| Tag |
Content |
| WERAM ID |
WERAM-Orgl-0022 |
| Ensembl Protein ID |
OGLUM02G08770.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
6.40e-162 |
539.6 |
24 |
337 |
|
| Organism |
Oryza glumaepatula |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnygls..kkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedc 92
++v+y+yd++vg+y+ygq+hpmkp+r+++th L+ +ygl k+++++p a+ ++l++fhs++y+ fl+ v+pe++ + +++l++fnvgedc
OGLUM02G08770.1 24 RRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLapAKMQVLRPLPARDRDLCRFHSDDYVAFLRAVTPETQLDQIRSLRRFNVGEDC 117
589***********************************963369************************************************** PP
class-1.txt 93 PvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvm 186
Pvfdgl+ ycq+++Gas+ aa kLn+++ diainw+GGlhhakkseasGfcyvnDivlailellk h+rvlyidid+hhGDgveeafytt+rvm
OGLUM02G08770.1 118 PVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVEEAFYTTNRVM 211
********************************************************************************************** PP
class-1.txt 187 tvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkf 280
tvsfhk+g+ +fPgtGd++d+g +gkyy++nvPl+dgidD+sy++ifk++iskv+e+++P avvlqcGaDsl+gDrlg+fnls kghaecvkf
OGLUM02G08770.1 212 TVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPIISKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKF 304
*********.************************************************************************************ PP
class-1.txt 281 vksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
++sfn+pll+lGGGGYt+rnvaRcw+yet+v+l
OGLUM02G08770.1 305 MRSFNVPLLLLGGGGYTIRNVARCWCYETGVAL 337
******************************986 PP
|
Protein Sequence
(Fasta) | MDPSSAGAGG NSLASASCGD AQKRRVCYFY DPEVGNYYYG QGHPMKPHRV RMTHALLAHY 60
GLLAPAKMQV LRPLPARDRD LCRFHSDDYV AFLRAVTPET QLDQIRSLRR FNVGEDCPVF 120
DGLYAYCQTY AGASVGAAVK LNHGTHDIAI NWSGGLHHAK KSEASGFCYV NDIVLAILEL 180
LKLHERVLYI DIDIHHGDGV EEAFYTTNRV MTVSFHKFGD YFPGTGDIRD IGYSEGKYYC 240
LNVPLDDGID DDSYQSIFKP IISKVMEMYR PGAVVLQCGA DSLSGDRLGC FNLSGKGHAE 300
CVKFMRSFNV PLLLLGGGGY TIRNVARCWC YETGVALGEE LREKLPYNEY YEYFGPEYSL 360
FVAASNMENR NTNKQLEEIK CNILDNLSKL QHAPSVQFEE RIPETKLPEP DEDQEDPDER 420
NDPDSDMVLD DHKPMGHSAR SLIHNIGVKR EITETETKDQ HGKRLTTEHK GPEPMADDLG 480
SSKQAPPADA NAVAVNAPGN ARNEPGSSPK Protein Fasta Sequence
>OGLUM02G08770.1|Class-I|Oryza glumaepatula
MDPSSAGAGGNSLASASCGDAQKRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMQVLRPLPARDRDLCRFHSDDYVAFLRAVTPETQLDQIRSLRRFNVGEDCPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFGDYFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPIISKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGEELREKLPYNEYYEYFGPEYSLFVAASNMENRNTNKQLEEIKCNILDNLSKLQHAPSVQFEERIPETKLPEPDEDQEDPDERNDPDSDMVLDDHKPMGHSARSLIHNIGVKREITETETKDQHGKRLTTEHKGPEPMADDLGSSKQAPPADANAVAVNAPGNARNEPGSSPK |
Nucleotide Sequence
(Fasta) | TTGCCTCCTC CGCTCTCCTC TGCTTCGCTT CCTTCTCCAG CAAGCACCCA ACCACAACAC 60
ACACGCGAGC TCCTCGACCT CGAGAGAGAG AAGAAAAAAA AAAAAAACCC AACCCCGAAT 120
TCGGCGTTGG CGGCGGCGGC GGAGGCAGCG GCGATGGACC CCTCGTCGGC GGGCGCCGGC 180
GGCAACTCGC TGGCGTCGGC GTCGTGCGGC GACGCGCAGA AGCGGCGGGT GTGCTACTTC 240
TACGATCCGG AGGTGGGCAA CTACTACTAC GGGCAGGGCC ACCCGATGAA GCCCCACCGC 300
GTGAGGATGA CCCACGCGCT GCTCGCCCAC TACGGCCTCC TCGCCCCGGC CAAGATGCAG 360
GTGCTCCGCC CGCTCCCCGC CCGCGACCGC GACCTCTGCC GCTTCCACTC CGACGACTAC 420
GTCGCCTTCC TCCGCGCCGT CACCCCGGAG ACCCAGCTCG ACCAGATCCG CTCCCTCCGC 480
CGCTTCAACG TCGGCGAGGA CTGCCCCGTC TTCGACGGCC TCTACGCCTA CTGCCAGACC 540
TACGCGGGGG CCTCCGTCGG CGCCGCCGTC AAGCTCAACC ACGGCACCCA CGACATCGCC 600
ATCAACTGGT CCGGCGGCCT GCACCACGCC AAGAAGTCCG AGGCCTCCGG CTTCTGCTAC 660
GTCAACGACA TCGTCCTCGC CATCCTCGAG CTCCTCAAGC TCCACGAGCG AGTTCTGTAT 720
ATTGATATTG ATATCCATCA TGGAGATGGA GTTGAGGAGG CATTCTACAC AACAAACAGG 780
GTTATGACAG TCTCATTTCA CAAGTTTGGG GATTATTTCC CGGGAACAGG GGATATCCGT 840
GACATTGGGT ATTCAGAAGG GAAGTATTAC TGCCTGAATG TCCCGCTGGA TGATGGGATT 900
GATGATGACA GCTACCAGTC CATCTTCAAG CCGATCATCA GCAAAGTCAT GGAGATGTAT 960
CGTCCTGGTG CAGTCGTGCT TCAGTGCGGC GCTGATTCGT TGTCCGGTGA TAGGTTGGGC 1020
TGTTTCAATC TCTCAGGGAA AGGTCATGCT GAATGTGTTA AGTTCATGAG GTCTTTCAAT 1080
GTTCCGTTGC TTCTTCTTGG TGGTGGTGGA TATACCATAA GAAATGTTGC ACGCTGCTGG 1140
TGTTACGAGA CAGGAGTTGC ACTTGGTGAA GAGCTACGGG AGAAGTTGCC TTACAACGAG 1200
TATTATGAAT ATTTTGGTCC AGAATACAGT CTTTTCGTTG CAGCAAGTAA CATGGAGAAC 1260
AGAAATACAA ACAAGCAACT GGAGGAAATA AAATGCAATA TTCTGGACAA TCTTTCAAAG 1320
CTTCAGCATG CTCCTAGCGT CCAATTTGAA GAGCGAATTC CTGAAACAAA GCTACCTGAG 1380
CCAGATGAAG ATCAAGAGGA TCCAGATGAA AGGAACGACC CTGACTCTGA TATGGTGTTG 1440
GATGATCACA AACCTATGGG ACACTCAGCA AGAAGCCTTA TTCACAACAT CGGAGTTAAG 1500
AGAGAAATCA CTGAAACAGA GACCAAAGAT CAGCATGGTA AGAGATTAAC AACTGAACAT 1560
AAAGGACCAG AACCGATGGC AGACGATCTT GGTTCCTCCA AGCAAGCTCC TCCTGCGGAT 1620
GCAAATGCGG TGGCCGTCAA CGCGCCAGGC AACGCCAGGA ATGAACCGGG AAGCTCACCC 1680
AAATGACCGA ACCCACCAGC AGCTATGCAC CAGAAGACCA TGATTTTAGC TACCTTCAGG 1740
ACACGAGCTC TCTGTCAAGG TTTCCTGCAT GCTCTTAGCT GGCAGAAACT GGAGTTAATC 1800
TGTATACTGC ATCTTGTCAT TTCAAACTTA CCCCGAGGTG TTGTATGACT GTCTCTTCTG 1860
TAGGAGTTTA CCATTGTTTC TTTTCTTGAA GTCCATAGTG TTCAGGCAAT ACTGGACGTG 1920
GAGGCATTAG TCTGACTGAC CTATGTACTA CAAAACAAAA CATGTAACGT GAAGCGAGTT 1980
ACAAATTTAC AGTCTGTTAG ACTGTTAGAT GGAGATATGG AATTTCAGGC GAAATCCCCG 2040
TGCCTTGTGT GTCCTCTACG TTGTGTTGCG TACAATACAG ATTACTACTA GTTGTTTTTC 2100
TGGCTTATCA GTGGAACCAT AATTAGCGTA GTTGTTATCA ATGTTTAGGA TGTGTTCGGC 2160
TCTTCCTTTT TTTTTCAGCT TCTACATGCT TGTTTTTCGC
2201Nucleotide Fasta Sequence
>OGLUM02G08770.1|Class-I|Oryza glumaepatula
TTGCCTCCTCCGCTCTCCTCTGCTTCGCTTCCTTCTCCAGCAAGCACCCAACCACAACACACACGCGAGCTCCTCGACCTCGAGAGAGAGAAGAAAAAAAAAAAAAACCCAACCCCGAATTCGGCGTTGGCGGCGGCGGCGGAGGCAGCGGCGATGGACCCCTCGTCGGCGGGCGCCGGCGGCAACTCGCTGGCGTCGGCGTCGTGCGGCGACGCGCAGAAGCGGCGGGTGTGCTACTTCTACGATCCGGAGGTGGGCAACTACTACTACGGGCAGGGCCACCCGATGAAGCCCCACCGCGTGAGGATGACCCACGCGCTGCTCGCCCACTACGGCCTCCTCGCCCCGGCCAAGATGCAGGTGCTCCGCCCGCTCCCCGCCCGCGACCGCGACCTCTGCCGCTTCCACTCCGACGACTACGTCGCCTTCCTCCGCGCCGTCACCCCGGAGACCCAGCTCGACCAGATCCGCTCCCTCCGCCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTACGCCTACTGCCAGACCTACGCGGGGGCCTCCGTCGGCGCCGCCGTCAAGCTCAACCACGGCACCCACGACATCGCCATCAACTGGTCCGGCGGCCTGCACCACGCCAAGAAGTCCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAGCTCCACGAGCGAGTTCTGTATATTGATATTGATATCCATCATGGAGATGGAGTTGAGGAGGCATTCTACACAACAAACAGGGTTATGACAGTCTCATTTCACAAGTTTGGGGATTATTTCCCGGGAACAGGGGATATCCGTGACATTGGGTATTCAGAAGGGAAGTATTACTGCCTGAATGTCCCGCTGGATGATGGGATTGATGATGACAGCTACCAGTCCATCTTCAAGCCGATCATCAGCAAAGTCATGGAGATGTATCGTCCTGGTGCAGTCGTGCTTCAGTGCGGCGCTGATTCGTTGTCCGGTGATAGGTTGGGCTGTTTCAATCTCTCAGGGAAAGGTCATGCTGAATGTGTTAAGTTCATGAGGTCTTTCAATGTTCCGTTGCTTCTTCTTGGTGGTGGTGGATATACCATAAGAAATGTTGCACGCTGCTGGTGTTACGAGACAGGAGTTGCACTTGGTGAAGAGCTACGGGAGAAGTTGCCTTACAACGAGTATTATGAATATTTTGGTCCAGAATACAGTCTTTTCGTTGCAGCAAGTAACATGGAGAACAGAAATACAAACAAGCAACTGGAGGAAATAAAATGCAATATTCTGGACAATCTTTCAAAGCTTCAGCATGCTCCTAGCGTCCAATTTGAAGAGCGAATTCCTGAAACAAAGCTACCTGAGCCAGATGAAGATCAAGAGGATCCAGATGAAAGGAACGACCCTGACTCTGATATGGTGTTGGATGATCACAAACCTATGGGACACTCAGCAAGAAGCCTTATTCACAACATCGGAGTTAAGAGAGAAATCACTGAAACAGAGACCAAAGATCAGCATGGTAAGAGATTAACAACTGAACATAAAGGACCAGAACCGATGGCAGACGATCTTGGTTCCTCCAAGCAAGCTCCTCCTGCGGATGCAAATGCGGTGGCCGTCAACGCGCCAGGCAACGCCAGGAATGAACCGGGAAGCTCACCCAAATGACCGAACCCACCAGCAGCTATGCACCAGAAGACCATGATTTTAGCTACCTTCAGGACACGAGCTCTCTGTCAAGGTTTCCTGCATGCTCTTAGCTGGCAGAAACTGGAGTTAATCTGTATACTGCATCTTGTCATTTCAAACTTACCCCGAGGTGTTGTATGACTGTCTCTTCTGTAGGAGTTTACCATTGTTTCTTTTCTTGAAGTCCATAGTGTTCAGGCAATACTGGACGTGGAGGCATTAGTCTGACTGACCTATGTACTACAAAACAAAACATGTAACGTGAAGCGAGTTACAAATTTACAGTCTGTTAGACTGTTAGATGGAGATATGGAATTTCAGGCGAAATCCCCGTGCCTTGTGTGTCCTCTACGTTGTGTTGCGTACAATACAGATTACTACTAGTTGTTTTTCTGGCTTATCAGTGGAACCATAATTAGCGTAGTTGTTATCAATGTTTAGGATGTGTTCGGCTCTTCCTTTTTTTTTCAGCTTCTACATGCTTGTTTTTCGC
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
