| Tag |
Content |
| WERAM ID |
WERAM-Orgl-0021 |
| Ensembl Protein ID |
OGLUM02G08740.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
6.60e-159 |
529.7 |
24 |
337 |
|
| Organism |
Oryza glumaepatula |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnygls..kkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedc 92
++v+y+yd++vg+y+ygq+hpmkp+r+++th L+ +ygl k+e+++p a+ +l++fhs++y+ fl+ v+pe++ + l++fn+g dc
OGLUM02G08740.1 24 RRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLapAKMEVLRPLPARGIDLCRFHSDDYVAFLRAVTPETQLGQVRALRRFNIGPDC 117
589***********************************963369************************************************** PP
class-1.txt 93 PvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvm 186
Pvfdgl+ ycq+++Gas+ aa kLn+++ diainw+GGlhhakkseasGfcyvnDivlailellk h+rvly+did+hhGDgveeafytt+rvm
OGLUM02G08740.1 118 PVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYVDIDIHHGDGVEEAFYTTNRVM 211
********************************************************************************************** PP
class-1.txt 187 tvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkf 280
tvsfhk+g+ +fPgtGd++d+g +gkyy++nvPl+dgidD+sy++ifk++i kv+e+++P avvlqcGaDsl+gDrlg+fnls kghaecvkf
OGLUM02G08740.1 212 TVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPIIGKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKF 304
*********.************************************************************************************ PP
class-1.txt 281 vksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
++sfn+pll+lGGGGYt+rnvaRcw+yet+v+l
OGLUM02G08740.1 305 MRSFNVPLLLLGGGGYTIRNVARCWCYETGVAL 337
******************************986 PP
|
Protein Sequence
(Fasta) | MDPSSAGAGG NSLASSSCGD AQKRRVCYFY DPEVGNYYYG QGHPMKPHRV RMTHALLAHY 60
GLLAPAKMEV LRPLPARGID LCRFHSDDYV AFLRAVTPET QLGQVRALRR FNIGPDCPVF 120
DGLYAYCQTY AGASVGAAVK LNHGTHDIAI NWSGGLHHAK KSEASGFCYV NDIVLAILEL 180
LKLHERVLYV DIDIHHGDGV EEAFYTTNRV MTVSFHKFGD YFPGTGDIRD IGYSEGKYYC 240
LNVPLDDGID DDSYQSIFKP IIGKVMEMYR PGAVVLQCGA DSLSGDRLGC FNLSGKGHAE 300
CVKFMRSFNV PLLLLGGGGY TIRNVARCWC YETGVALGEE LPEKLPYNEY YEYFGPEYSL 360
YVAASNMENR NTNKQLEEIK CNILDNLSKL EHAPSVQFEE RIPETKLPEP DEDQEDPDER 420
HDPDSDMVLD DNKPTGHSAR SLIHNIGVKR EITKTETKDQ HGKRLTTEHK GPEPMAEDLG 480
SSKQAPDVFD IAIDVVSALD YLHQHRPLPI IHCDLKPSNI FLDSAMVAHV GDFGLARVLH 540
QDHSDMLEKS SGWATMRGMD MLLQMALPDN VIDIADQHLL SENNDGEEKN SDGKRTRDTR 600
IACITSILQI GVSCSKESPA DRMHTGDALK ELQRTKDKFS VSLH 644Protein Fasta Sequence
>OGLUM02G08740.1|Class-I|Oryza glumaepatula
MDPSSAGAGGNSLASSSCGDAQKRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMEVLRPLPARGIDLCRFHSDDYVAFLRAVTPETQLGQVRALRRFNIGPDCPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYVDIDIHHGDGVEEAFYTTNRVMTVSFHKFGDYFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPIIGKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGEELPEKLPYNEYYEYFGPEYSLYVAASNMENRNTNKQLEEIKCNILDNLSKLEHAPSVQFEERIPETKLPEPDEDQEDPDERHDPDSDMVLDDNKPTGHSARSLIHNIGVKREITKTETKDQHGKRLTTEHKGPEPMAEDLGSSKQAPDVFDIAIDVVSALDYLHQHRPLPIIHCDLKPSNIFLDSAMVAHVGDFGLARVLHQDHSDMLEKSSGWATMRGMDMLLQMALPDNVIDIADQHLLSENNDGEEKNSDGKRTRDTRIACITSILQIGVSCSKESPADRMHTGDALKELQRTKDKFSVSLH |
Nucleotide Sequence
(Fasta) | ATGGATCCCT CGTCGGCGGG CGCGGGCGGC AACTCGCTGG CGTCGTCGTC GTGCGGCGAC 60
GCGCAGAAGC GGCGGGTGTG CTATTTCTAC GACCCGGAGG TGGGCAACTA CTACTACGGG 120
CAGGGCCACC CGATGAAGCC CCACCGGGTG AGGATGACCC ACGCGCTGCT CGCCCACTAC 180
GGCCTCCTCG CCCCGGCCAA GATGGAGGTG CTCCGCCCGC TCCCCGCCCG CGGCATCGAC 240
CTCTGCCGCT TCCACTCCGA CGACTACGTC GCCTTCCTCC GCGCCGTCAC CCCGGAGACC 300
CAGCTCGGCC AGGTCCGCGC CCTCCGCCGC TTCAACATCG GCCCGGACTG CCCCGTCTTC 360
GACGGCCTCT ACGCCTACTG CCAGACCTAC GCGGGCGCCT CCGTCGGCGC CGCCGTCAAG 420
CTCAACCACG GCACCCACGA CATCGCCATC AACTGGTCCG GCGGGTTGCA CCACGCCAAG 480
AAGTCCGAGG CCTCCGGCTT CTGCTACGTC AACGACATCG TCCTCGCCAT CCTCGAGCTC 540
CTCAAGCTCC ATGAGCGAGT TCTGTATGTT GATATTGATA TCCATCATGG AGATGGAGTT 600
GAGGAGGCTT TCTACACAAC TAACAGGGTT ATGACAGTCT CATTTCACAA GTTTGGGGAT 660
TATTTCCCGG GGACAGGGGA TATCCGCGAC ATTGGGTATT CAGAAGGGAA GTATTACTGC 720
CTGAATGTCC CGCTGGATGA TGGAATTGAT GATGATAGCT ACCAGTCCAT CTTCAAGCCG 780
ATCATCGGCA AAGTCATGGA GATGTATCGT CCTGGTGCAG TTGTGCTTCA GTGTGGCGCT 840
GATTCGTTGT CCGGTGATAG GTTGGGCTGT TTCAATCTCT CAGGGAAAGG TCATGCTGAA 900
TGTGTTAAGT TCATGAGGTC TTTCAATGTT CCGTTACTTC TTCTTGGTGG TGGTGGATAT 960
ACCATAAGAA ATGTTGCACG CTGCTGGTGT TACGAGACAG GAGTTGCACT TGGTGAAGAG 1020
CTACCGGAGA AGTTGCCTTA CAACGAGTAT TATGAATATT TTGGTCCAGA ATACAGTCTT 1080
TACGTTGCAG CAAGTAACAT GGAGAACAGA AATACAAACA AGCAACTGGA GGAAATAAAA 1140
TGCAATATTC TGGACAATCT TTCAAAACTT GAACATGCTC CTAGCGTCCA ATTTGAAGAG 1200
CGAATTCCTG AAACAAAGCT ACCTGAGCCA GATGAAGATC AAGAGGATCC AGATGAAAGG 1260
CACGACCCTG ACTCTGATAT GGTGTTGGAT GATAACAAAC CTACGGGACA CTCAGCAAGA 1320
AGCCTTATTC ACAACATAGG AGTAAAGAGA GAAATTACTA AAACAGAGAC CAAAGATCAG 1380
CATGGTAAGA GATTAACAAC TGAACATAAA GGACCAGAAC CGATGGCAGA GGATCTTGGT 1440
TCCTCCAAGC AAGCTCCTGA TGTGTTCGAC ATTGCCATTG ATGTGGTTTC TGCACTTGAT 1500
TATCTTCACC AACATAGGCC ATTGCCAATT ATTCACTGTG ATCTCAAGCC AAGCAATATT 1560
TTCCTAGATA GTGCAATGGT TGCTCACGTT GGTGATTTTG GGCTTGCAAG AGTCCTGCAT 1620
CAAGACCATA GTGACATGTT AGAGAAATCA AGTGGCTGGG CCACAATGAG AGGAATGGAT 1680
ATGCTGCTCC AGATGGCACT TCCAGACAAT GTGATCGATA TTGCAGACCA ACACTTACTA 1740
TCAGAGAACA ATGATGGAGA AGAAAAAAAC TCAGATGGCA AAAGAACAAG AGACACAAGA 1800
ATAGCCTGCA TCACATCAAT TCTACAGATT GGAGTTTCCT GCTCAAAGGA ATCTCCAGCA 1860
GATCGCATGC ATACTGGAGA TGCTTTGAAA GAGTTGCAGA GAACAAAAGA CAAGTTTAGC 1920
GTGTCCCTGC ATTGA
1936Nucleotide Fasta Sequence
>OGLUM02G08740.1|Class-I|Oryza glumaepatula
ATGGATCCCTCGTCGGCGGGCGCGGGCGGCAACTCGCTGGCGTCGTCGTCGTGCGGCGACGCGCAGAAGCGGCGGGTGTGCTATTTCTACGACCCGGAGGTGGGCAACTACTACTACGGGCAGGGCCACCCGATGAAGCCCCACCGGGTGAGGATGACCCACGCGCTGCTCGCCCACTACGGCCTCCTCGCCCCGGCCAAGATGGAGGTGCTCCGCCCGCTCCCCGCCCGCGGCATCGACCTCTGCCGCTTCCACTCCGACGACTACGTCGCCTTCCTCCGCGCCGTCACCCCGGAGACCCAGCTCGGCCAGGTCCGCGCCCTCCGCCGCTTCAACATCGGCCCGGACTGCCCCGTCTTCGACGGCCTCTACGCCTACTGCCAGACCTACGCGGGCGCCTCCGTCGGCGCCGCCGTCAAGCTCAACCACGGCACCCACGACATCGCCATCAACTGGTCCGGCGGGTTGCACCACGCCAAGAAGTCCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAGCTCCATGAGCGAGTTCTGTATGTTGATATTGATATCCATCATGGAGATGGAGTTGAGGAGGCTTTCTACACAACTAACAGGGTTATGACAGTCTCATTTCACAAGTTTGGGGATTATTTCCCGGGGACAGGGGATATCCGCGACATTGGGTATTCAGAAGGGAAGTATTACTGCCTGAATGTCCCGCTGGATGATGGAATTGATGATGATAGCTACCAGTCCATCTTCAAGCCGATCATCGGCAAAGTCATGGAGATGTATCGTCCTGGTGCAGTTGTGCTTCAGTGTGGCGCTGATTCGTTGTCCGGTGATAGGTTGGGCTGTTTCAATCTCTCAGGGAAAGGTCATGCTGAATGTGTTAAGTTCATGAGGTCTTTCAATGTTCCGTTACTTCTTCTTGGTGGTGGTGGATATACCATAAGAAATGTTGCACGCTGCTGGTGTTACGAGACAGGAGTTGCACTTGGTGAAGAGCTACCGGAGAAGTTGCCTTACAACGAGTATTATGAATATTTTGGTCCAGAATACAGTCTTTACGTTGCAGCAAGTAACATGGAGAACAGAAATACAAACAAGCAACTGGAGGAAATAAAATGCAATATTCTGGACAATCTTTCAAAACTTGAACATGCTCCTAGCGTCCAATTTGAAGAGCGAATTCCTGAAACAAAGCTACCTGAGCCAGATGAAGATCAAGAGGATCCAGATGAAAGGCACGACCCTGACTCTGATATGGTGTTGGATGATAACAAACCTACGGGACACTCAGCAAGAAGCCTTATTCACAACATAGGAGTAAAGAGAGAAATTACTAAAACAGAGACCAAAGATCAGCATGGTAAGAGATTAACAACTGAACATAAAGGACCAGAACCGATGGCAGAGGATCTTGGTTCCTCCAAGCAAGCTCCTGATGTGTTCGACATTGCCATTGATGTGGTTTCTGCACTTGATTATCTTCACCAACATAGGCCATTGCCAATTATTCACTGTGATCTCAAGCCAAGCAATATTTTCCTAGATAGTGCAATGGTTGCTCACGTTGGTGATTTTGGGCTTGCAAGAGTCCTGCATCAAGACCATAGTGACATGTTAGAGAAATCAAGTGGCTGGGCCACAATGAGAGGAATGGATATGCTGCTCCAGATGGCACTTCCAGACAATGTGATCGATATTGCAGACCAACACTTACTATCAGAGAACAATGATGGAGAAGAAAAAAACTCAGATGGCAAAAGAACAAGAGACACAAGAATAGCCTGCATCACATCAATTCTACAGATTGGAGTTTCCTGCTCAAAGGAATCTCCAGCAGATCGCATGCATACTGGAGATGCTTTGAAAGAGTTGCAGAGAACAAAAGACAAGTTTAGCGTGTCCCTGCATTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
