| Tag |
Content |
| WERAM ID |
WERAM-Sob-0048 |
| Ensembl Protein ID |
Sb03g026250.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
9.40e-119 |
397.4 |
20 |
344 |
|
| Organism |
Sorghum bicolor |
| Domain Profile |
HDAC Class-I
class-1.txt 2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeell.kfhseeyieflkkvepenae...elskelkkfnvge... 90
+v+y+yd ++++ yg++h+m+p+r+ ++h Lv +ygl +++++++++ a+++e++ fh+ +y+++l++ +pe+ +++ k +n+g
Sb03g026250.1 20 EVCYYYDAGIASVDYGEDHSMVPRRVDMAHALVRSYGLLHDMRRLRTRPATVTEITgDFHEPDYVRLLQNLTPESFYaggATMSAAKAHNIGVlke 115
79***************************************************99757****************9876665556777788774444 PP
class-1.txt 91 .....dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyt 181
d P + gl++ycq ++G+sl+aa+ L +++adiainw+GG+hha k asGfc+vnDivlai +ll++++rvly+did+hhGDgve af
Sb03g026250.1 116 getfyDNPPIAGLWDYCQRYAGGSLAAARALGEGKADIAINWSGGMHHACKAAASGFCFVNDIVLAIKDLLHHFRRVLYVDIDVHHGDGVETAFLD 211
5566699***************************************************************************************** PP
class-1.txt 182 tdrvmtvsfhkygeeffPg.tGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae 276
++rvmtvsfh+ ++ffP G+++ vg++ g y a+nvP+ +g+ De y ++fk ++++v+++f+Pea+v+qcG+Dsl+gDrlg+ nlsi gha+
Sb03g026250.1 212 SNRVMTVSFHQRTKNFFPEeRGHVNHVGEGAGLYRALNVPFMEGVGDEGYCEMFKAIMKRVVDVFQPEAIVMQCGSDSLSGDRLGQLNLSIAGHAQ 307
******************737*************************************************************************** PP
class-1.txt 277 cvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
cv++++sfnlpll+lGGGGYt++ va cw+yetav++
Sb03g026250.1 308 CVSYMRSFNLPLLLLGGGGYTVNHVAACWCYETAVAI 344
**********************************975 PP
|
Protein Sequence
(Fasta) | MDTSGNSLPS PSCPDGKKRE VCYYYDAGIA SVDYGEDHSM VPRRVDMAHA LVRSYGLLHD 60
MRRLRTRPAT VTEITGDFHE PDYVRLLQNL TPESFYAGGA TMSAAKAHNI GVLKEGETFY 120
DNPPIAGLWD YCQRYAGGSL AAARALGEGK ADIAINWSGG MHHACKAAAS GFCFVNDIVL 180
AIKDLLHHFR RVLYVDIDVH HGDGVETAFL DSNRVMTVSF HQRTKNFFPE ERGHVNHVGE 240
GAGLYRALNV PFMEGVGDEG YCEMFKAIMK RVVDVFQPEA IVMQCGSDSL SGDRLGQLNL 300
SIAGHAQCVS YMRSFNLPLL LLGGGGYTVN HVAACWCYET AVAIGKEIDD NIPVHCYDTY 360
YSGQGYKLHY PVDKQLKNEN KRSYLERTMT AVLENLSHLE AAPSVQFQDP PGPGGSGSTN 420
TEPLFYEQAP REDDDPMERL HRLCGERDER CFFRELGKKR QVAKDRENGG HHQTSRPEPV 480
KKYRHEKFHF KC 492Protein Fasta Sequence
>Sb03g026250.1|Class-I|Sorghum bicolor
MDTSGNSLPSPSCPDGKKREVCYYYDAGIASVDYGEDHSMVPRRVDMAHALVRSYGLLHDMRRLRTRPATVTEITGDFHEPDYVRLLQNLTPESFYAGGATMSAAKAHNIGVLKEGETFYDNPPIAGLWDYCQRYAGGSLAAARALGEGKADIAINWSGGMHHACKAAASGFCFVNDIVLAIKDLLHHFRRVLYVDIDVHHGDGVETAFLDSNRVMTVSFHQRTKNFFPEERGHVNHVGEGAGLYRALNVPFMEGVGDEGYCEMFKAIMKRVVDVFQPEAIVMQCGSDSLSGDRLGQLNLSIAGHAQCVSYMRSFNLPLLLLGGGGYTVNHVAACWCYETAVAIGKEIDDNIPVHCYDTYYSGQGYKLHYPVDKQLKNENKRSYLERTMTAVLENLSHLEAAPSVQFQDPPGPGGSGSTNTEPLFYEQAPREDDDPMERLHRLCGERDERCFFRELGKKRQVAKDRENGGHHQTSRPEPVKKYRHEKFHFKC |
Nucleotide Sequence
(Fasta) | ATGGACACGA GCGGCAACTC GCTGCCGTCC CCGTCGTGCC CCGACGGCAA GAAGCGGGAG 60
GTGTGCTACT ACTACGACGC CGGCATCGCC AGCGTCGACT ACGGCGAGGA CCACAGCATG 120
GTGCCCCGCC GAGTCGACAT GGCGCACGCG CTCGTCCGCT CCTACGGCCT GCTCCACGAC 180
ATGAGGCGTC TTCGCACGAG GCCCGCCACC GTCACGGAGA TTACCGGAGA CTTTCATGAG 240
CCCGACTACG TTCGTTTGCT GCAGAACCTC ACCCCGGAGA GCTTCTACGC CGGCGGCGCC 300
ACCATGAGCG CAGCGAAGGC GCACAATATA GGCGTGCTCA AGGAAGGCGA GACTTTCTAC 360
GACAACCCTC CCATCGCCGG CCTCTGGGAC TACTGCCAGC GCTACGCCGG CGGGTCGCTG 420
GCCGCGGCGC GCGCGCTCGG CGAAGGCAAA GCCGACATCG CCATCAACTG GTCCGGCGGC 480
ATGCACCACG CGTGCAAAGC GGCGGCCAGC GGCTTCTGCT TCGTCAACGA CATCGTGCTC 540
GCCATCAAGG ACCTCCTCCA CCACTTCAGG CGCGTGCTGT ACGTCGACAT CGACGTCCAC 600
CACGGCGACG GCGTCGAGAC GGCCTTCCTC GACTCCAACC GTGTGATGAC AGTGTCGTTC 660
CACCAGCGCA CCAAGAATTT CTTCCCGGAG GAAAGGGGAC ACGTCAACCA CGTCGGCGAA 720
GGGGCCGGTC TGTACCGTGC TTTGAACGTG CCGTTCATGG AGGGCGTCGG CGACGAGGGG 780
TACTGCGAGA TGTTCAAGGC CATCATGAAA AGGGTCGTCG ACGTGTTCCA GCCGGAGGCC 840
ATCGTGATGC AGTGCGGCAG CGACTCGCTC TCCGGCGACA GGCTCGGCCA GCTTAACCTG 900
TCCATCGCCG GCCACGCCCA GTGCGTCAGC TACATGCGGA GCTTCAACTT GCCGCTGCTC 960
CTTCTCGGCG GCGGCGGATA CACCGTCAAC CACGTCGCCG CCTGCTGGTG CTACGAGACG 1020
GCGGTGGCCA TCGGCAAGGA GATCGACGAC AACATACCGG TGCACTGCTA CGACACCTAC 1080
TACAGTGGCC AAGGCTACAA GCTCCATTAC CCGGTGGACA AGCAACTCAA GAACGAAAAC 1140
AAGAGAAGCT ACCTAGAACG CACGATGACC GCGGTCCTAG AGAACCTCTC CCATCTCGAG 1200
GCGGCGCCGA GCGTGCAGTT CCAGGATCCG CCCGGGCCCG GCGGAAGCGG AAGCACCAAT 1260
ACCGAGCCGC TATTCTACGA ACAGGCCCCG CGAGAAGACG ACGACCCCAT GGAGAGGCTG 1320
CATCGGCTTT GTGGCGAGAG GGACGAGCGC TGCTTCTTCA GAGAGTTGGG AAAGAAGCGA 1380
CAGGTAGCCA AGGATAGAGA AAATGGCGGT CATCACCAAA CGTCTCGGCC CGAACCGGTC 1440
AAAAAGTACC GACACGAAAA GTTCCATTTT AAATGTTGA
Nucleotide Fasta Sequence
>Sb03g026250.1|Class-I|Sorghum bicolor
ATGGACACGAGCGGCAACTCGCTGCCGTCCCCGTCGTGCCCCGACGGCAAGAAGCGGGAGGTGTGCTACTACTACGACGCCGGCATCGCCAGCGTCGACTACGGCGAGGACCACAGCATGGTGCCCCGCCGAGTCGACATGGCGCACGCGCTCGTCCGCTCCTACGGCCTGCTCCACGACATGAGGCGTCTTCGCACGAGGCCCGCCACCGTCACGGAGATTACCGGAGACTTTCATGAGCCCGACTACGTTCGTTTGCTGCAGAACCTCACCCCGGAGAGCTTCTACGCCGGCGGCGCCACCATGAGCGCAGCGAAGGCGCACAATATAGGCGTGCTCAAGGAAGGCGAGACTTTCTACGACAACCCTCCCATCGCCGGCCTCTGGGACTACTGCCAGCGCTACGCCGGCGGGTCGCTGGCCGCGGCGCGCGCGCTCGGCGAAGGCAAAGCCGACATCGCCATCAACTGGTCCGGCGGCATGCACCACGCGTGCAAAGCGGCGGCCAGCGGCTTCTGCTTCGTCAACGACATCGTGCTCGCCATCAAGGACCTCCTCCACCACTTCAGGCGCGTGCTGTACGTCGACATCGACGTCCACCACGGCGACGGCGTCGAGACGGCCTTCCTCGACTCCAACCGTGTGATGACAGTGTCGTTCCACCAGCGCACCAAGAATTTCTTCCCGGAGGAAAGGGGACACGTCAACCACGTCGGCGAAGGGGCCGGTCTGTACCGTGCTTTGAACGTGCCGTTCATGGAGGGCGTCGGCGACGAGGGGTACTGCGAGATGTTCAAGGCCATCATGAAAAGGGTCGTCGACGTGTTCCAGCCGGAGGCCATCGTGATGCAGTGCGGCAGCGACTCGCTCTCCGGCGACAGGCTCGGCCAGCTTAACCTGTCCATCGCCGGCCACGCCCAGTGCGTCAGCTACATGCGGAGCTTCAACTTGCCGCTGCTCCTTCTCGGCGGCGGCGGATACACCGTCAACCACGTCGCCGCCTGCTGGTGCTACGAGACGGCGGTGGCCATCGGCAAGGAGATCGACGACAACATACCGGTGCACTGCTACGACACCTACTACAGTGGCCAAGGCTACAAGCTCCATTACCCGGTGGACAAGCAACTCAAGAACGAAAACAAGAGAAGCTACCTAGAACGCACGATGACCGCGGTCCTAGAGAACCTCTCCCATCTCGAGGCGGCGCCGAGCGTGCAGTTCCAGGATCCGCCCGGGCCCGGCGGAAGCGGAAGCACCAATACCGAGCCGCTATTCTACGAACAGGCCCCGCGAGAAGACGACGACCCCATGGAGAGGCTGCATCGGCTTTGTGGCGAGAGGGACGAGCGCTGCTTCTTCAGAGAGTTGGGAAAGAAGCGACAGGTAGCCAAGGATAGAGAAAATGGCGGTCATCACCAAACGTCTCGGCCCGAACCGGTCAAAAAGTACCGACACGAAAAGTTCCATTTTAAATGTTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
