Tag |
Content |
WERAM ID |
WERAM-Orb-0053 |
Ensembl Protein ID |
OBART05G18100.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
5.90e-140 |
467.1 |
97 |
672 |
HDAC |
Class-I |
9.70e-62 |
210.3 |
103 |
662 |
|
Organism |
Oryza barthii |
Domain Profile |
HDAC Class-II
class-2.txt 23 hpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsiylesksikaarlavGavlelvdkv 116 + +++R+++++s l++ +++ + + ++r a+ el+++Hs+e++e+l +a+++ + + + ++l++ s++aa la+G++l++++++ OBART05G18100.1 97 TVTNADRVRNMVSILRRGPIARFISWHSGRPAHAAELLSFHSAEYIEELVQADSAGAN----NNKICECTFLNPGSWDAALLAAGTTLSAMKHI 186 5789*********************************************999544333....34567899************************ PP class-2.txt 117 lkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgs.ga 209 l+g++k+++a+vRPPGHHa++++a+G+C++nn+ +a+kl++++ + +++ +vD+DvH+GnGt e fy+ ++vl++SlH + +gs+ p+ + g OBART05G18100.1 187 LDGHAKIAYALVRPPGHHAQPDRADGYCFLNNAGLAVKLALDSGR-RRVAVVDIDVHYGNGTAEGFYHTDSVLTISLH-MKHGSWGPSHPQsGL 278 *******************************************99.********************************.*****9887655599 PP class-2.txt 210 vdevgegkgegfnvNvawngglmgdaeylaafrevvl 246 vde+g+g+g+g+n+N+++++g+ gda y++a++e+v+ OBART05G18100.1 279 VDETGKGRGLGYNLNIPLPNGS-GDAGYEYAMNELVF 314 ********************99.**********9996 PP class-2.txt 268 gdplgglsvtakcyatltkqllkl....aggrvvlvlEGGynlkaiaeaveavvkaLlg 322 +dp+g++++t+++y+++ + ++++ ++g++++v EGGy+ ++ a++ +a+++++l+ OBART05G18100.1 314 FDPNGRQCLTMDGYRKIGQIMRGMadqhSNGQILIVQEGGYHITYSAYCLHATLEGVLN 372 79*********************9888889************************99985 PP class-2.txt 86 tvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtq 179 ++ + ++l++ s+ aa la+G++l++++++l+g++k+++a+vRPPGHHa++++a+G+C++nn+ +a+kl++++ + +k+ +vD+DvH+GnGt OBART05G18100.1 434 KKLCEGTFLNPGSWGAALLAAGTTLSAMKHILDGHAKIAYALVRPPGHHAQPDRADGYCFLNNAGLAVKLALDSGR-RKVAVVDIDVHYGNGTA 526 4556789*******************************************************************99.***************** PP class-2.txt 180 eifykdpkvlylSlHRydkgsffpesgs.gavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplg 272 e fy+ ++vl++SlH + +gs+ p+ + g+vde+geg+g+g+n+N+++++g+ gda y++a++e+v+p++++F+P+l++ +G+D++++dp+g OBART05G18100.1 527 EGFYHTDSVLTISLH-MKHGSWGPSHPQsGSVDEIGEGRGLGYNLNIPLPNGS-GDAGYEYAMNELVVPAIEKFHPELLVFVVGQDSSTFDPNG 618 ***************.*****988765459*********************99.**************************************** PP class-2.txt 273 glsvtakcyatltkqllkl....aggrvvlvlEGGynlkaiaeaveavvkaLlg 322 ++++t+++y+++ + ++++ ++g++++v EGGy+ ++ a++ +a+++++l+ OBART05G18100.1 619 RQCLTMDGYRKIGQIMRGMadqhSNGQILIVQEGGYHISYSAYCLHATLEGVLN 672 ******************9888889************************99985 PP
HDAC Class-I
class-1.txt 26 rlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaakkLnkk 119 r++ + +++ + + ++ + + a+a+ell+fhs eyie l + ++ a++ + + e + + g ++ + l +G++l+a+k++ ++ OBART05G18100.1 103 RVRNMVSILRRGPIARFISWHSGRPAHAAELLSFHSAEYIEELVQADSAGANNNK-------ICECTFLNPGSWDAALLAAGTTLSAMKHILDG 189 555555555555666777778889999**************99877766655444.......44444456799********************* PP class-1.txt 120 eadiainw.aGGlhhakkseasGfcyvnDivlai.lellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeef...fPgtGdlsdvg 208 +a+ia hha+ ++a G+c++n+ la+ l l +rv +did+h+G+g e fy+td v+t+s+h + ++ P +G ++++g OBART05G18100.1 190 HAKIAYALvRPPGHHAQPDRADGYCFLNNAGLAVkLALDSGRRRVAVVDIDVHYGNGTAEGFYHTDSVLTISLHMKHGSWgpsHPQSGLVDETG 283 ****988624567********************9456666899*******************************7665552236789******* PP class-1.txt 209 aekgkyyavnvPlkdgidDesyekifksv 237 +++g y +n+Pl +g D ye ++++ OBART05G18100.1 284 KGRGLGYNLNIPLPNGSGDAGYEYAMNEL 312 **********************9877665 PP class-1.txt 103 qlitGasleaakkLnkkeadiainw.aGGlhhakkseasGfcyvnDivlai.lellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkyg 194 l +G++l+a+k++ +++a+ia hha+ ++a G+c++n+ la+ l l ++v +did+h+G+g e fy+td v+t+s+h + OBART05G18100.1 451 LLAAGTTLSAMKHILDGHAKIAYALvRPPGHHAQPDRADGYCFLNNAGLAVkLALDSGRRKVAVVDIDVHYGNGTAEGFYHTDSVLTISLHMKH 544 5689*****************988624567********************94466668999******************************765 PP class-1.txt 195 eef...fPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf. 284 ++ P +G+++++g+++g y +n+Pl +g D ye +++++ + ie f+Pe +v+ +G Ds + D+ g l+++g+ ++ ++++ OBART05G18100.1 545 GSWgpsHPQSGSVDEIGEGRGLGYNLNIPLPNGSGDAGYEYAMNELVVPAIEKFHPELLVFVVGQDSSTFDPNGRQCLTMDGYRKIGQIMRGMa 638 5552336889************************************************************************999998887543 PP class-1.txt 285 ....nlpllvlGGGGYtlrnvaRc 304 n ++l++ GGY + a c OBART05G18100.1 639 dqhsNGQILIVQEGGYHISYSAYC 662 2235789**********9988877 PP
|
Protein Sequence (Fasta) | MDKRVIANLM EERRWVEVTN NSRRTTENVY AMFTGSVVWH YPRRLFSFLT LALACVEEGR 60 FRQRLISGWV SYKQIKIFIS CAIQHVPLLD QVPCSITVTN ADRVRNMVSI LRRGPIARFI 120 SWHSGRPAHA AELLSFHSAE YIEELVQADS AGANNNKICE CTFLNPGSWD AALLAAGTTL 180 SAMKHILDGH AKIAYALVRP PGHHAQPDRA DGYCFLNNAG LAVKLALDSG RRRVAVVDID 240 VHYGNGTAEG FYHTDSVLTI SLHMKHGSWG PSHPQSGLVD ETGKGRGLGY NLNIPLPNGS 300 GDAGYEYAMN ELVFDPNGRQ CLTMDGYRKI GQIMRGMADQ HSNGQILIVQ EGGYHITYSA 360 YCLHATLEGV LNLQAPLLDD PLGFYPDDEK YTMQAVDIIK KCWKESIPIY RNPSLNFISK 420 YIEELVQANA VGAKKLCEGT FLNPGSWGAA LLAAGTTLSA MKHILDGHAK IAYALVRPPG 480 HHAQPDRADG YCFLNNAGLA VKLALDSGRR KVAVVDIDVH YGNGTAEGFY HTDSVLTISL 540 HMKHGSWGPS HPQSGSVDEI GEGRGLGYNL NIPLPNGSGD AGYEYAMNEL VVPAIEKFHP 600 ELLVFVVGQD SSTFDPNGRQ CLTMDGYRKI GQIMRGMADQ HSNGQILIVQ EGGYHISYSA 660 YCLHATLEGV LNLQAPLLDD PIAYYPEDEK YTMKVVDIMK KCWKESIPFL KDI 713Protein Fasta Sequence
>OBART05G18100.1|Class-I|Oryza barthii MDKRVIANLMEERRWVEVTNNSRRTTENVYAMFTGSVVWHYPRRLFSFLTLALACVEEGRFRQRLISGWVSYKQIKIFISCAIQHVPLLDQVPCSITVTNADRVRNMVSILRRGPIARFISWHSGRPAHAAELLSFHSAEYIEELVQADSAGANNNKICECTFLNPGSWDAALLAAGTTLSAMKHILDGHAKIAYALVRPPGHHAQPDRADGYCFLNNAGLAVKLALDSGRRRVAVVDIDVHYGNGTAEGFYHTDSVLTISLHMKHGSWGPSHPQSGLVDETGKGRGLGYNLNIPLPNGSGDAGYEYAMNELVFDPNGRQCLTMDGYRKIGQIMRGMADQHSNGQILIVQEGGYHITYSAYCLHATLEGVLNLQAPLLDDPLGFYPDDEKYTMQAVDIIKKCWKESIPIYRNPSLNFISKYIEELVQANAVGAKKLCEGTFLNPGSWGAALLAAGTTLSAMKHILDGHAKIAYALVRPPGHHAQPDRADGYCFLNNAGLAVKLALDSGRRKVAVVDIDVHYGNGTAEGFYHTDSVLTISLHMKHGSWGPSHPQSGSVDEIGEGRGLGYNLNIPLPNGSGDAGYEYAMNELVVPAIEKFHPELLVFVVGQDSSTFDPNGRQCLTMDGYRKIGQIMRGMADQHSNGQILIVQEGGYHISYSAYCLHATLEGVLNLQAPLLDDPIAYYPEDEKYTMKVVDIMKKCWKESIPFLKDI
|
Nucleotide Sequence (Fasta) | ATGGACAAAA GAGTTATAGC CAATCTCATG GAGGAGAGGC GGTGGGTAGA AGTCACCAAC 60 AATAGTAGAC GCACGACGGA AAATGTCTAT GCAATGTTCA CGGGAAGCGT CGTGTGGCAC 120 TACCCGCGGA GATTATTTTC CTTCCTTACT TTGGCTCTCG CATGCGTGGA GGAAGGAAGG 180 TTTAGGCAGA GGCTAATAAG TGGATGGGTA AGCTATAAGC AGATCAAGAT CTTTATCAGC 240 TGCGCCATAC AACACGTGCC TCTGCTCGAC CAGGTACCGT GTAGCATCAC GGTTACGAAC 300 GCCGACCGCG TCCGCAACAT GGTCTCCATC CTCCGCCGCG GCCCCATCGC GCGCTTCATC 360 TCCTGGCACT CCGGCCGCCC CGCCCACGCC GCCGAGCTCC TCTCCTTCCA CTCTGCCGAA 420 TACATAGAGG AGCTCGTGCA AGCAGATTCT GCTGGTGCCA ACAACAACAA GATATGTGAA 480 TGCACTTTCT TGAACCCTGG TTCCTGGGAT GCTGCGCTTC TGGCGGCTGG AACAACCTTA 540 TCAGCGATGA AGCACATACT AGACGGGCAT GCCAAGATTG CCTACGCCTT GGTCCGACCC 600 CCTGGCCATC ATGCGCAACC CGACCGTGCC GATGGCTACT GCTTTCTGAA CAATGCCGGG 660 CTTGCAGTGA AGCTGGCTCT GGATTCAGGG CGCAGAAGGG TCGCCGTTGT TGATATCGAT 720 GTGCACTATG GGAATGGCAC TGCAGAGGGG TTCTACCACA CAGACAGCGT GCTGACGATC 780 TCTCTTCACA TGAAGCATGG TTCATGGGGT CCATCGCATC CCCAGAGCGG CTTGGTTGAT 840 GAGACTGGTA AAGGCAGGGG TCTTGGGTAC AATCTCAATA TCCCTCTGCC TAATGGCAGT 900 GGGGATGCAG GGTATGAATA TGCGATGAAT GAATTAGTCT TTGATCCTAA TGGAAGACAG 960 TGCTTAACCA TGGATGGTTA TAGGAAAATT GGACAAATAA TGAGGGGCAT GGCTGATCAA 1020 CACAGCAATG GTCAAATACT GATTGTCCAG GAAGGAGGTT ATCACATCAC CTATTCGGCA 1080 TATTGTCTGC ATGCAACGCT GGAAGGTGTT TTGAATCTGC AGGCCCCATT GCTTGATGAC 1140 CCATTGGGTT TTTATCCAGA TGATGAAAAA TACACCATGC AAGCCGTGGA CATCATCAAG 1200 AAATGCTGGA AAGAATCTAT TCCGATATAT AGAAATCCAA GCCTCAATTT CATATCAAAA 1260 TACATAGAGG AGCTCGTGCA AGCAAATGCC GTTGGTGCCA AGAAGCTGTG TGAAGGCACT 1320 TTCTTGAACC CTGGATCCTG GGGTGCTGCG CTTCTGGCGG CTGGAACAAC TTTATCAGCG 1380 ATGAAGCACA TACTAGATGG ACATGCCAAG ATTGCCTATG CGTTGGTCCG CCCCCCTGGC 1440 CATCATGCGC AACCGGACCG TGCTGATGGT TACTGCTTCC TGAACAATGC TGGGCTTGCA 1500 GTGAAGCTGG CTCTGGATTC AGGACGCAGA AAGGTTGCTG TTGTTGATAT TGACGTGCAC 1560 TATGGAAATG GCACTGCAGA GGGCTTCTAC CACACAGACA GCGTGCTGAC GATCTCTCTT 1620 CACATGAAGC ATGGTTCATG GGGTCCATCA CATCCCCAGA GTGGCTCGGT GGATGAGATT 1680 GGTGAAGGCA GGGGTCTTGG GTACAATCTC AATATTCCTT TGCCTAATGG CAGTGGGGAT 1740 GCAGGGTATG AGTATGCGAT GAATGAATTA GTTGTTCCAG CCATAGAGAA GTTTCATCCT 1800 GAGCTTTTGG TTTTTGTTGT TGGCCAAGAT TCTAGTACAT TTGATCCCAA TGGAAGACAG 1860 TGCTTAACCA TGGATGGTTA TCGGAAAATT GGGCAAATAA TGAGAGGCAT GGCTGATCAA 1920 CACAGCAATG GTCAAATATT GATCGTGCAG GAAGGGGGTT ATCACATCAG CTATTCGGCA 1980 TATTGTCTGC ATGCAACACT AGAAGGTGTT CTGAATCTAC AAGCCCCGTT GCTTGATGAT 2040 CCAATCGCCT ATTATCCAGA GGATGAGAAA TACACCATGA AAGTTGTGGA CATCATGAAG 2100 AAATGCTGGA AAGAATCTAT TCCATTCTTG AAGGACATAT AG
2143Nucleotide Fasta Sequence
>OBART05G18100.1|Class-I|Oryza barthii ATGGACAAAAGAGTTATAGCCAATCTCATGGAGGAGAGGCGGTGGGTAGAAGTCACCAACAATAGTAGACGCACGACGGAAAATGTCTATGCAATGTTCACGGGAAGCGTCGTGTGGCACTACCCGCGGAGATTATTTTCCTTCCTTACTTTGGCTCTCGCATGCGTGGAGGAAGGAAGGTTTAGGCAGAGGCTAATAAGTGGATGGGTAAGCTATAAGCAGATCAAGATCTTTATCAGCTGCGCCATACAACACGTGCCTCTGCTCGACCAGGTACCGTGTAGCATCACGGTTACGAACGCCGACCGCGTCCGCAACATGGTCTCCATCCTCCGCCGCGGCCCCATCGCGCGCTTCATCTCCTGGCACTCCGGCCGCCCCGCCCACGCCGCCGAGCTCCTCTCCTTCCACTCTGCCGAATACATAGAGGAGCTCGTGCAAGCAGATTCTGCTGGTGCCAACAACAACAAGATATGTGAATGCACTTTCTTGAACCCTGGTTCCTGGGATGCTGCGCTTCTGGCGGCTGGAACAACCTTATCAGCGATGAAGCACATACTAGACGGGCATGCCAAGATTGCCTACGCCTTGGTCCGACCCCCTGGCCATCATGCGCAACCCGACCGTGCCGATGGCTACTGCTTTCTGAACAATGCCGGGCTTGCAGTGAAGCTGGCTCTGGATTCAGGGCGCAGAAGGGTCGCCGTTGTTGATATCGATGTGCACTATGGGAATGGCACTGCAGAGGGGTTCTACCACACAGACAGCGTGCTGACGATCTCTCTTCACATGAAGCATGGTTCATGGGGTCCATCGCATCCCCAGAGCGGCTTGGTTGATGAGACTGGTAAAGGCAGGGGTCTTGGGTACAATCTCAATATCCCTCTGCCTAATGGCAGTGGGGATGCAGGGTATGAATATGCGATGAATGAATTAGTCTTTGATCCTAATGGAAGACAGTGCTTAACCATGGATGGTTATAGGAAAATTGGACAAATAATGAGGGGCATGGCTGATCAACACAGCAATGGTCAAATACTGATTGTCCAGGAAGGAGGTTATCACATCACCTATTCGGCATATTGTCTGCATGCAACGCTGGAAGGTGTTTTGAATCTGCAGGCCCCATTGCTTGATGACCCATTGGGTTTTTATCCAGATGATGAAAAATACACCATGCAAGCCGTGGACATCATCAAGAAATGCTGGAAAGAATCTATTCCGATATATAGAAATCCAAGCCTCAATTTCATATCAAAATACATAGAGGAGCTCGTGCAAGCAAATGCCGTTGGTGCCAAGAAGCTGTGTGAAGGCACTTTCTTGAACCCTGGATCCTGGGGTGCTGCGCTTCTGGCGGCTGGAACAACTTTATCAGCGATGAAGCACATACTAGATGGACATGCCAAGATTGCCTATGCGTTGGTCCGCCCCCCTGGCCATCATGCGCAACCGGACCGTGCTGATGGTTACTGCTTCCTGAACAATGCTGGGCTTGCAGTGAAGCTGGCTCTGGATTCAGGACGCAGAAAGGTTGCTGTTGTTGATATTGACGTGCACTATGGAAATGGCACTGCAGAGGGCTTCTACCACACAGACAGCGTGCTGACGATCTCTCTTCACATGAAGCATGGTTCATGGGGTCCATCACATCCCCAGAGTGGCTCGGTGGATGAGATTGGTGAAGGCAGGGGTCTTGGGTACAATCTCAATATTCCTTTGCCTAATGGCAGTGGGGATGCAGGGTATGAGTATGCGATGAATGAATTAGTTGTTCCAGCCATAGAGAAGTTTCATCCTGAGCTTTTGGTTTTTGTTGTTGGCCAAGATTCTAGTACATTTGATCCCAATGGAAGACAGTGCTTAACCATGGATGGTTATCGGAAAATTGGGCAAATAATGAGAGGCATGGCTGATCAACACAGCAATGGTCAAATATTGATCGTGCAGGAAGGGGGTTATCACATCAGCTATTCGGCATATTGTCTGCATGCAACACTAGAAGGTGTTCTGAATCTACAAGCCCCGTTGCTTGATGATCCAATCGCCTATTATCCAGAGGATGAGAAATACACCATGAAAGTTGTGGACATCATGAAGAAATGCTGGAAAGAATCTATTCCATTCTTGAAGGACATATAG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |