| Tag |
Content |
| WERAM ID |
WERAM-Lep-0052 |
| Ensembl Protein ID |
LPERR05G13220.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
2.10e-119 |
399.6 |
21 |
345 |
|
| Organism |
Leersia perrieri |
| Domain Profile |
HDAC Class-I
class-1.txt 3 vayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeels...kelkkfnvge..d 91
v+y+yd+ +++++ +++h m+p r++++h+Lv +yg+ ++++++++ a+ +e+ +fhs ey+++l+ +pe+ ++ + +++g +
LPERR05G13220.1 21 VCYYYDPGIAHIKLSDEHMMVPARVAMAHSLVAAYGMLDSMRRLRTRPATESEIRRFHSPEYVDLLRDLTPESYDHGVlgrLKDDDHGLGGciE 114
89***********************************************************************995443323556778876669 PP
class-1.txt 92 cPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk....khkrvlyididlhhGDgveeafyt 181
cP fd l++yc+ ++G+sl+aa+ L +e+d+ainw+GG+hha +asGfcyvnDivlai ell ++rvly+d+d hhGDgv+eaf
LPERR05G13220.1 115 CPPFDRLWNYCRGYAGGSLAAARALAGGESDVAINWSGGMHHACAAKASGFCYVNDIVLAINELLGagagAFRRVLYVDVDAHHGDGVQEAFAD 208
****************************************************************9755557*********************** PP
class-1.txt 182 tdrvmtvsfhkyge.....effPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnls 270
+drvmt+sfh+yg+ +ffPgtG +s++g + g +y+vnvP++ g++D+ y+++fk+++sk +e+f+PeavvlqcGaDsl+gDrlg+ +ls
LPERR05G13220.1 209 SDRVMTLSFHRYGKtphggKFFPGTGLVSEIGRGAGEHYTVNVPMDAGVHDDVYQSLFKPIVSKAMEVFDPEAVVLQCGADSLSGDRLGSMELS 302
************86444447************************************************************************** PP
class-1.txt 271 ikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
++ghaecv+f++ fn pll+lGGGGYt++ va w+yetav++
LPERR05G13220.1 303 VRGHAECVSFLRGFNRPLLLLGGGGYTINHVASSWCYETAVAI 345
****************************************975 PP
|
Protein Sequence
(Fasta) | MDTGGNSLPS ASCVDGKKRC VCYYYDPGIA HIKLSDEHMM VPARVAMAHS LVAAYGMLDS 60
MRRLRTRPAT ESEIRRFHSP EYVDLLRDLT PESYDHGVLG RLKDDDHGLG GCIECPPFDR 120
LWNYCRGYAG GSLAAARALA GGESDVAINW SGGMHHACAA KASGFCYVND IVLAINELLG 180
AGAGAFRRVL YVDVDAHHGD GVQEAFADSD RVMTLSFHRY GKTPHGGKFF PGTGLVSEIG 240
RGAGEHYTVN VPMDAGVHDD VYQSLFKPIV SKAMEVFDPE AVVLQCGADS LSGDRLGSME 300
LSVRGHAECV SFLRGFNRPL LLLGGGGYTI NHVASSWCYE TAVAIGKERD LPDEIPKHGY 360
DLFYMNQGNK LHYSVSEATV NSKLLKKAAE TKQIVLEHLS QIKAVPSVQF MQRRGVDAGD 420
DLYYECAPSL EEDEPMQRLH RLCHAVGQGK RLKLK 455Protein Fasta Sequence
>LPERR05G13220.1|Class-I|Leersia perrieri
MDTGGNSLPSASCVDGKKRCVCYYYDPGIAHIKLSDEHMMVPARVAMAHSLVAAYGMLDSMRRLRTRPATESEIRRFHSPEYVDLLRDLTPESYDHGVLGRLKDDDHGLGGCIECPPFDRLWNYCRGYAGGSLAAARALAGGESDVAINWSGGMHHACAAKASGFCYVNDIVLAINELLGAGAGAFRRVLYVDVDAHHGDGVQEAFADSDRVMTLSFHRYGKTPHGGKFFPGTGLVSEIGRGAGEHYTVNVPMDAGVHDDVYQSLFKPIVSKAMEVFDPEAVVLQCGADSLSGDRLGSMELSVRGHAECVSFLRGFNRPLLLLGGGGYTINHVASSWCYETAVAIGKERDLPDEIPKHGYDLFYMNQGNKLHYSVSEATVNSKLLKKAAETKQIVLEHLSQIKAVPSVQFMQRRGVDAGDDLYYECAPSLEEDEPMQRLHRLCHAVGQGKRLKLK |
Nucleotide Sequence
(Fasta) | ATGGACACCG GTGGGAACTC GCTACCGTCG GCGTCGTGCG TCGATGGCAA GAAGCGTTGT 60
GTGTGCTACT ACTACGACCC TGGCATCGCC CACATCAAGC TGAGCGACGA GCACATGATG 120
GTGCCCGCAC GCGTCGCCAT GGCGCACAGC CTCGTCGCCG CCTACGGCAT GCTCGACAGC 180
ATGCGCCGCC TCCGCACGAG GCCCGCCACG GAGTCCGAAA TCCGCCGCTT CCACTCGCCG 240
GAGTACGTCG ACCTCCTCCG CGACCTCACG CCGGAGAGCT ACGACCATGG CGTGCTCGGC 300
CGCCTGAAGG ACGACGACCA CGGCCTCGGC GGCTGCATCG AGTGCCCCCC ATTCGACCGC 360
CTCTGGAACT ACTGCCGCGG CTACGCCGGC GGGTCTCTCG CCGCGGCGCG CGCGCTCGCC 420
GGCGGCGAGT CCGACGTCGC CATCAACTGG TCCGGCGGGA TGCACCACGC GTGCGCGGCC 480
AAGGCGAGCG GGTTCTGCTA CGTCAACGAC ATCGTGCTTG CCATCAACGA GCTCCTCGGC 540
GCCGGCGCCG GCGCCTTCCG CCGCGTGCTC TACGTCGATG TCGACGCGCA CCACGGCGAC 600
GGCGTGCAGG AGGCGTTCGC CGACTCCGAC CGCGTCATGA CACTGTCGTT CCACCGCTAC 660
GGAAAAACCC CGCACGGCGG CAAATTCTTC CCGGGCACCG GACTCGTCAG CGAGATCGGC 720
CGTGGCGCAG GGGAGCACTA CACGGTGAAC GTGCCGATGG ACGCGGGCGT GCACGACGAC 780
GTGTACCAGT CTCTGTTCAA GCCGATCGTT TCCAAGGCGA TGGAGGTGTT CGACCCGGAA 840
GCCGTCGTGC TGCAGTGCGG CGCCGACTCG CTCTCCGGCG ACCGGCTCGG CAGCATGGAG 900
CTCTCGGTGC GGGGACACGC GGAGTGCGTC AGCTTCCTCC GGGGATTCAA CCGGCCGCTG 960
CTCCTCCTCG GCGGCGGCGG CTACACAATC AACCACGTCG CATCGTCTTG GTGCTACGAG 1020
ACGGCGGTCG CCATCGGTAA GGAGAGGGAT CTCCCCGACG AGATACCCAA GCACGGTTAC 1080
GACCTCTTCT ACATGAACCA GGGGAACAAG CTCCATTACT CGGTGTCAGA AGCGACGGTG 1140
AACAGTAAGT TGCTCAAGAA GGCGGCGGAA ACGAAGCAGA TTGTCCTCGA GCACCTCTCG 1200
CAGATCAAGG CCGTGCCGAG TGTGCAGTTT ATGCAGCGGC GTGGTGTTGA CGCCGGCGAC 1260
GACCTCTACT ATGAGTGTGC TCCGAGCCTG GAAGAGGACG AACCAATGCA GAGGTTGCAC 1320
CGGCTATGTC ACGCCGTCGG TCAGGGGAAG CGCCTCAAGC TTAAGTAG
1369Nucleotide Fasta Sequence
>LPERR05G13220.1|Class-I|Leersia perrieri
ATGGACACCGGTGGGAACTCGCTACCGTCGGCGTCGTGCGTCGATGGCAAGAAGCGTTGTGTGTGCTACTACTACGACCCTGGCATCGCCCACATCAAGCTGAGCGACGAGCACATGATGGTGCCCGCACGCGTCGCCATGGCGCACAGCCTCGTCGCCGCCTACGGCATGCTCGACAGCATGCGCCGCCTCCGCACGAGGCCCGCCACGGAGTCCGAAATCCGCCGCTTCCACTCGCCGGAGTACGTCGACCTCCTCCGCGACCTCACGCCGGAGAGCTACGACCATGGCGTGCTCGGCCGCCTGAAGGACGACGACCACGGCCTCGGCGGCTGCATCGAGTGCCCCCCATTCGACCGCCTCTGGAACTACTGCCGCGGCTACGCCGGCGGGTCTCTCGCCGCGGCGCGCGCGCTCGCCGGCGGCGAGTCCGACGTCGCCATCAACTGGTCCGGCGGGATGCACCACGCGTGCGCGGCCAAGGCGAGCGGGTTCTGCTACGTCAACGACATCGTGCTTGCCATCAACGAGCTCCTCGGCGCCGGCGCCGGCGCCTTCCGCCGCGTGCTCTACGTCGATGTCGACGCGCACCACGGCGACGGCGTGCAGGAGGCGTTCGCCGACTCCGACCGCGTCATGACACTGTCGTTCCACCGCTACGGAAAAACCCCGCACGGCGGCAAATTCTTCCCGGGCACCGGACTCGTCAGCGAGATCGGCCGTGGCGCAGGGGAGCACTACACGGTGAACGTGCCGATGGACGCGGGCGTGCACGACGACGTGTACCAGTCTCTGTTCAAGCCGATCGTTTCCAAGGCGATGGAGGTGTTCGACCCGGAAGCCGTCGTGCTGCAGTGCGGCGCCGACTCGCTCTCCGGCGACCGGCTCGGCAGCATGGAGCTCTCGGTGCGGGGACACGCGGAGTGCGTCAGCTTCCTCCGGGGATTCAACCGGCCGCTGCTCCTCCTCGGCGGCGGCGGCTACACAATCAACCACGTCGCATCGTCTTGGTGCTACGAGACGGCGGTCGCCATCGGTAAGGAGAGGGATCTCCCCGACGAGATACCCAAGCACGGTTACGACCTCTTCTACATGAACCAGGGGAACAAGCTCCATTACTCGGTGTCAGAAGCGACGGTGAACAGTAAGTTGCTCAAGAAGGCGGCGGAAACGAAGCAGATTGTCCTCGAGCACCTCTCGCAGATCAAGGCCGTGCCGAGTGTGCAGTTTATGCAGCGGCGTGGTGTTGACGCCGGCGACGACCTCTACTATGAGTGTGCTCCGAGCCTGGAAGAGGACGAACCAATGCAGAGGTTGCACCGGCTATGTCACGCCGTCGGTCAGGGGAAGCGCCTCAAGCTTAAGTAG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
