| Tag |
Content |
| WERAM ID |
WERAM-Orm-0022 |
| Ensembl Protein ID |
OMERI02G09820.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
4.30e-158 |
526.9 |
24 |
337 |
|
| Organism |
Oryza meridionalis |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnygls..kkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedc 92
++v+y+yd++vg+y+ygq+hpmkp+r+++th L+ nygl k+++++p a+ +l++fhs++y+ fl+ v+pe++ + l++fn+g dc
OMERI02G09820.1 24 RRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLANYGLLapAKMQVLRPLPARGIDLCRFHSDDYVAFLRAVTPETQLGQVRALRRFNIGPDC 117
589***********************************963369************************************************** PP
class-1.txt 93 PvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvm 186
Pvfdgl+ ycq+++Gas+ aa kLn+++ diainw+GGlhhakkseasGfcyvnDivlailellk h+rvly+did+hhGDgveeafytt+rvm
OMERI02G09820.1 118 PVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYLDIDIHHGDGVEEAFYTTNRVM 211
********************************************************************************************** PP
class-1.txt 187 tvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkf 280
tvsfhk+g+ +fPgtGd++d+g +gkyy++nvPl+dgidD+sy++ifk++i kv+e+++P +vvlqcGaDsl+gDrlg+fnls kghaecvkf
OMERI02G09820.1 212 TVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPIIGKVMEMYRPGVVVLQCGADSLSGDRLGCFNLSGKGHAECVKF 304
*********.************************************************************************************ PP
class-1.txt 281 vksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
++sfn+pll+lGGGGYt+rnvaRcw+yet+v+l
OMERI02G09820.1 305 IRSFNVPLLLLGGGGYTIRNVARCWCYETGVAL 337
******************************986 PP
|
Protein Sequence
(Fasta) | MDPSSAGAGG NSLASASCGD AQKRRVCYFY DPEVGNYYYG QGHPMKPHRV RMTHALLANY 60
GLLAPAKMQV LRPLPARGID LCRFHSDDYV AFLRAVTPET QLGQVRALRR FNIGPDCPVF 120
DGLYAYCQTY AGASVGAAVK LNHGTHDIAI NWSGGLHHAK KSEASGFCYV NDIVLAILEL 180
LKLHERVLYL DIDIHHGDGV EEAFYTTNRV MTVSFHKFGD YFPGTGDIRD IGYSEGKYYC 240
LNVPLDDGID DDSYQSIFKP IIGKVMEMYR PGVVVLQCGA DSLSGDRLGC FNLSGKGHAE 300
CVKFIRSFNV PLLLLGGGGY TIRNVARCWC YETGVALGEE LREKLPYNEY YEYFGPEYSL 360
YVAASNMENR NTNKQLEEIK CNILDNLSKL QHAPSVQFEE RIPETKLPEP DEDQEDPDER 420
HDPDSDMVLD DNKPTGHSAR SLIHNIGVKK EITETETKDQ HGKRLTTEHK GPEPMAEDLG 480
SSEQAPTADA NAVAVNAPDN ARNEPGSSPK PLPIIHCDHK PSNIFLDSEM VAHVGDFGLA 540
RVLHQDHSDM LEKSSGWATM RGMDMLLQTN TYYQRTMMEK KETQMSKEQE TQKNKRHKNS 600
LHHINSTEWS FLLKGISSRS HAYWRCFERV AENKRQV 637Protein Fasta Sequence
>OMERI02G09820.1|Class-I|Oryza meridionalis
MDPSSAGAGGNSLASASCGDAQKRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLANYGLLAPAKMQVLRPLPARGIDLCRFHSDDYVAFLRAVTPETQLGQVRALRRFNIGPDCPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYLDIDIHHGDGVEEAFYTTNRVMTVSFHKFGDYFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPIIGKVMEMYRPGVVVLQCGADSLSGDRLGCFNLSGKGHAECVKFIRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGEELREKLPYNEYYEYFGPEYSLYVAASNMENRNTNKQLEEIKCNILDNLSKLQHAPSVQFEERIPETKLPEPDEDQEDPDERHDPDSDMVLDDNKPTGHSARSLIHNIGVKKEITETETKDQHGKRLTTEHKGPEPMAEDLGSSEQAPTADANAVAVNAPDNARNEPGSSPKPLPIIHCDHKPSNIFLDSEMVAHVGDFGLARVLHQDHSDMLEKSSGWATMRGMDMLLQTNTYYQRTMMEKKETQMSKEQETQKNKRHKNSLHHINSTEWSFLLKGISSRSHAYWRCFERVAENKRQV |
Nucleotide Sequence
(Fasta) | TAAATATTTA TAAACGGAAG GAGTACTATT AGCCTTGACC CTGATAATTC ATGGAATATC 60
TAGGGCCGCA CTGATTGATC GTGAGCGGAT TGCAAGTTAA AACAACTTAT TAATGATTTA 120
AAAAATATTT ACAAGCAAAA TTTTTATATG TGCGTTATTA AAAACTTAAA ACAAATATAA 180
ACAAATACAT TGAAAATTCA TAAAATTATT AAAATTAAAA TTAAAATTTT AAATTTTAAT 240
AATCGGTGAT TTTGTACAGG GAAAACGGCG AGGCGCCGAG AGCCCATTGT TTGAGACAGC 300
CGTCTCCCCT ATGCGCTCTG TCTCCGCCTT CTATACTTCT AGACCCTTCC ATTCATCTCT 360
CCATCTCTCC GCCCCCTATA TATAAACCCC ACCTTCCCCT CCTCTGCTTC GCTTCCTTCT 420
CCAACAAGCA CCCGACCGCA ACACACACGC GAGCTCCGAG AGAGAGAAAA AAAAACCCAA 480
CCCCGAATTC GGCGGAGGCG GCGGCGATGG ACCCCTCGTC GGCGGGCGCG GGCGGGAACT 540
CGCTGGCGTC GGCGTCGTGC GGCGACGCGC AGAAGCGGCG GGTGTGCTAC TTCTACGACC 600
CGGAGGTGGG CAACTACTAC TACGGGCAGG GGCACCCGAT GAAGCCCCAC CGCGTGAGGA 660
TGACCCACGC GCTGCTCGCC AACTACGGCC TCCTCGCCCC GGCCAAGATG CAGGTGCTCC 720
GCCCGCTCCC CGCCCGCGGC ATCGACCTCT GCCGCTTCCA CTCCGACGAC TACGTCGCCT 780
TCCTCCGCGC CGTCACCCCG GAGACCCAGC TCGGCCAGGT CCGCGCCCTC CGCCGCTTCA 840
ACATCGGCCC GGACTGCCCC GTCTTCGACG GCCTCTACGC CTACTGCCAG ACCTACGCGG 900
GCGCCTCCGT CGGCGCCGCC GTCAAGCTCA ACCACGGCAC CCACGACATC GCCATCAACT 960
GGTCCGGCGG GTTGCACCAC GCCAAGAAGT CCGAGGCCTC CGGCTTCTGC TACGTCAACG 1020
ACATCGTCCT CGCCATCCTC GAGCTCCTCA AGCTCCATGA GCGAGTTCTG TATCTTGATA 1080
TTGATATCCA TCATGGAGAT GGAGTTGAGG AGGCATTCTA CACAACTAAC AGGGTTATGA 1140
CAGTCTCATT TCACAAGTTT GGGGATTATT TCCCGGGGAC AGGGGATATC CGCGATATTG 1200
GGTATTCAGA AGGAAAGTAT TACTGCCTGA ATGTCCCGCT GGATGATGGA ATTGATGATG 1260
ACAGCTACCA GTCCATCTTC AAGCCGATCA TCGGCAAAGT CATGGAGATG TATCGTCCCG 1320
GTGTAGTTGT GCTTCAGTGT GGCGCTGATT CGTTGTCCGG TGATAGGTTG GGCTGTTTCA 1380
ATCTCTCAGG CAAAGGTCAT GCTGAATGTG TTAAGTTCAT TAGGTCTTTC AATGTTCCGT 1440
TACTTCTTCT TGGTGGTGGT GGATATACCA TAAGAAATGT TGCACGCTGC TGGTGTTACG 1500
AGACAGGAGT TGCACTTGGT GAAGAGCTAC GGGAGAAGTT GCCTTACAAC GAGTATTATG 1560
AATATTTTGG TCCAGAATAC AGTCTTTACG TTGCAGCAAG TAACATGGAG AACAGAAATA 1620
CAAACAAGCA ACTGGAGGAA ATAAAATGCA ATATTCTGGA CAATCTCTCA AAACTTCAAC 1680
ATGCTCCTAG CGTCCAATTT GAAGAGCGAA TTCCTGAAAC AAAGCTACCT GAGCCAGATG 1740
AAGATCAAGA GGATCCAGAT GAAAGGCACG ACCCTGACTC TGATATGGTG TTGGATGATA 1800
ACAAACCTAC GGGACACTCA GCAAGAAGCC TTATTCACAA CATCGGAGTA AAGAAAGAAA 1860
TTACTGAAAC AGAGACCAAA GATCAGCATG GTAAGAGATT AACAACTGAA CATAAAGGAC 1920
CAGAACCGAT GGCAGAGGAT CTTGGTTCCT CCGAGCAAGC TCCTACTGCG GATGCAAATG 1980
CGGTGGCCGT CAACGCGCCA GACAACGCCA GGAATGAACC GGGAAGCTCA CCCAAGCCAT 2040
TGCCAATTAT TCACTGTGAT CACAAGCCAA GCAATATTTT CCTAGATAGT GAAATGGTTG 2100
CTCACGTTGG TGATTTTGGG CTTGCAAGAG TCCTGCATCA AGACCATAGT GACATGTTAG 2160
AGAAATCAAG TGGCTGGGCT ACAATGAGAG GAATGGATAT GCTGCTCCAG ACCAACACTT 2220
ACTATCAGAG AACAATGATG GAGAAGAAAG AAACTCAGAT GTCAAAAGAA CAAGAGACGC 2280
AAAAGAACAA GAGACACAAG AATAGCCTGC ATCACATCAA TTCTACAGAA TGGAGTTTCC 2340
TGCTCAAAGG AATCTCCAGC AGATCGCATG CATATTGGAG ATGCTTTGAA AGAGTTGCAG 2400
AGAACAAAAG ACAAGTTTAG
2421Nucleotide Fasta Sequence
>OMERI02G09820.1|Class-I|Oryza meridionalis
TAAATATTTATAAACGGAAGGAGTACTATTAGCCTTGACCCTGATAATTCATGGAATATCTAGGGCCGCACTGATTGATCGTGAGCGGATTGCAAGTTAAAACAACTTATTAATGATTTAAAAAATATTTACAAGCAAAATTTTTATATGTGCGTTATTAAAAACTTAAAACAAATATAAACAAATACATTGAAAATTCATAAAATTATTAAAATTAAAATTAAAATTTTAAATTTTAATAATCGGTGATTTTGTACAGGGAAAACGGCGAGGCGCCGAGAGCCCATTGTTTGAGACAGCCGTCTCCCCTATGCGCTCTGTCTCCGCCTTCTATACTTCTAGACCCTTCCATTCATCTCTCCATCTCTCCGCCCCCTATATATAAACCCCACCTTCCCCTCCTCTGCTTCGCTTCCTTCTCCAACAAGCACCCGACCGCAACACACACGCGAGCTCCGAGAGAGAGAAAAAAAAACCCAACCCCGAATTCGGCGGAGGCGGCGGCGATGGACCCCTCGTCGGCGGGCGCGGGCGGGAACTCGCTGGCGTCGGCGTCGTGCGGCGACGCGCAGAAGCGGCGGGTGTGCTACTTCTACGACCCGGAGGTGGGCAACTACTACTACGGGCAGGGGCACCCGATGAAGCCCCACCGCGTGAGGATGACCCACGCGCTGCTCGCCAACTACGGCCTCCTCGCCCCGGCCAAGATGCAGGTGCTCCGCCCGCTCCCCGCCCGCGGCATCGACCTCTGCCGCTTCCACTCCGACGACTACGTCGCCTTCCTCCGCGCCGTCACCCCGGAGACCCAGCTCGGCCAGGTCCGCGCCCTCCGCCGCTTCAACATCGGCCCGGACTGCCCCGTCTTCGACGGCCTCTACGCCTACTGCCAGACCTACGCGGGCGCCTCCGTCGGCGCCGCCGTCAAGCTCAACCACGGCACCCACGACATCGCCATCAACTGGTCCGGCGGGTTGCACCACGCCAAGAAGTCCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAGCTCCATGAGCGAGTTCTGTATCTTGATATTGATATCCATCATGGAGATGGAGTTGAGGAGGCATTCTACACAACTAACAGGGTTATGACAGTCTCATTTCACAAGTTTGGGGATTATTTCCCGGGGACAGGGGATATCCGCGATATTGGGTATTCAGAAGGAAAGTATTACTGCCTGAATGTCCCGCTGGATGATGGAATTGATGATGACAGCTACCAGTCCATCTTCAAGCCGATCATCGGCAAAGTCATGGAGATGTATCGTCCCGGTGTAGTTGTGCTTCAGTGTGGCGCTGATTCGTTGTCCGGTGATAGGTTGGGCTGTTTCAATCTCTCAGGCAAAGGTCATGCTGAATGTGTTAAGTTCATTAGGTCTTTCAATGTTCCGTTACTTCTTCTTGGTGGTGGTGGATATACCATAAGAAATGTTGCACGCTGCTGGTGTTACGAGACAGGAGTTGCACTTGGTGAAGAGCTACGGGAGAAGTTGCCTTACAACGAGTATTATGAATATTTTGGTCCAGAATACAGTCTTTACGTTGCAGCAAGTAACATGGAGAACAGAAATACAAACAAGCAACTGGAGGAAATAAAATGCAATATTCTGGACAATCTCTCAAAACTTCAACATGCTCCTAGCGTCCAATTTGAAGAGCGAATTCCTGAAACAAAGCTACCTGAGCCAGATGAAGATCAAGAGGATCCAGATGAAAGGCACGACCCTGACTCTGATATGGTGTTGGATGATAACAAACCTACGGGACACTCAGCAAGAAGCCTTATTCACAACATCGGAGTAAAGAAAGAAATTACTGAAACAGAGACCAAAGATCAGCATGGTAAGAGATTAACAACTGAACATAAAGGACCAGAACCGATGGCAGAGGATCTTGGTTCCTCCGAGCAAGCTCCTACTGCGGATGCAAATGCGGTGGCCGTCAACGCGCCAGACAACGCCAGGAATGAACCGGGAAGCTCACCCAAGCCATTGCCAATTATTCACTGTGATCACAAGCCAAGCAATATTTTCCTAGATAGTGAAATGGTTGCTCACGTTGGTGATTTTGGGCTTGCAAGAGTCCTGCATCAAGACCATAGTGACATGTTAGAGAAATCAAGTGGCTGGGCTACAATGAGAGGAATGGATATGCTGCTCCAGACCAACACTTACTATCAGAGAACAATGATGGAGAAGAAAGAAACTCAGATGTCAAAAGAACAAGAGACGCAAAAGAACAAGAGACACAAGAATAGCCTGCATCACATCAATTCTACAGAATGGAGTTTCCTGCTCAAAGGAATCTCCAGCAGATCGCATGCATATTGGAGATGCTTTGAAAGAGTTGCAGAGAACAAAAGACAAGTTTAG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
