi+gh+ecv++vksfn+pllvlGGGGYt+rnvaRcwtyet++++
  ENSLAFP00000006680.3 267 LSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLV 311
                           ******************************************986 PP
Protein Sequence
(Fasta)		MAKTVAYFYD PDVGNFHYGA GHPMKPHRLA LTHSLVLHYG LYKKMIVFKP YQASQHDMCR 60
FHSEDYIDFL QRVSPTNMQG FTKSLNAFNV GDDCPVFPGL FEFCSRYTGA SLQGATQLNN 120
KICDIAINWA GGLHHAKKFE ASGFCYVNDI VIGILELLKY HPRVLYIDID IHHGDGVQEA 180
FYLTDRVKHK YGNYFFPGTG DMYEVGAESG RYYCLNVPLR DGIDDQSYKH LFQPVINQVV 240
DFYQPTCIVL QCGADSLGCD RLGCFNLSIR GHGECVEYVK SFNIPLLVLG GGGYTVRNVA 300
RCWTYETSLL VEEAISEELP YSEYFEYFAP DFTLHPDVST RIENQNSRQ 349
Nucleotide Sequence
(Fasta)		ATGGCCAAGA CCGTGGCCTA TTTCTACGAC CCGGACGTGG GCAACTTCCA CTATGGGGCT 60
GGACATCCTA TGAAGCCTCA TCGCCTGGCA TTGACCCATA GTCTGGTTCT GCACTACGGT 120
CTCTATAAGA AGATGATCGT TTTCAAGCCA TACCAGGCTT CCCAGCACGA CATGTGCCGC 180
TTCCACTCCG AGGACTACAT CGACTTCCTG CAGAGAGTCA GCCCCACCAA TATGCAAGGC 240
TTCACCAAGA GCCTTAATGC CTTCAATGTG GGTGATGACT GCCCAGTGTT TCCCGGGCTC 300
TTTGAGTTCT GCTCCCGTTA CACAGGCGCA TCTCTGCAAG GAGCAACCCA ACTGAACAAC 360
AAGATCTGTG ATATTGCCAT TAACTGGGCT GGTGGTCTAC ATCATGCCAA GAAGTTTGAG 420
GCCTCGGGCT TCTGCTATGT CAACGACATT GTAATTGGGA TTCTGGAACT GCTCAAGTAC 480
CACCCTCGGG TGCTCTACAT TGATATTGAC ATCCACCATG GAGATGGAGT TCAGGAAGCC 540
TTCTACCTCA CTGACCGGGT CAAACACAAA TACGGAAATT ACTTCTTCCC CGGTACAGGT 600
GACATGTATG AAGTTGGGGC AGAAAGCGGT CGCTACTACT GTCTCAATGT GCCCCTGCGG 660
GATGGCATCG ATGACCAGAG TTACAAGCAT CTTTTCCAGC CGGTTATCAA CCAAGTAGTG 720
GACTTCTACC AACCCACGTG CATTGTGCTC CAGTGTGGAG CTGACTCTCT GGGCTGTGAT 780
CGATTGGGCT GCTTTAACCT TAGCATCCGA GGACATGGGG AATGTGTTGA ATATGTCAAG 840
AGCTTCAATA TCCCTCTACT GGTGCTAGGT GGTGGTGGCT ATACTGTGCG AAATGTTGCG 900
CGCTGCTGGA CTTACGAGAC ATCACTGCTG GTAGAGGAAG CCATTAGTGA GGAGCTTCCC 960
TATAGTGAAT ACTTCGAGTA CTTTGCCCCA GACTTTACAC TCCATCCGGA CGTCAGCACT 1020
CGCATCGAGA ATCAGAACTC ACGCCAG 1048
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sah-0124 ENSSHAP00000012846.1 Sarcophilus harrisii 99 0.0 724
WERAM-Sus-0109 ENSSSCP00000015310.2 Sus scrofa 99 0.0 724
WERAM-Poa-0142 ENSPPYP00000017772.1 Pongo abelii 99 0.0 724
WERAM-Paa-0044 ENSPANP00000001672.1 Papio anubis 99 0.0 724
WERAM-Pat-0142 ENSPTRP00000029652.3 Pan troglodytes 99 0.0 724
WERAM-Orc-0086 ENSOCUP00000007738.2 Oryctolagus cuniculus 99 0.0 724
WERAM-Ocp-0150 ENSOPRP00000015465.1 Ochotona princeps 99 0.0 724
WERAM-Myl-0096 ENSMLUP00000007910.2 Myotis lucifugus 99 0.0 724
WERAM-Ict-0140 ENSSTOP00000014542.2 Ictidomys tridecemlineatus 99 0.0 724
WERAM-Hos-0198 ENSP00000302967.3 Homo sapiens 99 0.0 724
WERAM-Gog-0182 ENSGGOP00000015976.2 Gorilla gorilla 99 0.0 724
WERAM-Cap-0155 ENSCPOP00000012861.2 Cavia porcellus 99 0.0 724
WERAM-Caf-0075 ENSCAFP00000030390.2 Canis familiaris 99 0.0 724
WERAM-Caj-0192 ENSCJAP00000033421.2 Callithrix jacchus 99 0.0 724
WERAM-Aim-0114 ENSAMEP00000011012.1 Ailuropoda melanoleuca 99 0.0 724
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 99 0.0 723
WERAM-Mum-0059 ENSMUSP00000037981.7 Mus musculus 98 0.0 722
WERAM-Eqc-0167 ENSECAP00000018023.1 Equus caballus 98 0.0 721
WERAM-Meg-0022 ENSMGAP00000001598.1 Meleagris gallopavo 98 0.0 719
WERAM-Gaga-0024 ENSGALP00000004141.3 Gallus gallus 98 0.0 719
WERAM-Ova-0007 ENSOARP00000000868.1 Ovis aries 98 0.0 719
WERAM-Dan-0065 ENSDNOP00000006447.2 Dasypus novemcinctus 98 0.0 719
WERAM-Mup-0085 ENSMPUP00000008127.1 Mustela putorius furo 98 0.0 719
WERAM-Anc-0124 ENSACAP00000011701.2 Anolis carolinensis 97 0.0 717
WERAM-Fec-0077 ENSFCAP00000006409.3 Felis catus 97 0.0 714
WERAM-Otg-0013 ENSOGAP00000000543.2 Otolemur garnettii 97 0.0 713
WERAM-Mod-0086 ENSMODP00000013319.2 Monodelphis domestica 97 0.0 712
WERAM-Xet-0020 ENSXETP00000005840.3 Xenopus tropicalis 96 0.0 711
WERAM-Tag-0179 ENSTGUP00000015405.1 Taeniopygia guttata 96 0.0 707
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 95 0.0 707
WERAM-Nol-0100 ENSNLEP00000011707.1 Nomascus leucogenys 97 0.0 704
WERAM-Leo-0119 ENSLOCP00000014828.1 Lepisosteus oculatus 93 0.0 693
WERAM-Orla-0093 ENSORLP00000011294.1 Oryzias latipes 92 0.0 689
WERAM-Dar-0082 ENSDARP00000054625.5 Danio rerio 93 0.0 689
WERAM-Orn-0192 ENSONIP00000019932.1 Oreochromis niloticus 92 0.0 689
WERAM-Xim-0005 ENSXMAP00000000863.1 Xiphophorus maculatus 92 0.0 688
WERAM-Pof-0043 ENSPFOP00000003698.2 Poecilia formosa 92 0.0 688
WERAM-Gam-0015 ENSGMOP00000001496.1 Gadus morhua 92 0.0 684
WERAM-Ten-0120 ENSTNIP00000013021.1 Tetraodon nigroviridis 92 0.0 680
WERAM-Fia-0044 ENSFALP00000003005.1 Ficedula albicollis 97 0.0 678
WERAM-Gaa-0203 ENSGACP00000024795.1 Gasterosteus aculeatus 91 0.0 678
WERAM-Pes-0041 ENSPSIP00000006305.1 Pelodiscus sinensis 97 0.0 670
WERAM-Tut-0154 ENSTTRP00000013027.1 Tursiops truncatus 92 0.0 662
WERAM-Ran-0128 ENSRNOP00000071791.1 Rattus norvegicus 90 0.0 658
WERAM-Ptv-0171 ENSPVAP00000014750.1 Pteropus vampyrus 91 0.0 654
WERAM-Mim-0152 ENSMICP00000015894.1 Microcebus murinus 90 0.0 647
WERAM-Pem-0092 ENSPMAP00000009670.1 Petromyzon marinus 88 0.0 631
WERAM-Anp-0042 ENSAPLP00000004660.1 Anas platyrhynchos 97 7e-179 623
WERAM-Tar-0077 ENSTRUP00000015206.1 Takifugu rubripes 87 9e-178 619
WERAM-Chh-0070 ENSCHOP00000007333.1 Choloepus hoffmanni 98 2e-177 619
WERAM-Prc-0116 ENSPCAP00000010084.1 Procavia capensis 85 7e-174 607
WERAM-Mam-0105 ENSMMUP00000016525.1 Macaca mulatta 98 3e-173 605
WERAM-Cii-0013 ENSCINP00000004801.3 Ciona intestinalis 77 8e-169 590
WERAM-Cis-0077 ENSCSAVP00000016740.1 Ciona savignyi 76 1e-166 582
WERAM-Drm-0025 FBpp0078414 Drosophila melanogaster 70 2e-156 549
WERAM-Tas-0075 ENSTSYP00000007464.1 Tarsius syrichta 83 3e-156 548
WERAM-Tub-0054 ENSTBEP00000006507.1 Tupaia belangeri 98 2e-149 525
WERAM-Dio-0123 ENSDORP00000011840.1 Dipodomys ordii 80 7e-148 520
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 62 6e-139 491
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 62 6e-138 487
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 61 1e-137 486
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 63 4e-137 484
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 61 4e-137 484
WERAM-Caa-0018 KGT69072 Candida albicans 62 4e-137 484
WERAM-Coi-0024 EAS33504 Coccidioides immitis 63 5e-137 484
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 63 1e-136 483
WERAM-Ved-0020 EGY15146 Verticillium dahliae 62 2e-136 482
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 61 2e-136 482
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 61 3e-136 482
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 61 3e-136 481
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 62 9e-136 480
WERAM-Soa-0041 ENSSARP00000003871.1 Sorex araneus 72 1e-135 479
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 63 2e-135 479
WERAM-Asg-0034 AAS54885 Ashbya gossypii 64 3e-135 478
WERAM-Kop-0004 CAY67954 Komagataella pastoris 62 4e-135 478
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 64 7e-135 477
WERAM-Cag-0003 CAG57932 Candida glabrata 63 1e-134 476
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 63 1e-134 476
WERAM-Trv-0003 EHK19072 Trichoderma virens 61 2e-134 475
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 61 4e-133 471
WERAM-Trr-0017 EGR48353 Trichoderma reesei 61 5e-133 471
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 61 8e-133 470
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 61 1e-132 470
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 61 1e-132 469
WERAM-Pytr-0033 EDU43668 Pyrenophora triticirepentis 61 2e-132 469
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 62 2e-132 469
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 62 3e-132 468
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 60 9e-132 467
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 60 3e-131 465
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 60 3e-131 465
WERAM-Bro-0059 Bo3g120880.1 Brassica oleracea 60 5e-131 464
WERAM-Art-0082 AT3G44680.1 Arabidopsis thaliana 61 9e-131 463
WERAM-Brr-0098 Bra019424.1-P Brassica rapa 61 1e-130 463
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 60 1e-130 463
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 59 2e-130 462
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 60 2e-130 462
WERAM-Glm-0130 GLYMA11G19290.1 Glycine max 61 2e-130 462
WERAM-Sob-0086 Sb06g015420.1 Sorghum bicolor 61 3e-130 462
WERAM-Met-0097 AES88434 Medicago truncatula 61 4e-130 461
WERAM-Chr-0011 EDP01149 Chlamydomonas reinhardtii 58 4e-130 461
WERAM-Amt-0016 ERM94967 Amborella trichopoda 61 5e-130 461
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 62 1e-129 459
WERAM-Thc-0026 EOX98961 Theobroma cacao 61 2e-129 459
WERAM-Prp-0056 EMJ02177 Prunus persica 62 2e-129 459
WERAM-Orp-0042 OPUNC04G09700.1 Oryza punctata 60 2e-129 459
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 62 2e-129 459
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 63 2e-129 459
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 63 3e-129 458
WERAM-Org-0044 ORGLA04G0087200.1 Oryza glaberrima 61 4e-129 458
WERAM-Sei-0035 Si010167m Setaria italica 60 5e-129 457
WERAM-Orni-0039 ONIVA04G09660.1 Oryza nivara 60 5e-129 457
WERAM-Ori-0051 BGIOSGA016344-PA Oryza indica 60 5e-129 457
WERAM-Orgl-0043 OGLUM04G11380.3 Oryza glumaepatula 60 5e-129 457
WERAM-Pot-0051 POPTR_0004s21950.1 Populus trichocarpa 60 7e-129 457
WERAM-Mua-0089 GSMUA_Achr6P17260_001 Musa acuminata 59 1e-128 456
WERAM-Orbr-0052 OB04G18820.1 Oryza brachyantha 60 2e-128 456
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 62 2e-128 456
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 62 2e-128 456
WERAM-Viv-0012 VIT_03s0038g04240.t01 Vitis vinifera 61 2e-128 456
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 59 2e-128 455
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 62 3e-128 455
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 61 7e-128 454
Created Date 25-Jun-2016