WERAM Information


Tag Content
WERAM ID WERAM-Orbr-0024
Ensembl Protein ID OB02G17760.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OB02G17760 OB02G17760.1 OB02G17760.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.80e-161 536.9 24 335
Organism Oryza brachyantha
Domain Profile
  HDAC Class-I

   class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdg 97 
++v+y+yd++vg+y+ygq+hpmkp+r+++th L+ +ygl ++++++p +a +++++fhs +y+ fl++v+pe++ ++l++fnvgedcPvfdg
OB02G17760.1 24 RRVCYFYDTEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLGRMQVLRPLRALDHDFCRFHSADYVAFLRTVTPETQLGRGRQLRRFNVGEDCPVFDG 120
589********************************************************************************************** PP
class-1.txt 98 lfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkyg 194
l+ ycq ++Gas++aa Ln+++ diainw+GGlhhakkseasGfcyvnDivlailellk h+rvlyidid+hhGDgveeafytt+rvmtvsfhk+g
OB02G17760.1 121 LYAYCQSYAGASISAAVMLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKVHERVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFG 217
************************************************************************************************* PP
class-1.txt 195 eeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllvl 291
e +fPgtGd++d+g +gkyy++nvPl+dgidD+sy++ifk++i kv+e+++P+avvlqcGaDsl+gDrlg+fnls kghaecvk+++sfn+pll+l
OB02G17760.1 218 E-YFPGTGDIRDIGYAEGKYYCLNVPLDDGIDDDSYQSIFKPIIGKVMEMYHPDAVVLQCGADSLSGDRLGCFNLSGKGHAECVKYMRSFNVPLLLL 313
*.*********************************************************************************************** PP
class-1.txt 292 GGGGYtlrnvaRcwtyetavvl 313
GGGGYt+rnv+Rcw+yet+v++
OB02G17760.1 314 GGGGYTIRNVSRCWCYETGVAV 335
*******************986 PP

Protein Sequence
(Fasta)
MDPSSAGSGG NSLAAVAGTD AQKRRVCYFY DTEVGNYYYG QGHPMKPHRV RMTHALLAHY 60
GLLGRMQVLR PLRALDHDFC RFHSADYVAF LRTVTPETQL GRGRQLRRFN VGEDCPVFDG 120
LYAYCQSYAG ASISAAVMLN HGTHDIAINW SGGLHHAKKS EASGFCYVND IVLAILELLK 180
VHERVLYIDI DIHHGDGVEE AFYTTNRVMT VSFHKFGEYF PGTGDIRDIG YAEGKYYCLN 240
VPLDDGIDDD SYQSIFKPII GKVMEMYHPD AVVLQCGADS LSGDRLGCFN LSGKGHAECV 300
KYMRSFNVPL LLLGGGGYTI RNVSRCWCYE TGVAVGEELK EKLPYNEYYE YFGPEYSLYV 360
SSSNMENRNT NKQLEEMKCK ILENLSKVEH APSVQFEERI PERKLPERDE DKEDPDRRPD 420
PYFDRFLSAR RRLKHSARSR NTGDTREYTE TEAKDQHGKI PTTEHRGPEP MEEDLGSSKQ 480
APPADANGMA INAPGNVKNE PESSPK 506
Nucleotide Sequence
(Fasta)
ATGGATCCCT CGTCGGCGGG CTCCGGCGGC AACTCGCTGG CGGCGGTGGC GGGGACGGAC 60
GCCCAGAAGC GGCGGGTGTG CTACTTCTAC GACACGGAGG TGGGCAACTA CTACTACGGG 120
CAGGGCCACC CGATGAAGCC CCACCGCGTG CGGATGACCC ACGCGCTGCT CGCCCACTAC 180
GGCCTCCTCG GCCGGATGCA GGTGCTCCGC CCGCTCCGCG CCCTCGACCA CGACTTCTGC 240
CGCTTCCACT CCGCCGACTA CGTCGCCTTC CTCCGCACCG TCACGCCCGA GACGCAGCTC 300
GGCCGGGGCC GCCAGCTCCG GCGCTTCAAC GTCGGCGAGG ACTGCCCGGT CTTCGACGGC 360
CTCTATGCCT ACTGCCAGTC CTACGCGGGC GCCTCCATCA GCGCCGCCGT CATGCTCAAC 420
CACGGCACCC ACGACATCGC CATCAACTGG TCGGGGGGCC TGCACCACGC CAAGAAGTCC 480
GAGGCCTCCG GCTTCTGCTA CGTCAACGAC ATCGTCCTCG CCATCCTCGA ACTCCTCAAG 540
GTCCACGAGC GAGTTCTGTA CATTGATATT GATATCCATC ATGGAGATGG AGTTGAAGAG 600
GCATTCTACA CAACTAATAG GGTTATGACA GTCTCGTTTC ACAAGTTTGG GGAATATTTC 660
CCGGGAACAG GGGACATCCG TGACATTGGG TACGCAGAAG GGAAGTATTA CTGCCTGAAT 720
GTGCCGCTAG ATGATGGAAT TGATGATGAT AGCTACCAGT CCATCTTCAA GCCAATCATC 780
GGCAAAGTTA TGGAGATGTA TCATCCTGAT GCAGTTGTGC TTCAATGTGG TGCTGATTCG 840
TTGTCCGGTG ATAGGTTGGG ATGTTTCAAT CTCTCAGGCA AAGGTCATGC GGAATGTGTT 900
AAGTACATGA GATCGTTCAA TGTTCCGTTG CTACTTCTTG GTGGTGGTGG ATATACCATA 960
AGAAATGTTT CACGGTGCTG GTGTTACGAG ACAGGAGTTG CAGTTGGTGA AGAGCTTAAG 1020
GAAAAATTGC CTTACAATGA GTACTATGAA TATTTTGGTC CAGAATACAG TCTTTACGTT 1080
TCATCAAGTA ACATGGAGAA CAGAAATACA AACAAGCAAT TGGAGGAAAT GAAATGTAAA 1140
ATTCTGGAGA ATCTTTCAAA AGTGGAGCAT GCTCCTAGTG TCCAATTTGA AGAGCGAATT 1200
CCTGAAAGAA AGCTACCTGA GCGAGATGAA GATAAAGAGG ATCCAGATAG AAGGCCCGAC 1260
CCTTACTTTG ATAGGTTTTT GAGTGCTCGC AGACGTCTGA AACACTCAGC AAGAAGTCGA 1320
AACACCGGAG ATACGAGAGA ATATACTGAA ACAGAGGCCA AAGATCAGCA TGGTAAGATA 1380
CCAACAACTG AACATAGAGG ACCAGAACCG ATGGAAGAGG ATCTTGGTTC CTCCAAACAA 1440
GCACCTCCTG CGGATGCAAA TGGGATGGCC ATCAACGCCC CAGGCAATGT CAAGAATGAA 1500
CCGGAAAGCT CACCCAAATG ACCTATGCAC CCCAAGGCAT GATTTGCTAC CTTCAGGCAA 1560
ACACCAGCTC CCCCGTCACG GTTTGCTTCA TATGCTCTTT ACTGGCAGAA ACTGTGTGAA 1620
TCCGTACTGC ATATCGTCAT TTCAAACTCA CTCACCCTGT GGTATTGTAA GATCGTTTCT 1680
TCTGTAGAAT AGTGTAGGAA TCTATTGGTG GCAACACTTG CAGCTAAAGA ATTCCATAGT 1740
GTTCAGGCAA TGCTAGACGT GGAGACATTA GACTGACCAA TTTGGCAATT CCACATGTAA 1800
CATGGACCAA AAGTTACAGT ATTATAGTCT GTTGGAACTC CAGGCCAAAG CACTATGCCT 1860
ACGTGTGTTT GCTCTCTGTT GGTTGTGTTT CGTTCACAGC TACTTCTTCC GACGCATGGA 1920
GTGGGGTGTG GAAACATAAT TAGTGGTGAT TTTTTAATGG AATTAATTGA GT 1973
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orp-0021 OPUNC02G07700.1 Oryza punctata 86 0.0 822
WERAM-Orr-0020 ORUFI02G08620.1 Oryza rufipogon 84 0.0 810
WERAM-Orgl-0022 OGLUM02G08770.1 Oryza glumaepatula 85 0.0 799
WERAM-Ori-0023 BGIOSGA007785-PA Oryza indica 84 0.0 796
WERAM-Ors-0018 OS02T0214900-01 Oryza sativa 84 0.0 790
WERAM-Orm-0022 OMERI02G09820.1 Oryza meridionalis 83 0.0 786
WERAM-Orni-0020 ONIVA02G09910.1 Oryza nivara 84 0.0 777
WERAM-Orb-0020 OBART02G08680.1 Oryza barthii 80 0.0 733
WERAM-Brd-0068 BRADI3G08060.1 Brachypodium distachyon 74 0.0 719
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 78 0.0 716
WERAM-Sob-0066 Sb04g007470.1 Sorghum bicolor 73 0.0 711
WERAM-Sei-0069 Si016908m Setaria italica 74 0.0 711
WERAM-Zem-0099 GRMZM2G172883_P01 Zea mays 73 0.0 703
WERAM-Tra-0253 Traes_6AS_5CF7CCD9E.1 Triticum aestivum 72 0.0 692
WERAM-Aet-0051 EMT16627 Aegilops tauschii 72 0.0 688
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 77 0.0 648
WERAM-Pot-0051 POPTR_0004s21950.1 Populus trichocarpa 78 0.0 645
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 79 0.0 640
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 79 0.0 640
WERAM-Prp-0056 EMJ02177 Prunus persica 68 0.0 637
WERAM-Viv-0012 VIT_03s0038g04240.t01 Vitis vinifera 69 0.0 635
WERAM-Glm-0156 GLYMA13G06010.3 Glycine max 79 0.0 634
WERAM-Thc-0026 EOX98961 Theobroma cacao 68 0.0 632
WERAM-Met-0119 KEH27301 Medicago truncatula 77 2e-180 629
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 68 8e-179 624
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 77 8e-179 624
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 77 1e-178 623
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 77 1e-178 623
WERAM-Amt-0016 ERM94967 Amborella trichopoda 77 6e-177 617
WERAM-Hov-0099 MLOC_71091.1 Hordeum vulgare 79 1e-175 613
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 76 1e-175 613
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 67 5e-163 571
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 67 1e-162 570
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 66 1e-162 570
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 66 1e-162 570
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 66 1e-162 570
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 66 2e-162 570
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 66 2e-162 569
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 66 2e-162 569
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 66 2e-162 569
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 66 2e-162 569
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 66 2e-162 569
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 66 2e-162 569
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 66 2e-162 569
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 66 3e-162 569
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 66 3e-162 568
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 66 3e-162 568
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 65 2e-161 566
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 67 3e-161 565
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 66 7e-161 564
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 66 9e-161 564
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 66 9e-161 564
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 66 1e-160 563
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 69 6e-160 561
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 66 1e-159 560
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 66 2e-159 559
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 65 1e-158 557
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 67 2e-157 553
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 68 3e-157 552
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 67 4e-157 551
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 68 5e-157 551
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 67 5e-157 551
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 66 6e-157 551
WERAM-Mua-0048 GSMUA_Achr2P19590_001 Musa acuminata 60 6e-157 551
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 67 6e-157 551
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 68 9e-157 550
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 68 1e-156 550
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 66 2e-156 550
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 67 3e-156 549
WERAM-Orla-0192 ENSORLP00000021872.1 Oryzias latipes 68 3e-156 549
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 66 3e-156 548
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 66 5e-156 548
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 67 5e-156 548
WERAM-Xim-0229 ENSXMAP00000019038.1 Xiphophorus maculatus 67 5e-156 548
WERAM-Pof-0034 ENSPFOP00000002952.2 Poecilia formosa 67 5e-156 548
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 66 6e-156 548
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 67 4e-155 545
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 67 5e-155 545
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 66 2e-153 539
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 66 3e-153 539
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 66 3e-153 539
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 66 3e-153 538
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 66 4e-153 538
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 61 6e-150 528
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 61 7e-150 528
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 61 1e-149 527
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 66 2e-149 526
WERAM-Coi-0024 EAS33504 Coccidioides immitis 61 3e-149 525
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 60 1e-148 523
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 66 2e-148 523
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 66 2e-148 523
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 61 3e-148 522
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 61 4e-148 522
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 61 6e-148 521
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 62 2e-147 519
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 60 3e-147 519
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 60 3e-146 516
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 62 3e-146 515
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 64 4e-146 515
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 66 4e-146 515
WERAM-Ved-0020 EGY15146 Verticillium dahliae 59 1e-145 513
WERAM-Cym-0014 CMJ129CT Cyanidioschyzon merolae 64 2e-145 513
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 62 4e-145 511
WERAM-Cag-0003 CAG57932 Candida glabrata 62 5e-145 511
WERAM-Caa-0018 KGT69072 Candida albicans 59 9e-145 511
WERAM-Caj-0192 ENSCJAP00000033421.2 Callithrix jacchus 61 2e-144 509
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 61 2e-144 509
Created Date 25-Jun-2016