| Tag |
Content |
| WERAM ID |
WERAM-Orr-0006 |
| Ensembl Protein ID |
ORUFI01G23650.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
4.70e-124 |
415.2 |
22 |
338 |
|
| Organism |
Oryza rufipogon |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae...elskelkkfnvged 91
++v+y+yd+ ++++ yg++h+m+p+r++++h+Lv +yg+ +++++++ a+a+el+ fh e y+ +l+ +p+ + + + + g d
ORUFI01G23650.1 22 RRVCYYYDPGISTVDYGEGHVMVPHRVTMAHNLVAAYGMLGDMRRLRTAPATAAELADFHDEGYLALLQDLTPDGCGgddGGHLREEGGGRGVD 115
589***********************************************************************9874322223444556788* PP
class-1.txt 92 cPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrv 185
Pvfd l++yc ++G+sl+aa++L +++adiainw+GG+hha + a GfcyvnDivlai ell +++rvly+did+hhGDgv+ af++++rv
ORUFI01G23650.1 116 NPVFDRLWDYCLRYSGGSLAAARTLGSGTADIAINWSGGMHHACRGGARGFCYVNDIVLAIRELLAHFRRVLYVDIDVHHGDGVQAAFEASNRV 209
********************************************************************************************** PP
class-1.txt 186 mtvsfhkygeeffPgtGdlsdvga.ekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecv 278
mtvsfh++g +ffPg+G + dvg+ + g+y a+nvP++ gi De+y+++f++++ +v+e+f+PeavvlqcGaDslagDrlge nl+++gha+cv
ORUFI01G23650.1 210 MTVSFHQHGGGFFPGSGAVADVGKkGPGRYCALNVPVSVGIGDEEYHRLFEPIMARVMEVFQPEAVVLQCGADSLAGDRLGELNLTTRGHAQCV 303
**********************97268******************************************************************* PP
class-1.txt 279 kfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
+f++sfnlpll+lGGGGYt++ va cw+ etav++
ORUFI01G23650.1 304 SFIRSFNLPLLLLGGGGYTINHVASCWCNETAVAI 338
********************************975 PP
|
Protein Sequence
(Fasta) | MAMAGGGGNS LPSPSCGDDK KRRVCYYYDP GISTVDYGEG HVMVPHRVTM AHNLVAAYGM 60
LGDMRRLRTA PATAAELADF HDEGYLALLQ DLTPDGCGGD DGGHLREEGG GRGVDNPVFD 120
RLWDYCLRYS GGSLAAARTL GSGTADIAIN WSGGMHHACR GGARGFCYVN DIVLAIRELL 180
AHFRRVLYVD IDVHHGDGVQ AAFEASNRVM TVSFHQHGGG FFPGSGAVAD VGKKGPGRYC 240
ALNVPVSVGI GDEEYHRLFE PIMARVMEVF QPEAVVLQCG ADSLAGDRLG ELNLTTRGHA 300
QCVSFIRSFN LPLLLLGGGG YTINHVASCW CNETAVAIGK EIPNDIPKHG FDVFYKNQEY 360
KLHYKLETKH LHRNRNTANS IDGIRMAAME NLSKLKLEAA ASVQFEERRH RSINVGDLYY 420
DPREQEEEEE SPTARLHRKL YFEPTGDQES LYTKHRCNVQ PGESSSRKQR KLK 473Protein Fasta Sequence
>ORUFI01G23650.1|Class-I|Oryza rufipogon
MAMAGGGGNSLPSPSCGDDKKRRVCYYYDPGISTVDYGEGHVMVPHRVTMAHNLVAAYGMLGDMRRLRTAPATAAELADFHDEGYLALLQDLTPDGCGGDDGGHLREEGGGRGVDNPVFDRLWDYCLRYSGGSLAAARTLGSGTADIAINWSGGMHHACRGGARGFCYVNDIVLAIRELLAHFRRVLYVDIDVHHGDGVQAAFEASNRVMTVSFHQHGGGFFPGSGAVADVGKKGPGRYCALNVPVSVGIGDEEYHRLFEPIMARVMEVFQPEAVVLQCGADSLAGDRLGELNLTTRGHAQCVSFIRSFNLPLLLLGGGGYTINHVASCWCNETAVAIGKEIPNDIPKHGFDVFYKNQEYKLHYKLETKHLHRNRNTANSIDGIRMAAMENLSKLKLEAAASVQFEERRHRSINVGDLYYDPREQEEEEESPTARLHRKLYFEPTGDQESLYTKHRCNVQPGESSSRKQRKLK |
Nucleotide Sequence
(Fasta) | ATGGCCATGG CCGGCGGCGG CGGCAATTCG CTGCCTTCGC CGTCGTGCGG CGACGACAAG 60
AAGCGGCGGG TGTGCTACTA CTACGACCCG GGGATCTCCA CCGTCGACTA CGGCGAGGGC 120
CACGTCATGG TGCCGCACCG CGTCACCATG GCGCACAACC TCGTCGCCGC CTACGGCATG 180
CTCGGCGACA TGCGCCGCCT CCGCACGGCG CCCGCCACGG CGGCGGAGCT CGCCGACTTC 240
CACGACGAGG GCTACCTCGC CCTCCTCCAG GACCTCACCC CGGACGGCTG CGGAGGCGAC 300
GACGGGGGGC ATCTACGGGA GGAGGGCGGC GGCCGCGGCG TCGACAACCC GGTGTTCGAC 360
CGCCTCTGGG ATTACTGCCT CCGCTACTCC GGCGGGTCGC TCGCCGCGGC GCGCACCCTC 420
GGGAGCGGCA CCGCCGACAT CGCCATCAAC TGGTCGGGCG GGATGCACCA CGCGTGCCGC 480
GGCGGCGCGA GGGGCTTCTG CTACGTGAAC GACATCGTGC TCGCCATCCG CGAGCTGCTC 540
GCCCACTTCC GCCGCGTGCT CTACGTGGAC ATCGACGTCC ACCACGGCGA CGGCGTCCAG 600
GCCGCCTTCG AGGCGTCGAA CCGGGTGATG ACGGTGTCGT TCCACCAGCA CGGCGGCGGC 660
TTCTTCCCGG GCTCCGGCGC CGTCGCCGAC GTCGGCAAGA AGGGCCCCGG CCGCTACTGC 720
GCGCTGAACG TGCCGGTGAG CGTGGGCATC GGCGACGAGG AGTACCACCG GCTGTTCGAG 780
CCGATCATGG CGAGGGTGAT GGAGGTGTTC CAGCCGGAGG CCGTCGTGCT GCAGTGCGGC 840
GCCGACTCCC TCGCCGGCGA CCGGCTCGGC GAGCTGAACC TGACCACGCG CGGCCACGCC 900
CAGTGCGTCA GCTTCATCCG CAGCTTCAAC CTGCCGCTCC TCCTCCTCGG CGGCGGCGGC 960
TACACCATCA ACCACGTCGC CTCCTGCTGG TGCAATGAGA CGGCGGTGGC CATCGGCAAG 1020
GAGATCCCCA ACGACATACC CAAGCATGGT TTCGACGTGT TCTACAAGAA CCAGGAGTAC 1080
AAGCTCCACT ACAAGTTGGA GACGAAGCAC CTGCACCGCA ACCGCAACAC GGCGAACTCC 1140
ATAGACGGCA TCAGGATGGC GGCCATGGAG AACCTCTCCA AACTGAAGCT GGAGGCGGCG 1200
GCGAGCGTGC AGTTCGAGGA GCGCCGCCAC CGGAGCATCA ACGTCGGCGA CCTCTACTAC 1260
GACCCACGCG AGCAGGAAGA GGAAGAGGAG AGCCCCACGG CGAGGCTGCA CCGGAAGCTC 1320
TACTTCGAGC CCACCGGAGA TCAGGAGAGC CTCTACACTA AGCACAGGTG CAACGTGCAG 1380
CCAGGGGAGT CGAGTAGTAG AAAGCAGCGT AAGCTAAAGT GA
1423Nucleotide Fasta Sequence
>ORUFI01G23650.1|Class-I|Oryza rufipogon
ATGGCCATGGCCGGCGGCGGCGGCAATTCGCTGCCTTCGCCGTCGTGCGGCGACGACAAGAAGCGGCGGGTGTGCTACTACTACGACCCGGGGATCTCCACCGTCGACTACGGCGAGGGCCACGTCATGGTGCCGCACCGCGTCACCATGGCGCACAACCTCGTCGCCGCCTACGGCATGCTCGGCGACATGCGCCGCCTCCGCACGGCGCCCGCCACGGCGGCGGAGCTCGCCGACTTCCACGACGAGGGCTACCTCGCCCTCCTCCAGGACCTCACCCCGGACGGCTGCGGAGGCGACGACGGGGGGCATCTACGGGAGGAGGGCGGCGGCCGCGGCGTCGACAACCCGGTGTTCGACCGCCTCTGGGATTACTGCCTCCGCTACTCCGGCGGGTCGCTCGCCGCGGCGCGCACCCTCGGGAGCGGCACCGCCGACATCGCCATCAACTGGTCGGGCGGGATGCACCACGCGTGCCGCGGCGGCGCGAGGGGCTTCTGCTACGTGAACGACATCGTGCTCGCCATCCGCGAGCTGCTCGCCCACTTCCGCCGCGTGCTCTACGTGGACATCGACGTCCACCACGGCGACGGCGTCCAGGCCGCCTTCGAGGCGTCGAACCGGGTGATGACGGTGTCGTTCCACCAGCACGGCGGCGGCTTCTTCCCGGGCTCCGGCGCCGTCGCCGACGTCGGCAAGAAGGGCCCCGGCCGCTACTGCGCGCTGAACGTGCCGGTGAGCGTGGGCATCGGCGACGAGGAGTACCACCGGCTGTTCGAGCCGATCATGGCGAGGGTGATGGAGGTGTTCCAGCCGGAGGCCGTCGTGCTGCAGTGCGGCGCCGACTCCCTCGCCGGCGACCGGCTCGGCGAGCTGAACCTGACCACGCGCGGCCACGCCCAGTGCGTCAGCTTCATCCGCAGCTTCAACCTGCCGCTCCTCCTCCTCGGCGGCGGCGGCTACACCATCAACCACGTCGCCTCCTGCTGGTGCAATGAGACGGCGGTGGCCATCGGCAAGGAGATCCCCAACGACATACCCAAGCATGGTTTCGACGTGTTCTACAAGAACCAGGAGTACAAGCTCCACTACAAGTTGGAGACGAAGCACCTGCACCGCAACCGCAACACGGCGAACTCCATAGACGGCATCAGGATGGCGGCCATGGAGAACCTCTCCAAACTGAAGCTGGAGGCGGCGGCGAGCGTGCAGTTCGAGGAGCGCCGCCACCGGAGCATCAACGTCGGCGACCTCTACTACGACCCACGCGAGCAGGAAGAGGAAGAGGAGAGCCCCACGGCGAGGCTGCACCGGAAGCTCTACTTCGAGCCCACCGGAGATCAGGAGAGCCTCTACACTAAGCACAGGTGCAACGTGCAGCCAGGGGAGTCGAGTAGTAGAAAGCAGCGTAAGCTAAAGTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
