| Tag |
Content |
| WERAM ID |
WERAM-Orl-0006 |
| Ensembl Protein ID |
KN538683.1_FGP175 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
3.20e-122 |
408.6 |
19 |
342 |
|
| Organism |
Oryza longistaminata |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae....elskelkkfnv 88
++v+y+yd+ +++++++++h+m+p r++++h+Lv yg+ ++++++++ a+ +e+ +fhs ey+++l+ +pe+ +k ++++
KN538683.1_FGP175 19 RRVCYYYDPGIAHIKFSDDHVMVPARVAMAHSLVGVYGMLGDMRRLRTRPATEAEIRRFHSPEYVDLLRDLTPESYAndavLRQKAEGHHGI 110
589**********************************************************************9877443312244456677 PP
class-1.txt 89 g..edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
g +dcP fd l++yc+ ++G+sl+aa+ L ++++diainw+GG+hha ++a+GfcyvnDivlai ell +++rv+y+did hhGDgv++a
KN538683.1_FGP175 111 GgdDDCPAFDRLWKYCRGYAGGSLAAARALVDGSSDIAINWSGGMHHASACKATGFCYVNDIVLAINELLGTFSRVIYVDIDAHHGDGVQDA 202
52269*************************************************************************************** PP
class-1.txt 179 fyttdrvmtvsfhkyge.....effPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlg 265
f ++rvmt+sfh+yg+ +ffPg+G ++++g + gk+y+vnvPl+ g++D+ y+++f +++ k +e+f+Pea+vlqcGaDsl+gDrlg
KN538683.1_FGP175 203 FLDSNRVMTLSFHRYGKitphkNFFPGSGAVNEIGDGAGKHYSVNVPLDAGVRDDVYHTLFMPIVGKAMEVFQPEAIVLQCGADSLSGDRLG 294
***************85444448********************************************************************* PP
class-1.txt 266 efnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
+ls++ghaecv f++ fnlpll+lGGGGYt++ va +w+yetav++
KN538683.1_FGP175 295 GMELSVRGHAECVGFLRGFNLPLLLLGGGGYTINHVASAWCYETAVAV 342
*********************************************986 PP
|
Protein Sequence
(Fasta) | MATEGNSLPS PSCADDKKRR VCYYYDPGIA HIKFSDDHVM VPARVAMAHS LVGVYGMLGD 60
MRRLRTRPAT EAEIRRFHSP EYVDLLRDLT PESYANDAVL RQKAEGHHGI GGDDDCPAFD 120
RLWKYCRGYA GGSLAAARAL VDGSSDIAIN WSGGMHHASA CKATGFCYVN DIVLAINELL 180
GTFSRVIYVD IDAHHGDGVQ DAFLDSNRVM TLSFHRYGKI TPHKNFFPGS GAVNEIGDGA 240
GKHYSVNVPL DAGVRDDVYH TLFMPIVGKA MEVFQPEAIV LQCGADSLSG DRLGGMELSV 300
RGHAECVGFL RGFNLPLLLL GGGGYTINHV ASAWCYETAV AVGKEGELPD DIEIPSHGYE 360
LMYKNQGNKL HYQKSTATAA RKRSSSTEVT KGKVLEHLSQ VKRAPSVQFQ ERRGGDNAAG 420
VELYYERPPS LEDDEPAQRL HRLCFPGLTK RIKLS 455Protein Fasta Sequence
>KN538683.1_FGP175|Class-I|Oryza longistaminata
MATEGNSLPSPSCADDKKRRVCYYYDPGIAHIKFSDDHVMVPARVAMAHSLVGVYGMLGDMRRLRTRPATEAEIRRFHSPEYVDLLRDLTPESYANDAVLRQKAEGHHGIGGDDDCPAFDRLWKYCRGYAGGSLAAARALVDGSSDIAINWSGGMHHASACKATGFCYVNDIVLAINELLGTFSRVIYVDIDAHHGDGVQDAFLDSNRVMTLSFHRYGKITPHKNFFPGSGAVNEIGDGAGKHYSVNVPLDAGVRDDVYHTLFMPIVGKAMEVFQPEAIVLQCGADSLSGDRLGGMELSVRGHAECVGFLRGFNLPLLLLGGGGYTINHVASAWCYETAVAVGKEGELPDDIEIPSHGYELMYKNQGNKLHYQKSTATAARKRSSSTEVTKGKVLEHLSQVKRAPSVQFQERRGGDNAAGVELYYERPPSLEDDEPAQRLHRLCFPGLTKRIKLS |
Nucleotide Sequence
(Fasta) | ATGGCCACCG AGGGGAACTC GCTACCGTCG CCGTCGTGCG CCGACGACAA GAAGCGGCGG 60
GTGTGCTACT ACTACGACCC GGGCATCGCC CACATCAAAT TCAGCGACGA CCATGTCATG 120
GTGCCCGCCC GCGTCGCCAT GGCGCACAGC CTCGTCGGCG TCTACGGCAT GCTCGGCGAC 180
ATGCGCCGCC TCCGCACGAG ACCCGCCACG GAGGCGGAGA TCCGCCGCTT CCACTCGCCG 240
GAGTACGTCG ACCTCCTCCG CGACCTCACC CCGGAGAGCT ACGCCAACGA CGCCGTGCTT 300
CGGCAGAAGG CGGAGGGTCA CCACGGCATC GGCGGCGACG ACGATTGCCC CGCCTTCGAC 360
CGCCTCTGGA AGTACTGCCG CGGCTACGCC GGCGGGTCGC TCGCCGCGGC GCGCGCGCTC 420
GTCGACGGCT CCTCCGACAT CGCCATCAAC TGGTCCGGCG GCATGCACCA CGCCTCCGCC 480
TGCAAGGCCA CCGGCTTCTG CTACGTCAAC GACATCGTGC TCGCCATCAA CGAGCTCCTC 540
GGCACCTTCA GCCGGGTCAT CTACGTCGAC ATCGACGCGC ACCACGGCGA CGGCGTGCAG 600
GATGCCTTCT TGGACTCCAA CCGGGTCATG ACGCTGTCGT TCCACCGGTA CGGCAAAATC 660
ACGCCCCACA AGAACTTCTT CCCGGGCTCC GGCGCCGTCA ACGAAATCGG CGACGGCGCC 720
GGCAAGCACT ACAGCGTGAA CGTGCCGCTG GACGCCGGCG TCCGCGACGA CGTGTACCAC 780
ACGCTGTTCA TGCCGATCGT GGGCAAGGCC ATGGAGGTGT TCCAGCCGGA GGCCATCGTG 840
CTGCAGTGCG GCGCCGACTC GCTCTCCGGC GACCGCCTCG GCGGCATGGA GCTGTCGGTG 900
CGGGGCCACG CGGAGTGCGT CGGCTTCCTC CGCGGGTTCA ACCTGCCGCT GCTCCTCCTC 960
GGCGGCGGCG GCTACACCAT CAACCACGTC GCCTCCGCGT GGTGCTACGA GACGGCGGTC 1020
GCCGTCGGCA AGGAGGGGGA GCTCCCCGAC GACATAGAGA TACCCAGCCA CGGCTACGAG 1080
CTCATGTACA AGAACCAGGG GAACAAGCTC CATTACCAGA AGTCGACAGC GACGGCGGCG 1140
AGAAAGAGGT CGAGCAGCAC GGAGGTCACC AAGGGGAAGG TGCTCGAGCA CCTGTCGCAG 1200
GTCAAGCGCG CGCCGAGCGT GCAATTCCAG GAGCGACGCG GCGGCGACAA TGCCGCCGGA 1260
GTTGAGCTCT ACTACGAGCG CCCTCCGAGC CTGGAAGACG ACGAACCCGC GCAGAGGCTG 1320
CACCGCCTCT GCTTCCCCGG CCTGACGAAG CGTATTAAGC TTAGTTAG
1369Nucleotide Fasta Sequence
>KN538683.1_FGP175|Class-I|Oryza longistaminata
ATGGCCACCGAGGGGAACTCGCTACCGTCGCCGTCGTGCGCCGACGACAAGAAGCGGCGGGTGTGCTACTACTACGACCCGGGCATCGCCCACATCAAATTCAGCGACGACCATGTCATGGTGCCCGCCCGCGTCGCCATGGCGCACAGCCTCGTCGGCGTCTACGGCATGCTCGGCGACATGCGCCGCCTCCGCACGAGACCCGCCACGGAGGCGGAGATCCGCCGCTTCCACTCGCCGGAGTACGTCGACCTCCTCCGCGACCTCACCCCGGAGAGCTACGCCAACGACGCCGTGCTTCGGCAGAAGGCGGAGGGTCACCACGGCATCGGCGGCGACGACGATTGCCCCGCCTTCGACCGCCTCTGGAAGTACTGCCGCGGCTACGCCGGCGGGTCGCTCGCCGCGGCGCGCGCGCTCGTCGACGGCTCCTCCGACATCGCCATCAACTGGTCCGGCGGCATGCACCACGCCTCCGCCTGCAAGGCCACCGGCTTCTGCTACGTCAACGACATCGTGCTCGCCATCAACGAGCTCCTCGGCACCTTCAGCCGGGTCATCTACGTCGACATCGACGCGCACCACGGCGACGGCGTGCAGGATGCCTTCTTGGACTCCAACCGGGTCATGACGCTGTCGTTCCACCGGTACGGCAAAATCACGCCCCACAAGAACTTCTTCCCGGGCTCCGGCGCCGTCAACGAAATCGGCGACGGCGCCGGCAAGCACTACAGCGTGAACGTGCCGCTGGACGCCGGCGTCCGCGACGACGTGTACCACACGCTGTTCATGCCGATCGTGGGCAAGGCCATGGAGGTGTTCCAGCCGGAGGCCATCGTGCTGCAGTGCGGCGCCGACTCGCTCTCCGGCGACCGCCTCGGCGGCATGGAGCTGTCGGTGCGGGGCCACGCGGAGTGCGTCGGCTTCCTCCGCGGGTTCAACCTGCCGCTGCTCCTCCTCGGCGGCGGCGGCTACACCATCAACCACGTCGCCTCCGCGTGGTGCTACGAGACGGCGGTCGCCGTCGGCAAGGAGGGGGAGCTCCCCGACGACATAGAGATACCCAGCCACGGCTACGAGCTCATGTACAAGAACCAGGGGAACAAGCTCCATTACCAGAAGTCGACAGCGACGGCGGCGAGAAAGAGGTCGAGCAGCACGGAGGTCACCAAGGGGAAGGTGCTCGAGCACCTGTCGCAGGTCAAGCGCGCGCCGAGCGTGCAATTCCAGGAGCGACGCGGCGGCGACAATGCCGCCGGAGTTGAGCTCTACTACGAGCGCCCTCCGAGCCTGGAAGACGACGAACCCGCGCAGAGGCTGCACCGCCTCTGCTTCCCCGGCCTGACGAAGCGTATTAAGCTTAGTTAG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
