| Tag |
Content |
| WERAM ID |
WERAM-Leo-0119 |
| Ensembl Protein ID |
ENSLOCP00000014828.1 |
| Gene Name |
hdac3 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
5.20e-169 |
561.9 |
4 |
390 |
|
| Organism |
Lepisosteus oculatus |
| Domain Profile |
HDAC Class-I
class-1.txt 2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90
+ ay+yd+dvg++hyg++hpmkp+rlslth+Lvl+ygl+kk+ ++kp kas++++++fhse+yi+fl+kv+p+n++ ++k+l+ fnvg+
ENSLOCP00000014828.1 4 RTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGD 92
679************************************************************************************** PP
class-1.txt 91 dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeaf 179
dcPvf glfe+c+ +tGasl++a++Ln+k +diainwaGGlhhakk easGfcyvnDiv++ilellk+h+rvlyidid+hhGDgv+eaf
ENSLOCP00000014828.1 93 DCPVFPGLFEFCSRYTGASLQGATQLNHKICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAF 181
***************************************************************************************** PP
class-1.txt 180 yttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefn 268
y tdrvmtvsfhkyg++ffPgtGd+++vgae+g+yy++nvPl+dgidD+sy+++f++vi++v+++++P+++vlqcGaDsl +Drlg+fn
ENSLOCP00000014828.1 182 YLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGCDRLGCFN 270
***************************************************************************************** PP
class-1.txt 269 lsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
lsi+gh+ecv+fvksf++pllvlGGGGYt+rnvaRcwtyet++++
ENSLOCP00000014828.1 271 LSIRGHGECVEFVKSFKIPLLVLGGGGYTVRNVARCWTYETSLLV 315
******************************************986 PP
class-1.txt 227 Desyekifksviskv.ieafePeavvlqcGaDslagDr 263
+++e+i ++v +++ + + P++ + ++ +D l+ +r
ENSLOCP00000014828.1 353 QQYLEQIRQTVFENLkMLNHAPSVQIHDVPSDLLSYER 390
56778888888888735578888888888888887766 PP
|
Protein Sequence
(Fasta) | MTNRTAYFYD PDVGNFHYGA GHPMKPHRLS LTHSLVLHYG LYKKMMVFKP YKASQHDMCR 60
FHSEDYIDFL QKVSPNNMQG FTKSLNTFNV GDDCPVFPGL FEFCSRYTGA SLQGATQLNH 120
KICDIAINWA GGLHHAKKFE ASGFCYVNDI VISILELLKY HPRVLYIDID IHHGDGVQEA 180
FYLTDRVMTV SFHKYGNYFF PGTGDMYEVG AESGRYYCLN VPLRDGIDDQ SYRQLFQPVI 240
KQVVDFYQPT CIVLQCGADS LGCDRLGCFN LSIRGHGECV EFVKSFKIPL LVLGGGGYTV 300
RNVARCWTYE TSLLVEESIS DELPYSEYFE YFAPDFTLHP DVSTRIENQN SRQQYLEQIR 360
QTVFENLKML NHAPSVQIHD VPSDLLSYER TDEGDPDERG SEENYSRPEA ANEFYDGDHD 420
NDKESDVEI 429Protein Fasta Sequence
>ENSLOCP00000014828.1|Class-I|Lepisosteus oculatus
MTNRTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNHKICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFKIPLLVLGGGGYTVRNVARCWTYETSLLVEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQQYLEQIRQTVFENLKMLNHAPSVQIHDVPSDLLSYERTDEGDPDERGSEENYSRPEAANEFYDGDHDNDKESDVEI |
Nucleotide Sequence
(Fasta) | TGCTTTTTGA TATCCAGATT TTGATTTCAA TATGTTTTAA CACGCGGATA TCAATATTTG 60
ATATATCAAA TATTGACATA TTGACGCGCA ACGATAAAAA CGGAATTTCT CATGAAAAAA 120
ATAAAATACC GATAAGAATA CGATTTGAAA TATTTCCGAT ATCAGAAATT ATTTTTATTC 180
TATATTCGGT AATCGAGGCA AAGATGTTTA AACGCTTAAT CGCAATTTTA AACATGAATA 240
GAAATGAAAG TTCCTTAATA CGAGACCCCG CCACTTTCGA CGTCTACGTC ACATAAACAT 300
ACGTACGCAT GTTCGTGACG TAGTACACCA TCTGCTGTTT CTGATGACGT CCCGCACAGG 360
TCTCCCGTGT TTTACTATGG CGGCGATTTG GTAAATTAAA AAGAAAGCTG AATTAGAGTG 420
AATTAGAAAT CCTGCTTGAA AATTAAGTAC AAAAAAGAAG GACTGCCTTC ACTGCTGTCT 480
GGACGACACT CTCTGTTCGT TTTCCGCTGT GATGACGAAC AGGACGGCGT ATTTTTACGA 540
CCCAGACGTG GGGAACTTTC ATTACGGTGC TGGACACCCA ATGAAACCCC ATCGACTCTC 600
TCTCACCCAC AGTCTTGTTC TGCACTATGG GCTCTACAAG AAGATGATGG TGTTCAAGCC 660
ATACAAAGCC TCCCAACATG ACATGTGCCG CTTTCACTCG GAAGATTACA TCGACTTCCT 720
GCAAAAGGTC AGTCCCAACA ACATGCAGGG CTTCACCAAA AGTCTCAACA CCTTCAACGT 780
TGGGGATGAC TGTCCTGTGT TTCCTGGCCT GTTTGAGTTC TGCTCACGCT ACACGGGAGC 840
CTCTCTGCAG GGAGCAACGC AGCTAAACCA CAAGATCTGT GATATCGCCA TCAACTGGGC 900
TGGAGGCCTG CACCATGCCA AAAAATTTGA GGCGTCTGGA TTTTGCTACG TGAATGACAT 960
TGTCATCAGC ATTCTGGAGC TGCTAAAGTA CCATCCTCGC GTGCTCTACA TTGACATCGA 1020
CATTCACCAT GGCGACGGCG TGCAGGAGGC CTTTTACCTC ACCGACCGGG TCATGACCGT 1080
ATCCTTCCAC AAGTACGGGA ACTACTTTTT TCCCGGGACA GGAGACATGT ATGAAGTGGG 1140
AGCCGAAAGT GGGCGATATT ACTGCTTGAA CGTCCCCCTC CGAGATGGGA TTGATGACCA 1200
GAGCTACAGG CAGTTGTTCC AGCCGGTCAT CAAGCAGGTG GTGGACTTTT ATCAGCCAAC 1260
CTGTATTGTT CTTCAGTGTG GGGCTGACTC TCTGGGCTGT GATAGACTGG GCTGTTTTAA 1320
CCTCAGCATA AGAGGTCACG GGGAGTGTGT GGAGTTCGTG AAGAGCTTCA AAATCCCGCT 1380
GCTGGTCCTG GGCGGCGGAG GATACACGGT CCGCAACGTG GCGCGCTGCT GGACCTATGA 1440
GACTTCCCTG TTAGTCGAGG AGTCGATCAG TGATGAACTG CCTTACAGCG AGTACTTTGA 1500
ATATTTTGCT CCTGATTTCA CGTTGCACCC AGATGTCAGC ACCAGGATAG AAAACCAGAA 1560
CTCCAGACAG CAGTACCTGG AGCAGATCCG GCAGACGGTA TTCGAGAACC TGAAGATGCT 1620
GAACCACGCG CCCAGCGTGC AGATCCACGA CGTGCCCTCG GACCTGCTGA GCTACGAGCG 1680
GACCGACGAG GGAGACCCTG ACGAGAGAGG CTCTGAGGAG AACTATTCAC GGCCAGAAGC 1740
AGCCAATGAA TTCTATGATG GTGACCATGA CAACGACAAA GAAAGCGACG TTGAAATCTG 1800
A
1802Nucleotide Fasta Sequence
>ENSLOCP00000014828.1|Class-I|Lepisosteus oculatus
TGCTTTTTGATATCCAGATTTTGATTTCAATATGTTTTAACACGCGGATATCAATATTTGATATATCAAATATTGACATATTGACGCGCAACGATAAAAACGGAATTTCTCATGAAAAAAATAAAATACCGATAAGAATACGATTTGAAATATTTCCGATATCAGAAATTATTTTTATTCTATATTCGGTAATCGAGGCAAAGATGTTTAAACGCTTAATCGCAATTTTAAACATGAATAGAAATGAAAGTTCCTTAATACGAGACCCCGCCACTTTCGACGTCTACGTCACATAAACATACGTACGCATGTTCGTGACGTAGTACACCATCTGCTGTTTCTGATGACGTCCCGCACAGGTCTCCCGTGTTTTACTATGGCGGCGATTTGGTAAATTAAAAAGAAAGCTGAATTAGAGTGAATTAGAAATCCTGCTTGAAAATTAAGTACAAAAAAGAAGGACTGCCTTCACTGCTGTCTGGACGACACTCTCTGTTCGTTTTCCGCTGTGATGACGAACAGGACGGCGTATTTTTACGACCCAGACGTGGGGAACTTTCATTACGGTGCTGGACACCCAATGAAACCCCATCGACTCTCTCTCACCCACAGTCTTGTTCTGCACTATGGGCTCTACAAGAAGATGATGGTGTTCAAGCCATACAAAGCCTCCCAACATGACATGTGCCGCTTTCACTCGGAAGATTACATCGACTTCCTGCAAAAGGTCAGTCCCAACAACATGCAGGGCTTCACCAAAAGTCTCAACACCTTCAACGTTGGGGATGACTGTCCTGTGTTTCCTGGCCTGTTTGAGTTCTGCTCACGCTACACGGGAGCCTCTCTGCAGGGAGCAACGCAGCTAAACCACAAGATCTGTGATATCGCCATCAACTGGGCTGGAGGCCTGCACCATGCCAAAAAATTTGAGGCGTCTGGATTTTGCTACGTGAATGACATTGTCATCAGCATTCTGGAGCTGCTAAAGTACCATCCTCGCGTGCTCTACATTGACATCGACATTCACCATGGCGACGGCGTGCAGGAGGCCTTTTACCTCACCGACCGGGTCATGACCGTATCCTTCCACAAGTACGGGAACTACTTTTTTCCCGGGACAGGAGACATGTATGAAGTGGGAGCCGAAAGTGGGCGATATTACTGCTTGAACGTCCCCCTCCGAGATGGGATTGATGACCAGAGCTACAGGCAGTTGTTCCAGCCGGTCATCAAGCAGGTGGTGGACTTTTATCAGCCAACCTGTATTGTTCTTCAGTGTGGGGCTGACTCTCTGGGCTGTGATAGACTGGGCTGTTTTAACCTCAGCATAAGAGGTCACGGGGAGTGTGTGGAGTTCGTGAAGAGCTTCAAAATCCCGCTGCTGGTCCTGGGCGGCGGAGGATACACGGTCCGCAACGTGGCGCGCTGCTGGACCTATGAGACTTCCCTGTTAGTCGAGGAGTCGATCAGTGATGAACTGCCTTACAGCGAGTACTTTGAATATTTTGCTCCTGATTTCACGTTGCACCCAGATGTCAGCACCAGGATAGAAAACCAGAACTCCAGACAGCAGTACCTGGAGCAGATCCGGCAGACGGTATTCGAGAACCTGAAGATGCTGAACCACGCGCCCAGCGTGCAGATCCACGACGTGCCCTCGGACCTGCTGAGCTACGAGCGGACCGACGAGGGAGACCCTGACGAGAGAGGCTCTGAGGAGAACTATTCACGGCCAGAAGCAGCCAATGAATTCTATGATGGTGACCATGACAACGACAAAGAAAGCGACGTTGAAATCTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
