WERAM Information

Tag Content
WERAM ID WERAM-Orbr-0007
Ensembl Protein ID OB01G30550.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OB01G30550 OB01G30550.1 OB01G30550.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 7.00e-95 318.8 21 309
Organism Oryza brachyantha
Domain Profile
  HDAC Class-I
   class-1.txt  1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae 77
                  ++v+y+yd+ ++++ yg++h+m+p r++++h+Lv +ygl  +++++++  a+ +e++++h   y+ +l+  +p+   
  OB01G30550.1 21 RRVCYYYDPGISTVDYGDGHVMVPYRVTMAHDLVAAYGLLGDMRRLRTAPATEAEIAEVHDGGYVALLRGLTPDGYL 97
                  589*******************************************************************9999765 PP
   class-1.txt 140 sGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifks 236
                    GfcyvnDiv+ai ell +++rvly+did+hhGDgve+af++++rvmtvsfh+yg++ffP +G++ dvg++ g y ++nvPlk gi D++y+++f++
  OB01G30550.1 132 DGFCYVNDIVIAIRELLGHFRRVLYVDIDVHHGDGVEKAFEASNRVMTVSFHQYGDKFFPRSGNVADVGTKPGEYCTLNVPLKPGIGDDEYHRLFEP 228
                   59*********************************************************************************************** PP
   class-1.txt 237 viskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllv....lGGGGYtlrnvaRcwtyetavvl 313
                   ++ +v+e+f+PeavvlqcGaDslagDrlg  +l+++gha+cv+f++sfnlpll+     GGGGYt++ va cw+ etav++
  OB01G30550.1 229 IMARVMEVFQPEAVVLQCGADSLAGDRLGDLSLTLHGHARCVSFIRSFNLPLLLggggFGGGGYTINHVASCWCNETAVAI 309
                   *****************************************************944445679****************975 PP
Protein Sequence
(Fasta)		MAMAGGGNSL PSASCGDDKK RRVCYYYDPG ISTVDYGDGH VMVPYRVTMA HDLVAAYGLL 60
GDMRRLRTAP ATEAEIAEVH DGGYVALLRG LTPDGYLRDD GGVRDRAFRC GIGVAGRHGE 120
GADNPVFDRL WDGFCYVNDI VIAIRELLGH FRRVLYVDID VHHGDGVEKA FEASNRVMTV 180
SFHQYGDKFF PRSGNVADVG TKPGEYCTLN VPLKPGIGDD EYHRLFEPIM ARVMEVFQPE 240
AVVLQCGADS LAGDRLGDLS LTLHGHARCV SFIRSFNLPL LLGGGGFGGG GYTINHVASC 300
WCNETAVAIG KDIPNDIPEH GTDRFYENQR YQLHYTMSTS RKNCNTARSI DEMRQKALEN 360
LSKLRLEAAA GVPFEERGGR STDADALYER SDEEEEERPS QRLHRLCFLE RADRRRRREP 420
HPHGEVPSQA QAHDTERRSR KLRKAK 446
Nucleotide Sequence
(Fasta)		ATGGCGATGG CCGGCGGCGG GAACTCGCTG CCGTCGGCGT CGTGCGGCGA CGACAAGAAG 60
CGGCGCGTGT GCTACTACTA CGACCCGGGC ATCTCCACCG TCGACTACGG CGACGGGCAC 120
GTCATGGTGC CGTACCGCGT CACCATGGCG CACGACCTCG TCGCCGCCTA CGGCCTGCTC 180
GGCGACATGC GCCGCCTCCG CACGGCGCCG GCCACCGAGG CGGAGATCGC CGAGGTCCAC 240
GACGGGGGCT ACGTCGCGCT CCTCCGCGGC CTCACCCCGG ACGGCTACCT CCGCGACGAC 300
GGCGGCGTCC GCGACAGGGC CTTTCGCTGC GGCATCGGCG TCGCCGGCAG ACACGGCGAG 360
GGCGCCGACA ACCCCGTGTT CGACCGCCTC TGGGACGGCT TCTGCTACGT GAACGACATC 420
GTGATCGCCA TCCGCGAGCT GCTCGGCCAC TTCCGCCGCG TGCTCTACGT GGACATCGAC 480
GTCCACCACG GCGACGGCGT CGAGAAGGCC TTCGAGGCGT CGAACCGGGT GATGACGGTG 540
TCGTTCCACC AGTACGGCGA CAAGTTCTTC CCGCGGTCCG GCAATGTCGC CGACGTCGGC 600
ACCAAGCCCG GCGAGTACTG CACCCTGAAC GTGCCGCTGA AGCCGGGCAT CGGCGACGAC 660
GAGTACCACC GCCTGTTCGA GCCGATCATG GCCAGGGTGA TGGAGGTGTT CCAGCCGGAG 720
GCCGTCGTGC TGCAGTGCGG CGCGGACTCT CTCGCCGGCG ACCGGCTTGG TGACCTGAGC 780
CTGACCCTGC ACGGCCACGC CCGCTGCGTC AGCTTCATCC GCAGCTTCAA CCTGCCGCTC 840
CTCCTCGGCG GCGGGGGGTT CGGCGGCGGT GGTTACACCA TCAACCACGT CGCCTCCTGC 900
TGGTGCAACG AGACGGCGGT GGCCATCGGC AAGGACATCC CCAACGACAT ACCGGAGCAC 960
GGCACCGACC GCTTCTACGA GAACCAGCGG TACCAGCTCC ACTACACGAT GTCCACTTCG 1020
CGCAAGAACT GCAACACGGC CAGGTCCATA GACGAAATGA GGCAGAAGGC CCTGGAGAAC 1080
CTCTCCAAGC TGAGGCTGGA GGCGGCGGCG GGCGTGCCGT TCGAGGAGCG CGGCGGCCGG 1140
AGCACCGACG CCGACGCGCT CTACGAGCGG AGCGACGAGG AGGAAGAGGA GCGCCCCTCG 1200
CAGAGGCTGC ACCGGCTCTG CTTCCTAGAA AGAGCCGATC GGCGACGACG ACGAGAGCCC 1260
CACCCCCATG GAGAGGTGCC AAGCCAAGCA CAGGCACACG ACACCGAGCG GCGCAGCAGA 1320
AAGCTGCGAA AGGCCAAGTG A 1342
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orp-0006 OPUNC01G21000.1 Oryza punctata 68 2e-161 566
WERAM-Orm-0006 OMERI01G19130.1 Oryza meridionalis 63 3e-159 558
WERAM-Orgl-0006 OGLUM01G24610.1 Oryza glumaepatula 64 4e-157 551
WERAM-Orr-0006 ORUFI01G23650.1 Oryza rufipogon 63 1e-156 550
WERAM-Orb-0005 OBART01G20930.1 Oryza barthii 67 1e-155 546
WERAM-Orni-0005 ONIVA01G23540.1 Oryza nivara 64 2e-155 546
WERAM-Lep-0007 LPERR01G17850.1 Leersia perrieri 60 5e-143 504
WERAM-Ori-0005 BGIOSGA001330-PA Oryza indica 69 2e-120 429
WERAM-Ors-0100 OS11T0200000-01 Oryza sativa 52 3e-115 412
WERAM-Orl-0006 KN538683.1_FGP175 Oryza longistaminata 51 7e-115 411
WERAM-Brd-0084 BRADI3G44780.1 Brachypodium distachyon 49 2e-108 389
WERAM-Sob-0048 Sb03g026250.1 Sorghum bicolor 50 2e-107 386
WERAM-Aet-0080 EMT05969 Aegilops tauschii 55 2e-101 366
WERAM-Sei-0017 Si004835m Setaria italica 47 4e-95 345
WERAM-Tra-0253 Traes_6AS_5CF7CCD9E.1 Triticum aestivum 46 2e-89 327
WERAM-Hov-0099 MLOC_71091.1 Hordeum vulgare 46 3e-88 323
WERAM-Zem-0099 GRMZM2G172883_P01 Zea mays 45 5e-88 322
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 46 1e-87 320
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 46 2e-87 320
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 46 3e-87 320
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 46 3e-87 319
WERAM-Amt-0016 ERM94967 Amborella trichopoda 45 4e-87 319
WERAM-Glm-0012 GLYMA01G45660.3 Glycine max 45 5e-87 318
WERAM-Met-0119 KEH27301 Medicago truncatula 45 7e-87 318
WERAM-Pot-0112 POPTR_0009s17200.1 Populus trichocarpa 44 1e-86 317
WERAM-Viv-0012 VIT_03s0038g04240.t01 Vitis vinifera 45 2e-86 316
WERAM-Thc-0026 EOX98961 Theobroma cacao 45 1e-85 314
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 45 2e-85 313
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 45 6e-85 312
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 45 1e-84 311
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 44 3e-84 310
WERAM-Prp-0056 EMJ02177 Prunus persica 44 3e-84 309
WERAM-Mua-0081 GSMUA_Achr5P06320_001 Musa acuminata 46 3e-81 299
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 43 5e-81 299
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 42 1e-79 294
WERAM-Orn-0136 ENSONIP00000014285.1 Oreochromis niloticus 43 2e-79 293
WERAM-Xim-0061 ENSXMAP00000005239.1 Xiphophorus maculatus 43 5e-79 292
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 42 5e-79 292
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 43 6e-79 292
WERAM-Ten-0060 ENSTNIP00000007837.1 Tetraodon nigroviridis 42 2e-78 290
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 42 2e-78 290
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 42 3e-78 290
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 42 4e-78 289
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 42 4e-78 289
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 42 5e-78 289
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 42 5e-78 288
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 42 5e-78 288
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 42 6e-78 288
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 42 7e-78 288
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 43 9e-78 288
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 42 1e-77 288
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 42 1e-77 287
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 42 1e-77 287
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 42 1e-77 287
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 42 1e-77 287
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 42 1e-77 287
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 42 1e-77 287
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 42 2e-77 287
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 42 2e-77 287
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 42 2e-77 286
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 40 2e-77 286
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 43 2e-77 286
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 40 3e-77 286
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 42 3e-77 286
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 40 3e-77 286
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 40 3e-77 286
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 40 3e-77 286
WERAM-Chs-0191 ENSCSAP00000011772.1 Chlorocebus sabaeus 40 3e-77 286
WERAM-Sus-0028 ENSSSCP00000004781.2 Sus scrofa 40 3e-77 286
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 42 4e-77 286
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 42 5e-77 285
WERAM-Poa-0153 ENSPPYP00000018964.2 Pongo abelii 40 5e-77 285
WERAM-Pat-0155 ENSPTRP00000049696.3 Pan troglodytes 40 6e-77 285
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 42 6e-77 285
WERAM-Aim-0151 ENSAMEP00000013919.1 Ailuropoda melanoleuca 40 7e-77 285
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 42 3e-76 283
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 41 5e-75 279
WERAM-Cae-0007 R06C1.1.2 Caenorhabditis elegans 41 5e-75 279
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 40 2e-74 276
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 40 4e-74 276
WERAM-Mel-0028 EGG09787 Melampsora laricipopulina 44 9e-74 275
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 41 2e-73 273
WERAM-Fec-0156 ENSFCAP00000015379.2 Felis catus 39 3e-73 273
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 39 5e-73 272
WERAM-Dio-0132 ENSDORP00000012520.1 Dipodomys ordii 40 7e-73 271
WERAM-Anp-0059 ENSAPLP00000006605.1 Anas platyrhynchos 39 9e-73 271
WERAM-Lab-0002 EDR16061 Laccaria bicolor 43 1e-72 271
WERAM-Pug-0005 EFP76878 Puccinia graminis 43 3e-72 270
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 41 3e-72 270
WERAM-Mam-0073 ENSMMUP00000011716.2 Macaca mulatta 39 3e-72 269
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 40 4e-72 269
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 40 4e-72 269
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 41 7e-72 268
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 41 1e-71 268
WERAM-Scp-0016 SPAC3G9.07c.1:pep Schizosaccharomyces pombe 40 2e-71 266
WERAM-Chr-0001 EDP02188 Chlamydomonas reinhardtii 40 2e-71 266
WERAM-Coi-0024 EAS33504 Coccidioides immitis 42 4e-71 266
WERAM-Crn-0023 AAW44291 Cryptococcus neoformans 42 4e-71 266
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 40 8e-71 265
Created Date 25-Jun-2016