| Tag |
Content |
| WERAM ID |
WERAM-Ori-0023 |
| Ensembl Protein ID |
BGIOSGA007785-PA |
| Gene Name |
OsI_06369 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
5.80e-162 |
539.5 |
24 |
337 |
|
| Organism |
Oryza indica |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnygls..kkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvged 91
++v+y+yd++vg+y+ygq+hpmkp+r+++th L+ +ygl k+++++p a+ ++l++fhs++y+ fl+ v+pe++ + +++l++fnvged
BGIOSGA007785-PA 24 RRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLapAKMQVLRPLPARDRDLCRFHSDDYVAFLRAVTPETQLDQIRSLRRFNVGED 116
589***********************************963369************************************************* PP
class-1.txt 92 cPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdr 184
cPvfdgl+ ycq+++Gas+ aa kLn+++ diainw+GGlhhakkseasGfcyvnDivlailellk h+rvlyidid+hhGDgveeafytt+r
BGIOSGA007785-PA 117 CPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVEEAFYTTNR 209
********************************************************************************************* PP
class-1.txt 185 vmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaec 277
vmtvsfhk+g+ +fPgtGd++d+g +gkyy++nvPl+dgidD+sy++ifk++iskv+e+++P avvlqcGaDsl+gDrlg+fnls kghaec
BGIOSGA007785-PA 210 VMTVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPIISKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAEC 301
***********.********************************************************************************* PP
class-1.txt 278 vkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
vkf++sfn+pll+lGGGGYt+rnvaRcw+yet+v+l
BGIOSGA007785-PA 302 VKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVAL 337
*********************************986 PP
|
Protein Sequence
(Fasta) | MDPSSAGAGG NSLASASCGD AQKRRVCYFY DPEVGNYYYG QGHPMKPHRV RMTHALLAHY 60
GLLAPAKMQV LRPLPARDRD LCRFHSDDYV AFLRAVTPET QLDQIRSLRR FNVGEDCPVF 120
DGLYAYCQTY AGASVGAAVK LNHGTHDIAI NWSGGLHHAK KSEASGFCYV NDIVLAILEL 180
LKLHERVLYI DIDIHHGDGV EEAFYTTNRV MTVSFHKFGD YFPGTGDIRD IGYSEGKYYC 240
LNVPLDDGID DDSYQSIFKP IISKVMEMYR PGAVVLQCGA DSLSGDRLGC FNLSGKGHAE 300
CVKFMRSFNV PLLLLGGGGY TIRNVARCWC YETGVALGEE LREKLPYNEY YEYFGPEYSL 360
FVAASNMENR NTNKQLEEIK CNILDNLSKL QHAPSVQFEE RIPETKLPEP DEDQEDPDER 420
HDPDSDMVLD DHKPMGHSAR SLIRNIEVKR EITESETKDQ HGKRLTTEHK GPEPMADDLG 480
SSKQAPPADA NAVAVNAPGN ARNDPGSSPK Protein Fasta Sequence
>BGIOSGA007785-PA|Class-I|Oryza indica
MDPSSAGAGGNSLASASCGDAQKRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMQVLRPLPARDRDLCRFHSDDYVAFLRAVTPETQLDQIRSLRRFNVGEDCPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFGDYFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPIISKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGEELREKLPYNEYYEYFGPEYSLFVAASNMENRNTNKQLEEIKCNILDNLSKLQHAPSVQFEERIPETKLPEPDEDQEDPDERHDPDSDMVLDDHKPMGHSARSLIRNIEVKREITESETKDQHGKRLTTEHKGPEPMADDLGSSKQAPPADANAVAVNAPGNARNDPGSSPK |
Nucleotide Sequence
(Fasta) | ATGGACCCCT CGTCGGCGGG CGCGGGCGGG AACTCGCTGG CGTCGGCGTC GTGCGGCGAC 60
GCGCAGAAGC GGCGGGTGTG CTACTTCTAC GACCCGGAGG TGGGCAACTA CTACTACGGT 120
CAGGGGCACC CGATGAAGCC CCACCGGGTG AGGATGACCC ACGCGCTGCT CGCCCACTAC 180
GGCCTCCTCG CCCCGGCCAA GATGCAGGTG CTCCGCCCGC TCCCCGCCCG CGACCGCGAC 240
CTCTGCCGCT TCCACTCCGA CGACTACGTC GCCTTCCTCC GCGCCGTCAC CCCGGAGACC 300
CAGCTCGACC AGATCCGCTC CCTCCGCCGC TTCAACGTCG GCGAGGACTG CCCCGTCTTC 360
GACGGCCTCT ACGCCTACTG CCAGACCTAC GCGGGGGCCT CCGTCGGCGC CGCCGTCAAG 420
CTCAACCACG GCACCCACGA CATCGCCATC AACTGGTCCG GCGGGTTGCA CCACGCCAAG 480
AAGTCCGAGG CCTCCGGCTT CTGCTACGTC AACGACATCG TCCTCGCCAT CCTCGAGCTC 540
CTCAAGCTCC ATGAGCGAGT TCTGTATATT GATATTGATA TCCATCATGG AGATGGAGTT 600
GAGGAGGCAT TCTACACAAC AAACAGGGTT ATGACAGTCT CATTTCACAA GTTTGGGGAT 660
TATTTCCCGG GAACAGGGGA TATCCGTGAC ATTGGGTATT CAGAGGGGAA GTATTACTGC 720
CTGAATGTCC CGCTGGATGA TGGGATTGAT GATGACAGCT ACCAGTCCAT CTTCAAGCCG 780
ATCATCAGCA AAGTCATGGA GATGTATCGT CCTGGTGCAG TCGTGCTTCA GTGCGGCGCT 840
GATTCGTTGT CCGGTGATAG GTTGGGCTGT TTCAATCTCT CAGGGAAAGG TCATGCAGAA 900
TGTGTAAAGT TCATGAGGTC TTTCAATGTT CCGTTGCTTC TTCTTGGTGG TGGTGGATAT 960
ACCATAAGAA ATGTTGCACG CTGCTGGTGT TACGAGACAG GAGTTGCACT TGGTGAAGAG 1020
CTACGGGAGA AGTTGCCCTA CAACGAGTAT TATGAATATT TTGGTCCAGA ATACAGTCTT 1080
TTCGTTGCAG CAAGTAACAT GGAGAACAGA AATACAAACA AGCAATTGGA GGAAATAAAA 1140
TGCAACATTC TGGACAATCT TTCAAAACTT CAACATGCTC CTAGTGTCCA ATTTGAAGAG 1200
CGAATTCCTG AAACAAAGTT ACCTGAGCCA GATGAAGATC AAGAGGATCC AGATGAAAGG 1260
CACGACCCTG ACTCTGATAT GGTATTGGAT GATCACAAAC CTATGGGACA CTCAGCAAGA 1320
AGCCTTATTC GCAACATCGA AGTTAAGAGA GAAATCACTG AATCAGAGAC CAAAGATCAG 1380
CATGGTAAGA GATTGACAAC TGAACATAAA GGACCAGAAC CGATGGCAGA CGATCTTGGT 1440
TCCTCCAAGC AAGCTCCTCC TGCGGATGCA AATGCGGTGG CCGTCAACGC GCCAGGCAAC 1500
GCCAGGAATG ACCCGGGAAG CTCACCCAAA TGA
1534Nucleotide Fasta Sequence
>BGIOSGA007785-PA|Class-I|Oryza indica
ATGGACCCCTCGTCGGCGGGCGCGGGCGGGAACTCGCTGGCGTCGGCGTCGTGCGGCGACGCGCAGAAGCGGCGGGTGTGCTACTTCTACGACCCGGAGGTGGGCAACTACTACTACGGTCAGGGGCACCCGATGAAGCCCCACCGGGTGAGGATGACCCACGCGCTGCTCGCCCACTACGGCCTCCTCGCCCCGGCCAAGATGCAGGTGCTCCGCCCGCTCCCCGCCCGCGACCGCGACCTCTGCCGCTTCCACTCCGACGACTACGTCGCCTTCCTCCGCGCCGTCACCCCGGAGACCCAGCTCGACCAGATCCGCTCCCTCCGCCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTACGCCTACTGCCAGACCTACGCGGGGGCCTCCGTCGGCGCCGCCGTCAAGCTCAACCACGGCACCCACGACATCGCCATCAACTGGTCCGGCGGGTTGCACCACGCCAAGAAGTCCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAGCTCCATGAGCGAGTTCTGTATATTGATATTGATATCCATCATGGAGATGGAGTTGAGGAGGCATTCTACACAACAAACAGGGTTATGACAGTCTCATTTCACAAGTTTGGGGATTATTTCCCGGGAACAGGGGATATCCGTGACATTGGGTATTCAGAGGGGAAGTATTACTGCCTGAATGTCCCGCTGGATGATGGGATTGATGATGACAGCTACCAGTCCATCTTCAAGCCGATCATCAGCAAAGTCATGGAGATGTATCGTCCTGGTGCAGTCGTGCTTCAGTGCGGCGCTGATTCGTTGTCCGGTGATAGGTTGGGCTGTTTCAATCTCTCAGGGAAAGGTCATGCAGAATGTGTAAAGTTCATGAGGTCTTTCAATGTTCCGTTGCTTCTTCTTGGTGGTGGTGGATATACCATAAGAAATGTTGCACGCTGCTGGTGTTACGAGACAGGAGTTGCACTTGGTGAAGAGCTACGGGAGAAGTTGCCCTACAACGAGTATTATGAATATTTTGGTCCAGAATACAGTCTTTTCGTTGCAGCAAGTAACATGGAGAACAGAAATACAAACAAGCAATTGGAGGAAATAAAATGCAACATTCTGGACAATCTTTCAAAACTTCAACATGCTCCTAGTGTCCAATTTGAAGAGCGAATTCCTGAAACAAAGTTACCTGAGCCAGATGAAGATCAAGAGGATCCAGATGAAAGGCACGACCCTGACTCTGATATGGTATTGGATGATCACAAACCTATGGGACACTCAGCAAGAAGCCTTATTCGCAACATCGAAGTTAAGAGAGAAATCACTGAATCAGAGACCAAAGATCAGCATGGTAAGAGATTGACAACTGAACATAAAGGACCAGAACCGATGGCAGACGATCTTGGTTCCTCCAAGCAAGCTCCTCCTGCGGATGCAAATGCGGTGGCCGTCAACGCGCCAGGCAACGCCAGGAATGACCCGGGAAGCTCACCCAAATGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
