WERAM Information

Tag Content
WERAM ID WERAM-Orb-0020
Ensembl Protein ID OBART02G08680.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OBART02G08680 OBART02G08680.1 OBART02G08680.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.40e-159 531 24 337
Organism Oryza barthii
Domain Profile
  HDAC Class-I
      class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnygls..kkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedc 92 
                      ++v+y+yd++vg+y+ygq+hpmkp+r+++th L+ +ygl    k+e+++p  a+  +l++fhs++y+ fl+ v+pe++    + l++fn+g dc
  OBART02G08680.1  24 RRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLapAKMEVLRPLPARGIDLCRFHSDDYVAFLRAVTPETQLGQVRALRRFNIGPDC 117
                      589***********************************963369************************************************** PP
      class-1.txt  93 PvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvm 186
                      Pvfdgl+ ycq+++Gas+ aa kLn+++ diainw+GGlhhakkseasGfcyvnDivlailellk h+rvlyidid+hhGDgveeafytt+rvm
  OBART02G08680.1 118 PVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVEEAFYTTNRVM 211
                      ********************************************************************************************** PP
      class-1.txt 187 tvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkf 280
                      tvsfhk+g+ +fPgtGd++d+g  +gkyy++nvPl+dgidD+sy++ifk++i kv+e+++P avvlqcGaDsl+gDrlg+fnls kghaecvkf
  OBART02G08680.1 212 TVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPIIGKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKF 304
                      *********.************************************************************************************ PP
      class-1.txt 281 vksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                      ++sfn+pll+lGGGGYt+rnvaRcw+yet+v+l
  OBART02G08680.1 305 MRSFNVPLLLLGGGGYTIRNVARCWCYETGVAL 337
                      ******************************986 PP
Protein Sequence
(Fasta)		MDPSSAGAGG NSLASASCGD AQKRRVCYFY DPEVGNYYYG QGHPMKPHRV RMTHALLAHY 60
GLLAPAKMEV LRPLPARGID LCRFHSDDYV AFLRAVTPET QLGQVRALRR FNIGPDCPVF 120
DGLYAYCQTY AGASVGAAVK LNHGTHDIAI NWSGGLHHAK KSEASGFCYV NDIVLAILEL 180
LKLHERVLYI DIDIHHGDGV EEAFYTTNRV MTVSFHKFGD YFPGTGDIRD IGYSEGKYYC 240
LNVPLDDGID DDSYQSIFKP IIGKVMEMYR PGAVVLQCGA DSLSGDRLGC FNLSGKGHAE 300
CVKFMRSFNV PLLLLGGGGY TIRNVARCWC YETGVALGEE LQEKLPYNEY YEYFGPEYSL 360
YVAASNMENR NTNKQLEEIK CNILDNLSKL QHAPSVQFQE RIPETKLPEP DEDQEDPDER 420
HDPDSDMVLD DHKPTGHSAR SLIHNIGVKR EITETETKDQ TADANAVAVN APGNARNEPG 480
SSPK 484
Nucleotide Sequence
(Fasta)		ATGGACCCCT CGTCGGCGGG CGCGGGCGGC AACTCGCTGG CGTCGGCGTC GTGCGGCGAC 60
GCGCAGAAGC GGCGGGTGTG CTACTTCTAC GACCCGGAGG TGGGCAACTA CTACTACGGT 120
CAGGGCCACC CGATGAAGCC CCACCGGGTG AGGATGACCC ACGCGCTGCT CGCCCACTAC 180
GGCCTCCTCG CCCCGGCCAA GATGGAGGTG CTCCGCCCGC TCCCCGCCCG CGGCATCGAC 240
CTCTGCCGCT TCCACTCCGA CGACTACGTC GCCTTCCTCC GCGCCGTCAC CCCGGAGACC 300
CAGCTCGGCC AGGTCCGCGC CCTCCGCCGC TTCAACATCG GCCCGGACTG CCCCGTCTTC 360
GACGGCCTCT ACGCCTACTG CCAGACCTAC GCGGGGGCCT CCGTCGGCGC CGCCGTCAAG 420
CTCAACCACG GCACCCACGA CATCGCCATC AACTGGTCCG GCGGGTTGCA CCACGCCAAG 480
AAGTCCGAGG CCTCCGGCTT CTGCTACGTC AACGACATCG TCCTCGCCAT CCTCGAGCTC 540
CTCAAGCTCC ATGAGCGAGT TCTGTATATT GATATTGATA TCCATCATGG AGATGGAGTT 600
GAGGAGGCAT TCTACACAAC AAACAGGGTT ATGACAGTCT CATTTCACAA GTTTGGGGAT 660
TATTTCCCGG GAACAGGGGA CATCCGCGAT ATTGGGTATT CAGAAGGGAA GTATTACTGC 720
CTGAATGTCC CGCTGGATGA TGGAATTGAT GATGACAGCT ACCAGTCCAT CTTCAAGCCG 780
ATCATCGGCA AAGTCATGGA GATGTATCGT CCTGGTGCAG TCGTGCTTCA GTGCGGCGCT 840
GATTCGTTGT CCGGTGATAG GTTGGGCTGT TTCAATCTCT CAGGGAAAGG TCATGCTGAA 900
TGTGTTAAGT TCATGAGGTC TTTCAATGTT CCGTTGCTTC TTCTTGGTGG TGGTGGATAT 960
ACCATAAGAA ATGTTGCACG CTGCTGGTGT TACGAGACAG GAGTTGCACT TGGTGAAGAG 1020
CTACAGGAGA AGTTACCTTA CAATGAGTAT TATGAATATT TTGGTCCAGA ATACAGTCTT 1080
TACGTTGCAG CAAGTAACAT GGAGAACAGA AATACAAACA AGCAACTGGA GGAAATAAAA 1140
TGCAATATTC TGGACAATCT TTCAAAACTT CAACATGCAC CTAGCGTCCA ATTTCAAGAG 1200
CGAATTCCTG AAACAAAGCT ACCTGAGCCA GATGAAGATC AAGAGGATCC AGATGAAAGG 1260
CACGACCCTG ACTCTGATAT GGTGTTGGAT GATCACAAAC CTACGGGACA CTCAGCAAGA 1320
AGCCTTATTC ACAACATCGG AGTAAAGAGA GAAATTACTG AAACAGAGAC CAAAGATCAG 1380
ACTGCGGATG CAAATGCGGT GGCCGTCAAC GCGCCAGGCA ACGCCAGGAA TGAACCGGGA 1440
AGCTCACCCA AATGA 1456
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orr-0019 ORUFI02G08580.1 Oryza rufipogon 100 0.0 868
WERAM-Ors-0018 OS02T0214900-01 Oryza sativa 100 0.0 860
WERAM-Ori-0019 BGIOSGA006874-PA Oryza indica 99 0.0 856
WERAM-Orgl-0021 OGLUM02G08740.1 Oryza glumaepatula 98 0.0 855
WERAM-Orm-0022 OMERI02G09820.1 Oryza meridionalis 98 0.0 850
WERAM-Orni-0020 ONIVA02G09910.1 Oryza nivara 97 0.0 837
WERAM-Orp-0021 OPUNC02G07700.1 Oryza punctata 95 0.0 825
WERAM-Orbr-0024 OB02G17760.1 Oryza brachyantha 85 0.0 739
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 85 0.0 737
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 80 0.0 717
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 79 0.0 700
WERAM-Sob-0066 Sb04g007470.1 Sorghum bicolor 81 0.0 699
WERAM-Sei-0069 Si016908m Setaria italica 81 0.0 696
WERAM-Zem-0099 GRMZM2G172883_P01 Zea mays 80 0.0 694
WERAM-Aet-0051 EMT16627 Aegilops tauschii 80 0.0 682
WERAM-Pot-0051 POPTR_0004s21950.1 Populus trichocarpa 77 0.0 677
WERAM-Thc-0026 EOX98961 Theobroma cacao 78 0.0 669
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 79 0.0 669
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 79 0.0 666
WERAM-Viv-0086 VIT_14s0006g01820.t01 Vitis vinifera 78 0.0 665
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 81 0.0 662
WERAM-Glm-0156 GLYMA13G06010.3 Glycine max 76 0.0 657
WERAM-Prp-0056 EMJ02177 Prunus persica 75 0.0 656
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 81 0.0 651
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 81 0.0 650
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 80 0.0 648
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 80 0.0 648
WERAM-Met-0119 KEH27301 Medicago truncatula 79 0.0 646
WERAM-Amt-0016 ERM94967 Amborella trichopoda 79 0.0 640
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 78 0.0 637
WERAM-Hov-0099 MLOC_71091.1 Hordeum vulgare 82 0.0 637
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 68 8e-163 570
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 68 9e-163 570
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 68 9e-163 570
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 67 1e-162 570
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 67 1e-162 570
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 67 1e-162 570
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 67 2e-162 569
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 67 2e-162 569
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 67 2e-162 569
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 67 2e-162 569
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 67 2e-162 569
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 67 2e-162 569
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 67 2e-162 569
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 67 3e-162 569
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 67 3e-162 568
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 67 3e-162 568
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 67 5e-162 568
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 67 2e-161 566
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 66 3e-161 565
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 68 3e-161 565
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 67 6e-161 564
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 66 8e-161 564
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 67 2e-160 563
WERAM-Mua-0048 GSMUA_Achr2P19590_001 Musa acuminata 66 2e-160 562
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 66 2e-159 559
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 66 3e-159 558
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 67 4e-159 558
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 68 1e-157 553
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 67 2e-157 553
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 67 2e-157 553
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 67 2e-157 553
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 67 3e-157 552
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 69 5e-157 551
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 66 5e-157 551
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 69 8e-157 551
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 68 1e-156 550
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 68 2e-156 549
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 69 2e-156 549
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 69 3e-156 548
WERAM-Orla-0192 ENSORLP00000021872.1 Oryzias latipes 69 4e-156 548
WERAM-Xim-0229 ENSXMAP00000019038.1 Xiphophorus maculatus 69 8e-156 547
WERAM-Pof-0034 ENSPFOP00000002952.2 Poecilia formosa 69 8e-156 547
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 68 2e-155 546
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 66 2e-155 546
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 65 2e-155 546
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 68 4e-155 545
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 68 2e-154 542
WERAM-Tru-0006 TRIUR3_03674-P1 Triticum urartu 79 3e-154 542
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 67 5e-153 538
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 67 9e-153 537
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 67 9e-153 537
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 67 9e-153 537
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 67 1e-152 537
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 67 1e-149 527
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 62 1e-149 526
WERAM-Coi-0024 EAS33504 Coccidioides immitis 56 2e-149 526
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 62 2e-149 526
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 55 4e-149 525
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 61 6e-149 525
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 60 2e-148 523
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 61 2e-148 523
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 61 2e-148 523
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 67 3e-148 522
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 67 3e-148 522
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 62 3e-148 522
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 61 5e-148 521
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 63 3e-147 519
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 64 1e-146 516
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 60 3e-146 515
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 62 1e-145 513
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 66 3e-145 512
WERAM-Ved-0020 EGY15146 Verticillium dahliae 60 4e-145 512
WERAM-Trv-0003 EHK19072 Trichoderma virens 61 7e-145 511
WERAM-Cag-0003 CAG57932 Candida glabrata 62 1e-144 510
WERAM-Caa-0018 KGT69072 Candida albicans 60 1e-144 510
WERAM-Asg-0034 AAS54885 Ashbya gossypii 61 9e-144 507
WERAM-Orl-0071 KN539499.1_FGP001 Oryza longistaminata 97 1e-143 507
WERAM-Cym-0014 CMJ129CT Cyanidioschyzon merolae 64 3e-143 506
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 61 3e-143 505
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 62 5e-143 505
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 58 7e-143 504
WERAM-Trr-0017 EGR48353 Trichoderma reesei 61 8e-143 504
Created Date 25-Jun-2016