| Tag |
Content |
| WERAM ID |
WERAM-Orgl-0108 |
| Ensembl Protein ID |
OGLUM11G05620.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
4.10e-122 |
408.9 |
220 |
543 |
|
| Organism |
Oryza glumaepatula |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae....els.kelkkfnvg 89
++v+y+yd+ +++++++++h+m+p r++++h+Lv yg+ ++++++++ a+ +e+ +fhs ey+++l +pe+ k ++++g
OGLUM11G05620.1 220 RRVCYYYDPGIAHIKFSDDHVMVPARVAMAHSLVGVYGMLGDMRRLRTRPATEAEIRRFHSPEYVDLLCDLTPESYAndaaL-RqKAEDHHGIG 312
589**********************************************************************987644431.22445556665 PP
class-1.txt 90 ..edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyt 181
+dcP fd l++yc+ ++G+sl+aa+ L ++ +diainw+GG+hha ++a+GfcyvnDivlai ell +++rv+y+did hhGDgv++af
OGLUM11G05620.1 313 geDDCPAFDRLWKYCRGYAGGSLAAARALVDGASDIAINWSGGMHHASACKATGFCYVNDIVLAINELLGTFSRVIYVDIDAHHGDGVQNAFLD 406
227******************************************************************************************* PP
class-1.txt 182 tdrvmtvsfhkyge.....effPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnls 270
++rvmt+sfh+yg+ +ffPg+G ++++g + gk+y+vnvPl+ g++D+ y+++f++++ k +e+f+Pea+vlqcGaDsl+gDrlg +ls
OGLUM11G05620.1 407 SNRVMTLSFHRYGKitphkDFFPGSGAINEIGDGAGKHYSVNVPLDAGVRDDVYHTLFEPIVGKAMEVFQPEAIVLQCGADSLSGDRLGGMELS 500
************85444448************************************************************************** PP
class-1.txt 271 ikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
++ghaecv+f++ fnlpll+lGGGGYt++ va +w+yetav++
OGLUM11G05620.1 501 VRGHAECVSFLRGFNLPLLLLGGGGYTINHVASTWCYETAVAV 543
****************************************986 PP
|
Protein Sequence
(Fasta) | MATRRDGGRR REGLTAEENS GGDWLSTLPD EILHNVLSFL PAHEAVRTCL LSRRWRNLWR 60
SAPVLRIRHR WVGVERFNKF VNNLLLLRDP VPLDELEFQT YTYWPTKMPR PCIYEVKYAE 120
QWIRHALMCK ARVEHCIVRS LGHEDMVEIE ESSSSMGQLV RFENLERVEN SHITSDQSKT 180
LVAAIPDKSN SGAGMQPNSQ SMATGGNSLP SPSCADDKKR RVCYYYDPGI AHIKFSDDHV 240
MVPARVAMAH SLVGVYGMLG DMRRLRTRPA TEAEIRRFHS PEYVDLLCDL TPESYANDAA 300
LRQKAEDHHG IGGEDDCPAF DRLWKYCRGY AGGSLAAARA LVDGASDIAI NWSGGMHHAS 360
ACKATGFCYV NDIVLAINEL LGTFSRVIYV DIDAHHGDGV QNAFLDSNRV MTLSFHRYGK 420
ITPHKDFFPG SGAINEIGDG AGKHYSVNVP LDAGVRDDVY HTLFEPIVGK AMEVFQPEAI 480
VLQCGADSLS GDRLGGMELS VRGHAECVSF LRGFNLPLLL LGGGGYTINH VASTWCYETA 540
VAVGKEGELP DDIEIPSHGY ELMYKNQGNK LHYQTSTATA ARKRSSSTEV TKGKVLEHLS 600
QVERAPSVQF QERRGGDNAA GVELYYERPP SLEDDEPAQR LHRLCFPAVA KRIRLNA 657Protein Fasta Sequence
>OGLUM11G05620.1|Class-I|Oryza glumaepatula
MATRRDGGRRREGLTAEENSGGDWLSTLPDEILHNVLSFLPAHEAVRTCLLSRRWRNLWRSAPVLRIRHRWVGVERFNKFVNNLLLLRDPVPLDELEFQTYTYWPTKMPRPCIYEVKYAEQWIRHALMCKARVEHCIVRSLGHEDMVEIEESSSSMGQLVRFENLERVENSHITSDQSKTLVAAIPDKSNSGAGMQPNSQSMATGGNSLPSPSCADDKKRRVCYYYDPGIAHIKFSDDHVMVPARVAMAHSLVGVYGMLGDMRRLRTRPATEAEIRRFHSPEYVDLLCDLTPESYANDAALRQKAEDHHGIGGEDDCPAFDRLWKYCRGYAGGSLAAARALVDGASDIAINWSGGMHHASACKATGFCYVNDIVLAINELLGTFSRVIYVDIDAHHGDGVQNAFLDSNRVMTLSFHRYGKITPHKDFFPGSGAINEIGDGAGKHYSVNVPLDAGVRDDVYHTLFEPIVGKAMEVFQPEAIVLQCGADSLSGDRLGGMELSVRGHAECVSFLRGFNLPLLLLGGGGYTINHVASTWCYETAVAVGKEGELPDDIEIPSHGYELMYKNQGNKLHYQTSTATAARKRSSSTEVTKGKVLEHLSQVERAPSVQFQERRGGDNAAGVELYYERPPSLEDDEPAQRLHRLCFPAVAKRIRLNA |
Nucleotide Sequence
(Fasta) | ATGGCTACGA GGCGCGACGG CGGCAGGAGA CGCGAGGGAC TCACGGCCGA GGAGAACAGC 60
GGCGGCGACT GGCTTAGCAC CCTCCCGGAC GAGATCCTCC ACAATGTTCT CTCCTTCCTG 120
CCAGCGCACG AGGCCGTGCG GACGTGTCTG CTCTCCCGCC GCTGGCGCAA CCTTTGGAGG 180
TCCGCCCCCG TGCTGCGCAT CAGACACAGA TGGGTGGGTG TGGAGAGGTT CAACAAGTTT 240
GTCAACAATC TTCTGCTCTT GCGCGACCCG GTGCCTCTTG ATGAGCTCGA GTTCCAGACC 300
TACACATACT GGCCTACCAA GATGCCCAGA CCTTGTATCT ACGAGGTCAA GTATGCTGAA 360
CAATGGATCA GGCATGCGCT CATGTGCAAG GCTCGGGTGG AGCACTGTAT AGTTAGATCT 420
CTGGGCCATG AAGATATGGT GGAAATTGAA GAAAGTAGCA GTTCAATGGG ACAATTGGTC 480
CGGTTTGAGA ACCTTGAAAG AGTCGAAAAT AGCCATATAA CCAGCGATCA GTCCAAAACA 540
TTGGTTGCTG CCATCCCCGA CAAGAGTAAC AGTGGTGCCG GCATGCAGCC GAACTCTCAA 600
TCGATGGCCA CCGGGGGGAA CTCGCTGCCG TCGCCGTCGT GCGCCGACGA CAAGAAGCGG 660
CGGGTGTGCT ACTACTACGA CCCCGGCATC GCCCACATCA AATTCAGCGA CGACCATGTC 720
ATGGTGCCCG CCCGCGTCGC CATGGCGCAC AGCCTCGTCG GCGTCTACGG CATGCTCGGC 780
GACATGCGCC GCCTCCGCAC GAGACCCGCC ACGGAGGCGG AGATCCGCCG CTTCCACTCG 840
CCGGAGTACG TCGACCTCCT CTGCGACCTC ACCCCGGAGA GCTACGCCAA CGACGCGGCG 900
CTTCGGCAGA AGGCGGAGGA TCACCACGGC ATCGGCGGCG AAGATGATTG CCCCGCCTTC 960
GACCGCCTCT GGAAGTACTG CCGCGGCTAC GCCGGCGGGT CGCTCGCCGC GGCGCGCGCG 1020
CTCGTCGACG GCGCCTCCGA CATCGCCATC AACTGGTCCG GCGGCATGCA CCACGCCTCC 1080
GCCTGCAAGG CCACCGGCTT CTGCTACGTC AACGACATCG TGCTCGCCAT CAACGAGCTC 1140
CTCGGCACCT TCAGCCGGGT CATCTACGTC GACATCGACG CGCACCACGG CGACGGCGTG 1200
CAGAACGCAT TCTTGGACTC CAACCGGGTC ATGACGCTGT CGTTCCACCG GTACGGCAAA 1260
ATCACGCCCC ACAAGGACTT CTTCCCGGGC TCCGGCGCCA TCAACGAAAT CGGCGACGGC 1320
GCCGGCAAGC ACTACAGCGT GAACGTGCCG CTGGACGCCG GCGTCCGCGA CGACGTGTAC 1380
CACACGCTGT TCGAGCCGAT CGTGGGCAAG GCCATGGAGG TGTTCCAGCC GGAGGCCATC 1440
GTGCTGCAGT GCGGCGCCGA CTCGCTCTCC GGCGACCGCC TCGGCGGCAT GGAGCTATCG 1500
GTGCGGGGCC ACGCGGAGTG CGTCAGCTTC CTCCGCGGGT TCAACCTGCC GCTGCTCCTC 1560
CTCGGCGGCG GCGGCTACAC CATCAACCAC GTCGCCTCCA CGTGGTGCTA CGAGACGGCG 1620
GTCGCCGTCG GCAAGGAGGG GGAGCTCCCC GACGACATAG AGATACCCAG CCACGGCTAC 1680
GAGCTCATGT ACAAGAACCA GGGGAACAAG CTCCATTACC AGACGTCGAC AGCGACGGCG 1740
GCGAGAAAGA GGTCGAGCAG CACGGAGGTC ACCAAGGGGA AGGTGCTCGA GCACCTGTCG 1800
CAGGTCGAGC GCGCGCCGAG CGTGCAGTTC CAGGAGCGAC GCGGCGGCGA CAATGCCGCC 1860
GGAGTTGAGC TCTACTACGA GCGCCCTCCG AGCCTGGAAG ACGACGAACC CGCGCAGAGG 1920
CTGCACCGCC TCTGCTTCCC CGCCGTGGCG AAGCGTATCA GGCTCAATGC CTGA
1975Nucleotide Fasta Sequence
>OGLUM11G05620.1|Class-I|Oryza glumaepatula
ATGGCTACGAGGCGCGACGGCGGCAGGAGACGCGAGGGACTCACGGCCGAGGAGAACAGCGGCGGCGACTGGCTTAGCACCCTCCCGGACGAGATCCTCCACAATGTTCTCTCCTTCCTGCCAGCGCACGAGGCCGTGCGGACGTGTCTGCTCTCCCGCCGCTGGCGCAACCTTTGGAGGTCCGCCCCCGTGCTGCGCATCAGACACAGATGGGTGGGTGTGGAGAGGTTCAACAAGTTTGTCAACAATCTTCTGCTCTTGCGCGACCCGGTGCCTCTTGATGAGCTCGAGTTCCAGACCTACACATACTGGCCTACCAAGATGCCCAGACCTTGTATCTACGAGGTCAAGTATGCTGAACAATGGATCAGGCATGCGCTCATGTGCAAGGCTCGGGTGGAGCACTGTATAGTTAGATCTCTGGGCCATGAAGATATGGTGGAAATTGAAGAAAGTAGCAGTTCAATGGGACAATTGGTCCGGTTTGAGAACCTTGAAAGAGTCGAAAATAGCCATATAACCAGCGATCAGTCCAAAACATTGGTTGCTGCCATCCCCGACAAGAGTAACAGTGGTGCCGGCATGCAGCCGAACTCTCAATCGATGGCCACCGGGGGGAACTCGCTGCCGTCGCCGTCGTGCGCCGACGACAAGAAGCGGCGGGTGTGCTACTACTACGACCCCGGCATCGCCCACATCAAATTCAGCGACGACCATGTCATGGTGCCCGCCCGCGTCGCCATGGCGCACAGCCTCGTCGGCGTCTACGGCATGCTCGGCGACATGCGCCGCCTCCGCACGAGACCCGCCACGGAGGCGGAGATCCGCCGCTTCCACTCGCCGGAGTACGTCGACCTCCTCTGCGACCTCACCCCGGAGAGCTACGCCAACGACGCGGCGCTTCGGCAGAAGGCGGAGGATCACCACGGCATCGGCGGCGAAGATGATTGCCCCGCCTTCGACCGCCTCTGGAAGTACTGCCGCGGCTACGCCGGCGGGTCGCTCGCCGCGGCGCGCGCGCTCGTCGACGGCGCCTCCGACATCGCCATCAACTGGTCCGGCGGCATGCACCACGCCTCCGCCTGCAAGGCCACCGGCTTCTGCTACGTCAACGACATCGTGCTCGCCATCAACGAGCTCCTCGGCACCTTCAGCCGGGTCATCTACGTCGACATCGACGCGCACCACGGCGACGGCGTGCAGAACGCATTCTTGGACTCCAACCGGGTCATGACGCTGTCGTTCCACCGGTACGGCAAAATCACGCCCCACAAGGACTTCTTCCCGGGCTCCGGCGCCATCAACGAAATCGGCGACGGCGCCGGCAAGCACTACAGCGTGAACGTGCCGCTGGACGCCGGCGTCCGCGACGACGTGTACCACACGCTGTTCGAGCCGATCGTGGGCAAGGCCATGGAGGTGTTCCAGCCGGAGGCCATCGTGCTGCAGTGCGGCGCCGACTCGCTCTCCGGCGACCGCCTCGGCGGCATGGAGCTATCGGTGCGGGGCCACGCGGAGTGCGTCAGCTTCCTCCGCGGGTTCAACCTGCCGCTGCTCCTCCTCGGCGGCGGCGGCTACACCATCAACCACGTCGCCTCCACGTGGTGCTACGAGACGGCGGTCGCCGTCGGCAAGGAGGGGGAGCTCCCCGACGACATAGAGATACCCAGCCACGGCTACGAGCTCATGTACAAGAACCAGGGGAACAAGCTCCATTACCAGACGTCGACAGCGACGGCGGCGAGAAAGAGGTCGAGCAGCACGGAGGTCACCAAGGGGAAGGTGCTCGAGCACCTGTCGCAGGTCGAGCGCGCGCCGAGCGTGCAGTTCCAGGAGCGACGCGGCGGCGACAATGCCGCCGGAGTTGAGCTCTACTACGAGCGCCCTCCGAGCCTGGAAGACGACGAACCCGCGCAGAGGCTGCACCGCCTCTGCTTCCCCGCCGTGGCGAAGCGTATCAGGCTCAATGCCTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
