WERAM Information

Tag Content
WERAM ID WERAM-Pot-0100
Ensembl Protein ID POPTR_0009s02560.1
Gene Name POPTR_0009s02560g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0009s02560 POPTR_0009s02560.1 POPTR_0009s02560.1
POPTR_0009s02560 POPTR_0009s02560.2 POPTR_0009s02560.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.00e-36 127.3 41 328
Organism Populus trichocarpa
Domain Profile
  HDAC Class-I
         class-1.txt  18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGa 108
                         +khp    r++ + +++ +  +s  ++  + + a++ ell+fh+ eyi+ l +  ++  + +            + +  g ++ + l +G+
  POPTR_0009s02560.1  41 EKHPENSDRIKNMVSILQKGPISPYISWQHGRPAQVPELLSFHAPEYIDELVEAGKQGGKMIC---------AGTFLNPGSWDAALLAAGT 122
                         678888888888888888888888899999999999999999999999998887777666555.........33345678899999***** PP
         class-1.txt 109 sleaakkLnkkeadiainw.aGGlhhakkseasGfcyvnDivlail.ellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeef 197
                         +l+a+k++ +++ ++a        hha+ ++a G+c++n+  la++  l    k+v+ idid+h+G+g  e fy td+v+tvs+h  + ++
  POPTR_0009s02560.1 123 TLSAMKHILDGHGKLAYALvRPPGHHAQPKQADGYCFLNNAGLAVQlALDSGCKKVTVIDIDVHYGNGTAEGFYRTDKVLTVSLHMNHGSW 213
                         ************999987624567********************972566699********************************977766 PP
         class-1.txt 198 ...fPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf. 284
                             P  G++ + g+++g  y +n+Pl +g  D+ y   +k+++ + ++ feP+++v+ +G Ds a D+ g   l+++g+ e+ ++v+s  
  POPTR_0009s02560.1 214 gpsHPQNGSVGELGEGEGFGYNLNIPLPNGTGDRGYGYAMKKLVVPAVHKFEPDMIVFVVGQDSSAFDPNGRQCLTMDGYREIGRIVHSLa 304
                         3336789*************************************************************************99999998885 PP
         class-1.txt 285 nlp....llvlGGGGYtlrnvaRc 304
                         n +    +l++  GGY ++  a c
  POPTR_0009s02560.1 305 NKHsggkILIVQEGGYHITYSAYC 328
                         43233339********99988876 PP
Protein Sequence
(Fasta)		MAAACSNKII DVFWHEGMLN HETGKGVFDS GTDPGFLDVL EKHPENSDRI KNMVSILQKG 60
PISPYISWQH GRPAQVPELL SFHAPEYIDE LVEAGKQGGK MICAGTFLNP GSWDAALLAA 120
GTTLSAMKHI LDGHGKLAYA LVRPPGHHAQ PKQADGYCFL NNAGLAVQLA LDSGCKKVTV 180
IDIDVHYGNG TAEGFYRTDK VLTVSLHMNH GSWGPSHPQN GSVGELGEGE GFGYNLNIPL 240
PNGTGDRGYG YAMKKLVVPA VHKFEPDMIV FVVGQDSSAF DPNGRQCLTM DGYREIGRIV 300
HSLANKHSGG KILIVQEGGY HITYSAYCLH AILEGVLDLP QPLLCDPIAY YPEDEAFAVK 360
FVEATRNYHK EMVPFLKGT 379
Nucleotide Sequence
(Fasta)		AATGCGCGGA AAATTTTCTC TAAAATTTCT CCCCATCCTC GCAGTCTCAC CTTAAAATCC 60
TCTAAGAATT GCTGTCAGCC ATGGCTGCTG CTTGCTCAAA CAAGATCATA GACGTGTTCT 120
GGCACGAGGG CATGCTAAAC CATGAAACTG GAAAGGGAGT TTTTGACTCA GGAACTGATC 180
CTGGGTTCCT AGACGTGTTA GAGAAGCACC CAGAGAACTC AGACAGGATC AAGAACATGG 240
TTTCTATACT TCAGAAAGGT CCCATCTCTC CATACATTTC TTGGCAACAT GGCAGACCTG 300
CTCAAGTCCC TGAATTGCTC TCTTTTCACG CCCCAGAGTA CATAGATGAA CTAGTTGAAG 360
CAGGTAAACA AGGAGGGAAG ATGATTTGTG CCGGAACTTT CTTAAATCCT GGCTCATGGG 420
ATGCTGCACT TCTTGCTGCT GGCACTACAC TATCAGCAAT GAAGCATATT CTTGACGGGC 480
ATGGAAAGCT TGCTTATGCA TTGGTTAGGC CGCCTGGTCA CCATGCTCAA CCTAAACAAG 540
CAGATGGGTA TTGCTTCCTT AACAATGCTG GTCTTGCGGT TCAATTGGCG TTAGATTCAG 600
GGTGCAAAAA GGTTACAGTT ATTGACATTG ATGTTCATTA TGGAAATGGA ACAGCGGAGG 660
GATTCTATCG GACAGATAAA GTACTTACCG TATCCCTTCA TATGAACCAT GGTTCATGGG 720
GTCCATCTCA CCCACAGAAT GGATCTGTTG GTGAGCTAGG TGAAGGAGAG GGTTTTGGCT 780
ACAATTTGAA CATACCTCTT CCTAATGGGA CAGGCGATAG GGGATATGGG TATGCCATGA 840
AGAAGTTAGT TGTCCCAGCT GTTCACAAAT TTGAACCTGA TATGATAGTT TTTGTTGTTG 900
GCCAAGATTC AAGTGCTTTT GATCCAAATG GAAGGCAATG CTTGACAATG GATGGGTATA 960
GAGAGATTGG ACGGATAGTT CATAGTCTGG CAAATAAACA CAGTGGTGGG AAGATTCTTA 1020
TCGTCCAAGA AGGAGGATAC CACATCACGT ACTCAGCTTA CTGTCTTCAT GCAATACTTG 1080
AAGGTGTGCT TGACCTTCCC CAGCCTCTGT TATGTGATCC CATTGCATAT TACCCAGAGG 1140
ATGAGGCTTT TGCTGTGAAA TTTGTTGAAG CCACCAGAAA TTACCATAAA GAAATGGTTC 1200
CGTTTTTGAA AGGAACATGA 1221
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Met-0052 AES67133 Medicago truncatula 79 3e-177 618
WERAM-Prp-0067 EMJ06546 Prunus persica 78 4e-175 611
WERAM-Glm-0150 GLYMA12G31380.1 Glycine max 77 1e-171 600
WERAM-Mua-0091 GSMUA_Achr6P19520_001 Musa acuminata 74 3e-166 581
WERAM-Lep-0054 LPERR05G14310.1 Leersia perrieri 76 1e-164 576
WERAM-Sol-0084 Solyc06g074080.2.1 Solanum lycopersicum 77 1e-164 576
WERAM-Sot-0016 PGSC0003DMT400015085 Solanum tuberosum 77 4e-164 574
WERAM-Sob-0125 Sb09g021720.1 Sorghum bicolor 75 4e-163 571
WERAM-Brd-0045 BRADI2G24020.1 Brachypodium distachyon 74 1e-162 569
WERAM-Orgl-0054 OGLUM05G19120.1 Oryza glumaepatula 74 4e-162 568
WERAM-Orr-0055 ORUFI05G19220.1 Oryza rufipogon 74 7e-162 567
WERAM-Brr-0156 Bra031628.1-P Brassica rapa 73 9e-162 566
WERAM-Ors-0049 OS05T0440250-01 Oryza sativa 74 1e-161 566
WERAM-Ori-0058 BGIOSGA017971-PA Oryza indica 74 1e-161 566
WERAM-Bro-0161 Bo8g112460.1 Brassica oleracea 73 1e-161 566
WERAM-Org-0053 ORGLA05G0156700.1 Oryza glaberrima 74 1e-161 566
WERAM-Tra-0017 Traes_1BL_B77909838.1 Triticum aestivum 74 4e-161 564
WERAM-Viv-0042 VIT_06s0080g00210.t01 Vitis vinifera 79 9e-160 560
WERAM-Amt-0035 ERN16099 Amborella trichopoda 72 3e-159 558
WERAM-Orni-0050 ONIVA05G18980.1 Oryza nivara 75 5e-159 558
WERAM-Sei-0083 Si022311m Setaria italica 76 3e-158 555
WERAM-Aet-0025 EMT04688 Aegilops tauschii 72 4e-158 555
WERAM-Art-0007 AT1G08460.1 Arabidopsis thaliana 73 4e-158 554
WERAM-Arl-0048 fgenesh2_kg.1__ 860__ AT1G08460.1 Arabidopsis lyrata 73 1e-157 553
WERAM-Orl-0065 KN539375.1_FGP010 Oryza longistaminata 74 9e-157 550
WERAM-Orbr-0062 OB05G25730.1 Oryza brachyantha 73 4e-154 541
WERAM-Tru-0024 TRIUR3_12332-P1 Triticum urartu 73 6e-153 537
WERAM-Orm-0052 OMERI05G15690.1 Oryza meridionalis 74 8e-149 523
WERAM-Php-0020 PP1S142_41V6.1 Physcomitrella patens 67 2e-141 499
WERAM-Orp-0051 OPUNC05G15950.1 Oryza punctata 65 5e-132 468
WERAM-Thc-0113 EOY33305 Theobroma cacao 83 2e-129 459
WERAM-Orb-0053 OBART05G18100.1 Oryza barthii 66 6e-128 454
WERAM-Sem-0041 EFJ29828 Selaginella moellendorffii 62 3e-124 442
WERAM-Zem-0043 GRMZM2G056539_P01 Zea mays 74 2e-113 406
WERAM-Hov-0039 MLOC_38610.1 Hordeum vulgare 75 2e-73 273
WERAM-Osl-0036 ABP01312 Ostreococcus lucimarinus 33 7e-39 158
WERAM-Cag-0018 CAG60803 Candida glabrata 29 2e-35 147
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 32 2e-35 147
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 30 2e-35 147
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 33 1e-34 144
WERAM-Pug-0031 EFP89333 Puccinia graminis 29 1e-34 144
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 30 1e-34 144
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 30 2e-34 143
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 33 6e-34 142
WERAM-Aim-0139 ENSAMEP00000013236.1 Ailuropoda melanoleuca 30 8e-34 141
WERAM-Ran-0201 ENSRNOP00000063689.2 Rattus norvegicus 30 9e-34 141
WERAM-Caf-0161 ENSCAFP00000022990.3 Canis familiaris 32 1e-33 141
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 29 2e-33 140
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 34 2e-33 140
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 31 2e-33 140
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 31 2e-33 140
WERAM-Usm-0012 UM02102P0 Ustilago maydis 32 3e-33 140
WERAM-Mum-0115 ENSMUSP00000033501.8 Mus musculus 31 4e-33 139
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 29 6e-33 139
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 38 6e-33 139
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 33 6e-33 139
WERAM-Kop-0012 CAY68916 Komagataella pastoris 29 7e-33 139
WERAM-Loa-0047 ENSLAFP00000003196.3 Loxodonta africana 33 7e-33 138
WERAM-Mup-0158 ENSMPUP00000013557.1 Mustela putorius furo 31 9e-33 138
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 31 1e-32 138
WERAM-Sus-0177 ENSSSCP00000022636.1 Sus scrofa 32 1e-32 138
WERAM-Eqc-0001 ENSECAP00000001121.1 Equus caballus 30 1e-32 138
WERAM-Otg-0144 ENSOGAP00000012420.2 Otolemur garnettii 30 1e-32 137
WERAM-Put-0014 PTTG_07163P0 Puccinia triticina 28 1e-32 137
WERAM-Myl-0104 ENSMLUP00000008295.2 Myotis lucifugus 33 2e-32 137
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 31 2e-32 137
WERAM-Asg-0010 AAS51704 Ashbya gossypii 31 2e-32 137
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 30 2e-32 137
WERAM-Lab-0047 EDQ99497 Laccaria bicolor 30 3e-32 136
WERAM-Fec-0031 ENSFCAP00000002366.3 Felis catus 29 4e-32 135
WERAM-Mod-0081 ENSMODP00000012731.2 Monodelphis domestica 32 5e-32 135
WERAM-Trv-0041 EHK18675 Trichoderma virens 31 6e-32 135
WERAM-Cap-0109 ENSCPOP00000008049.2 Cavia porcellus 31 8e-32 135
WERAM-Coi-0028 EAS30926 Coccidioides immitis 38 1e-31 135
WERAM-Trr-0039 EGR46026 Trichoderma reesei 31 1e-31 135
WERAM-Ict-0125 ENSSTOP00000012693.2 Ictidomys tridecemlineatus 30 1e-31 134
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 32 1e-31 134
WERAM-Anc-0082 ENSACAP00000007918.3 Anolis carolinensis 32 2e-31 134
WERAM-Ova-0124 ENSOARP00000012678.1 Ovis aries 29 2e-31 134
WERAM-Mae-0111 ENSMEUP00000010640.1 Macropus eugenii 33 2e-31 134
WERAM-Gog-0047 ENSGGOP00000004443.2 Gorilla gorilla 31 3e-31 133
WERAM-Hos-0047 ENSP00000365804.2 Homo sapiens 31 3e-31 133
WERAM-Mam-0153 ENSMMUP00000021637.2 Macaca mulatta 31 3e-31 133
WERAM-Poa-0196 ENSPPYP00000022747.2 Pongo abelii 31 3e-31 133
WERAM-Bot-0122 ENSBTAP00000017618.5 Bos taurus 30 4e-31 133
WERAM-Nol-0078 ENSNLEP00000009627.2 Nomascus leucogenys 31 4e-31 132
WERAM-Orn-0011 ENSONIP00000001061.1 Oreochromis niloticus 31 4e-31 132
WERAM-Chs-0158 ENSCSAP00000009365.1 Chlorocebus sabaeus 31 4e-31 132
WERAM-Paa-0049 ENSPANP00000006915.1 Papio anubis 31 4e-31 132
WERAM-Xet-0155 ENSXETP00000050501.3 Xenopus tropicalis 30 5e-31 132
WERAM-Caa-0034 KGT64501 Candida albicans 28 6e-31 132
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 34 7e-31 132
WERAM-Tut-0056 ENSTTRP00000004443.1 Tursiops truncatus 31 7e-31 132
WERAM-Phn-0010 SNOT_01279 Phaeosphaeria nodorum 34 7e-31 132
WERAM-Pat-0185 ENSPTRP00000037550.5 Pan troglodytes 30 8e-31 132
WERAM-Sah-0012 ENSSHAP00000001165.1 Sarcophilus harrisii 31 1e-30 131
WERAM-Asm-0181 ENSAMXP00000017644.1 Astyanax mexicanus 38 1e-30 131
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 34 1e-30 131
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 37 4e-30 129
WERAM-Chg-0033 EAQ86725 Chaetomium globosum 30 4e-30 129
WERAM-Ten-0061 ENSTNIP00000000291.1 Tetraodon nigroviridis 29 5e-30 129
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 39 6e-30 129
WERAM-Ved-0005 EGY17208 Verticillium dahliae 30 7e-30 129
WERAM-Dan-0022 ENSDNOP00000002136.3 Dasypus novemcinctus 32 8e-30 128
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 35 1e-29 128
WERAM-Tas-0021 ENSTSYP00000002661.1 Tarsius syrichta 30 1e-29 127
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 29 1e-29 127
WERAM-Caj-0022 ENSCJAP00000004409.2 Callithrix jacchus 30 2e-29 127
WERAM-Nec-0012 EFNCRP00000001681 Neurospora crassa 29 2e-29 127
WERAM-Chr-0012 EDP07560 Chlamydomonas reinhardtii 32 2e-29 127
WERAM-Gag-0014 GGTG_04308T0 Gaeumannomyces graminis 29 3e-29 126
WERAM-Tag-0054 ENSTGUP00000003859.1 Taeniopygia guttata 30 4e-29 126
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 37 4e-29 126
Created Date 25-Jun-2016