| Tag |
Content |
| WERAM ID |
WERAM-Mua-0033 |
| Ensembl Protein ID |
GSMUA_Achr1P14440_001 |
| Gene Name |
HDAC19 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
2.40e-135 |
451.9 |
23 |
302 |
|
| Organism |
Musa acuminata |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkle 44
+kv+y+y++++g+++yg++hpmkp+r+++th L+ +ygl ++++
GSMUA_Achr1P14440_001 23 RKVCYFYHPTMGNFYYGNGHPMKPHRVRMTHALLEKYGLLRHMR 66
589***************************************97 PP
class-1.txt 82 elkkfnvge.dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyidid 168
+l++fn++ +cP+f+gl+++cql++Gas++aa+++n ++ di+inw+GGlhhakks asGfcyvnD+vlail ll + +rvly+did
GSMUA_Achr1P14440_001 71 TLRRFNIDGvECPIFHGLYKFCQLYAGASISAARQINLDHYDIVINWSGGLHHAKKSIASGFCYVNDVVLAILSLLETRDRVLYVDID 158
6899***766****************************************************************************** PP
class-1.txt 169 lhhGDgveeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGa 256
+hhGDgveeafyttdrvmtvsfhk+g +fPgtG+++d+g++ gkyyavnvPl+dgidDesy +fk+v+ k +e+f+P+a+vlqcGa
GSMUA_Achr1P14440_001 159 IHHGDGVEEAFYTTDRVMTVSFHKFGG-YFPGTGHIDDIGCDGGKYYAVNVPLDDGIDDESYLYVFKPVVAKAMEVFRPNAIVLQCGA 245
**************************9.************************************************************ PP
class-1.txt 257 DslagDrlgefnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
Dsl+gDrlg+fnls++gh+ecvk+++sfn+pl++lGGGGYtl+nvaRcw+yet+v+l
GSMUA_Achr1P14440_001 246 DSLSGDRLGCFNLSVRGHGECVKYMRSFNVPLMLLGGGGYTLHNVARCWCYETGVAL 302
******************************************************986 PP
|
Protein Sequence
(Fasta) | MDVAGTSGGG SSLPSVGTDA TKRKVCYFYH PTMGNFYYGN GHPMKPHRVR MTHALLEKYG 60
LLRHMRNDPA TLRRFNIDGV ECPIFHGLYK FCQLYAGASI SAARQINLDH YDIVINWSGG 120
LHHAKKSIAS GFCYVNDVVL AILSLLETRD RVLYVDIDIH HGDGVEEAFY TTDRVMTVSF 180
HKFGGYFPGT GHIDDIGCDG GKYYAVNVPL DDGIDDESYL YVFKPVVAKA MEVFRPNAIV 240
LQCGADSLSG DRLGCFNLSV RGHGECVKYM RSFNVPLMLL GGGGYTLHNV ARCWCYETGV 300
ALGIEVNNKI PDHQYSEYFA PLYRIHLPTT NMTNKNSRKS LDDTIAKVLA NLSKLQAAPS 360
VQFKERSSPM DLAEVLTTMP SFVTSLSRNV DYFMLKSYTL QYLIAFDFRH TITGTK 416Protein Fasta Sequence
>GSMUA_Achr1P14440_001|Class-I|Musa acuminata
MDVAGTSGGGSSLPSVGTDATKRKVCYFYHPTMGNFYYGNGHPMKPHRVRMTHALLEKYGLLRHMRNDPATLRRFNIDGVECPIFHGLYKFCQLYAGASISAARQINLDHYDIVINWSGGLHHAKKSIASGFCYVNDVVLAILSLLETRDRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGGYFPGTGHIDDIGCDGGKYYAVNVPLDDGIDDESYLYVFKPVVAKAMEVFRPNAIVLQCGADSLSGDRLGCFNLSVRGHGECVKYMRSFNVPLMLLGGGGYTLHNVARCWCYETGVALGIEVNNKIPDHQYSEYFAPLYRIHLPTTNMTNKNSRKSLDDTIAKVLANLSKLQAAPSVQFKERSSPMDLAEVLTTMPSFVTSLSRNVDYFMLKSYTLQYLIAFDFRHTITGTK |
Nucleotide Sequence
(Fasta) | ATGGACGTGG CCGGCACCAG CGGAGGCGGT AGCTCGCTGC CGTCGGTGGG GACGGACGCA 60
ACGAAGCGGA AGGTGTGCTA CTTCTACCAC CCGACGATGG GCAACTTCTA CTACGGAAAT 120
GGACACCCGA TGAAGCCCCA CCGGGTGCGG ATGACACATG CCCTCCTTGA GAAGTACGGG 180
CTCCTTAGGC ACATGCGTAA CGACCCGGCC ACCTTACGCC GCTTCAACAT CGACGGCGTC 240
GAGTGCCCCA TCTTCCATGG CCTCTACAAG TTCTGCCAGC TCTACGCCGG CGCCTCCATC 300
AGCGCCGCCA GGCAGATCAA CCTCGACCAC TACGACATAG TCATCAACTG GTCCGGCGGC 360
CTTCACCACG CCAAGAAGAG CATCGCCTCG GGCTTCTGCT ACGTCAATGA TGTCGTCCTC 420
GCCATCCTTA GTCTCCTCGA GACCCGCGAC CGTGTTCTCT ACGTGGACAT TGATATCCAC 480
CATGGAGATG GAGTAGAGGA AGCCTTCTAC ACAACTGATA GAGTAATGAC GGTCTCATTC 540
CACAAGTTCG GAGGCTATTT TCCTGGAACT GGGCATATAG ATGATATCGG ATGTGATGGA 600
GGAAAATATT ACGCAGTGAA TGTTCCATTA GATGACGGAA TAGACGACGA GAGCTACCTC 660
TATGTCTTCA AACCTGTCGT AGCAAAAGCC ATGGAAGTCT TCAGGCCAAA CGCCATCGTC 720
CTTCAGTGCG GTGCTGACTC CTTATCTGGA GACAGGTTGG GCTGCTTCAA CCTTTCTGTG 780
CGTGGCCATG GAGAGTGTGT CAAGTATATG AGATCTTTTA ACGTGCCACT GATGCTGCTT 840
GGCGGCGGTG GCTACACCTT GCATAATGTT GCTCGCTGTT GGTGCTACGA GACCGGGGTG 900
GCCCTTGGAA TCGAGGTGAA CAATAAGATT CCTGATCACC AATACAGCGA GTATTTTGCC 960
CCACTCTACA GAATCCACCT TCCAACAACG AACATGACAA ACAAGAACTC ACGCAAGTCA 1020
TTGGATGATA CCATAGCGAA GGTACTGGCT AACCTTTCCA AGCTCCAAGC AGCCCCCAGT 1080
GTCCAATTCA AGGAACGGTC GTCTCCTATG GATCTCGCTG AGGTACTTAC TACTATGCCT 1140
TCCTTTGTTA CCAGCCTTTC TAGGAACGTC GACTACTTCA TGCTGAAATC TTACACTCTG 1200
CAGTATCTTA TCGCTTTTGA TTTTAGACAT ACTATTACTG GAACAAAGTA A
1252Nucleotide Fasta Sequence
>GSMUA_Achr1P14440_001|Class-I|Musa acuminata
ATGGACGTGGCCGGCACCAGCGGAGGCGGTAGCTCGCTGCCGTCGGTGGGGACGGACGCAACGAAGCGGAAGGTGTGCTACTTCTACCACCCGACGATGGGCAACTTCTACTACGGAAATGGACACCCGATGAAGCCCCACCGGGTGCGGATGACACATGCCCTCCTTGAGAAGTACGGGCTCCTTAGGCACATGCGTAACGACCCGGCCACCTTACGCCGCTTCAACATCGACGGCGTCGAGTGCCCCATCTTCCATGGCCTCTACAAGTTCTGCCAGCTCTACGCCGGCGCCTCCATCAGCGCCGCCAGGCAGATCAACCTCGACCACTACGACATAGTCATCAACTGGTCCGGCGGCCTTCACCACGCCAAGAAGAGCATCGCCTCGGGCTTCTGCTACGTCAATGATGTCGTCCTCGCCATCCTTAGTCTCCTCGAGACCCGCGACCGTGTTCTCTACGTGGACATTGATATCCACCATGGAGATGGAGTAGAGGAAGCCTTCTACACAACTGATAGAGTAATGACGGTCTCATTCCACAAGTTCGGAGGCTATTTTCCTGGAACTGGGCATATAGATGATATCGGATGTGATGGAGGAAAATATTACGCAGTGAATGTTCCATTAGATGACGGAATAGACGACGAGAGCTACCTCTATGTCTTCAAACCTGTCGTAGCAAAAGCCATGGAAGTCTTCAGGCCAAACGCCATCGTCCTTCAGTGCGGTGCTGACTCCTTATCTGGAGACAGGTTGGGCTGCTTCAACCTTTCTGTGCGTGGCCATGGAGAGTGTGTCAAGTATATGAGATCTTTTAACGTGCCACTGATGCTGCTTGGCGGCGGTGGCTACACCTTGCATAATGTTGCTCGCTGTTGGTGCTACGAGACCGGGGTGGCCCTTGGAATCGAGGTGAACAATAAGATTCCTGATCACCAATACAGCGAGTATTTTGCCCCACTCTACAGAATCCACCTTCCAACAACGAACATGACAAACAAGAACTCACGCAAGTCATTGGATGATACCATAGCGAAGGTACTGGCTAACCTTTCCAAGCTCCAAGCAGCCCCCAGTGTCCAATTCAAGGAACGGTCGTCTCCTATGGATCTCGCTGAGGTACTTACTACTATGCCTTCCTTTGTTACCAGCCTTTCTAGGAACGTCGACTACTTCATGCTGAAATCTTACACTCTGCAGTATCTTATCGCTTTTGATTTTAGACATACTATTACTGGAACAAAGTAA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
