WERAM Information


Tag Content
WERAM ID WERAM-Brd-0084
Ensembl Protein ID BRADI3G44780.1
Gene Name BRADI3G44780.1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
BRADI3G44780 BRADI3G44780.1 BRADI3G44780.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 4.10e-123 411.5 19 346
Organism Brachypodium distachyon
Domain Profile
  HDAC Class-I

     class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae.............els.. 80 
++v+y+yd+ ++++ yg++h+m+p+r+++th Lv +ygl ++++++++ a+ ++l fh y+e+l++++pe+ +
BRADI3G44780.1 19 RRVSYYYDPGIANVDYGEGHVMVPRRVAMTHALVSSYGLLPDMKRLRTRPATESDLRAFHGASYVELLRSINPESYRlnldqaktraeerG-Vgr 112
589***********************************************************************98877877665544331.122 PP
class-1.txt 81 kelkkfnvgedcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgv 175
++k+ + ++d Pv+dgl++yc ++G+sl+aa+ L +e+d+ainw+GG+hha + +asGfcyvnDivlai++ll ++rvly+did+hhGDgv
BRADI3G44780.1 113 VKTKENGDNYDNPVIDGLWDYCLSYAGGSLAAARALACGESDVAINWSGGMHHACRAKASGFCYVNDIVLAIQRLLARFRRVLYVDIDVHHGDGV 207
3555666667************************************************************************************* PP
class-1.txt 176 eeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyek.ifksviskvieafePeavvlqcGaDslagDrlgefnl 269
e+ f+ rvmtvsfh+y+ ffP+tG+ dvg+++g y+a+nvP+k g+dDe y + +f++++ +v+e+f P+avvlqcGaDsl+gD +g f+l
BRADI3G44780.1 208 EHRFRREPRVMTVSFHRYDGVFFPTTGEAADVGQGEGLYHALNVPMKAGMDDEGYLNvLFRPIMARVMEVFAPDAVVLQCGADSLSGDAIGGFHL 302
*****************************************************8865279*********************************** PP
class-1.txt 270 sikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
s+kgha cv f++sfn+pll+lGGGGYt++ va cw+yetav++
BRADI3G44780.1 303 SVKGHAACVAFLRSFNVPLLLLGGGGYTINHVASCWCYETAVAV 346
*****************************************986 PP

Protein Sequence
(Fasta)
METEGHSLRS ASCVDGGKRR VSYYYDPGIA NVDYGEGHVM VPRRVAMTHA LVSSYGLLPD 60
MKRLRTRPAT ESDLRAFHGA SYVELLRSIN PESYRLNLDQ AKTRAEERGV GRVKTKENGD 120
NYDNPVIDGL WDYCLSYAGG SLAAARALAC GESDVAINWS GGMHHACRAK ASGFCYVNDI 180
VLAIQRLLAR FRRVLYVDID VHHGDGVEHR FRREPRVMTV SFHRYDGVFF PTTGEAADVG 240
QGEGLYHALN VPMKAGMDDE GYLNVLFRPI MARVMEVFAP DAVVLQCGAD SLSGDAIGGF 300
HLSVKGHAAC VAFLRSFNVP LLLLGGGGYT INHVASCWCY ETAVAVGKEK EIPDDIPYHG 360
YEHYYKDQGY KLHYAVDKKN GRKDVSGLEK IKQDALKNLS MLRPPPTLLL QEPAGGDINV 420
NDLYDNDYSN PKRRREEDDP MERLHRLCGV EDLKGFFTGI GRRKKLGQL 469
Nucleotide Sequence
(Fasta)
ATGGAGACGG AAGGGCACTC TCTGCGGTCG GCGTCGTGCG TGGACGGCGG CAAGAGGCGC 60
GTGAGCTACT ACTACGACCC GGGCATCGCC AACGTGGACT ACGGCGAGGG CCACGTCATG 120
GTGCCCCGCC GCGTGGCCAT GACGCACGCC CTCGTGTCCT CCTACGGCCT GCTCCCGGAC 180
ATGAAGCGCC TCCGCACCAG GCCCGCCACC GAAAGCGACC TGCGCGCCTT CCACGGCGCC 240
TCCTACGTCG AGCTCCTCCG CTCCATCAAC CCGGAATCCT ACCGCCTCAA CCTCGACCAG 300
GCCAAGACGC GGGCCGAGGA GCGCGGCGTC GGCCGCGTGA AGACCAAGGA GAACGGCGAC 360
AACTACGACA ACCCCGTCAT CGACGGCCTC TGGGACTACT GCCTCAGCTA CGCCGGCGGG 420
TCCCTGGCCG CGGCGCGCGC GCTGGCCTGC GGCGAGTCCG ACGTGGCCAT CAACTGGTCC 480
GGCGGGATGC ACCACGCGTG CCGGGCCAAG GCCAGCGGCT TCTGCTACGT CAACGACATC 540
GTGCTCGCCA TCCAGCGGCT CCTCGCCCGC TTCCGCCGCG TGCTCTACGT CGACATCGAC 600
GTGCACCACG GCGACGGCGT CGAGCACCGC TTCCGGAGGG AGCCCCGGGT CATGACGGTC 660
TCCTTCCACC GCTACGACGG CGTCTTCTTC CCCACCACCG GCGAGGCTGC GGACGTCGGC 720
CAAGGCGAGG GGCTCTACCA CGCGCTCAAC GTGCCGATGA AGGCCGGCAT GGACGACGAG 780
GGCTACCTCA ACGTCCTCTT CCGGCCCATC ATGGCCCGGG TCATGGAGGT GTTCGCGCCG 840
GACGCCGTCG TGCTGCAGTG CGGGGCCGAC TCGCTCTCGG GCGACGCGAT CGGCGGGTTC 900
CACCTGTCAG TCAAGGGCCA CGCCGCCTGC GTCGCCTTCC TCCGCAGCTT CAACGTGCCG 960
CTGCTCCTGC TCGGCGGCGG CGGCTACACC ATCAACCACG TCGCCTCCTG CTGGTGCTAC 1020
GAGACGGCGG TGGCCGTCGG CAAGGAGAAG GAGATCCCCG ACGACATACC CTACCACGGT 1080
TACGAGCACT ACTACAAGGA CCAGGGATAC AAGCTCCATT ATGCAGTGGA CAAGAAGAAC 1140
GGCAGGAAGG ATGTCTCTGG CCTGGAGAAG ATAAAGCAGG ACGCTCTGAA GAACCTCTCC 1200
ATGCTCAGGC CGCCGCCCAC ATTGCTGCTC CAGGAGCCCG CCGGTGGGGA CATCAACGTG 1260
AATGACCTCT ACGACAACGA CTACAGTAAT CCCAAGAGAA GAAGAGAGGA AGACGACCCC 1320
ATGGAGAGGC TGCACCGGCT CTGCGGCGTC GAGGACCTAA AAGGTTTCTT CACTGGGATC 1380
GGCAGGAGAA AGAAACTAGG ACAACTATAG TCTATAGGTC AAGACATACA GGGTACCCAA 1440
ATACCCAATG TAAAAGGTGA AAGACATACA TACAGGGTAC CCAATGTAAG TGATAAGCAC 1500
CACAATTGTC CAATCCCGTT AAGCATT 1528
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Aet-0059 EMT05277 Aegilops tauschii 68 7e-148 521
WERAM-Orp-0006 OPUNC01G21000.1 Oryza punctata 60 3e-136 482
WERAM-Sob-0048 Sb03g026250.1 Sorghum bicolor 58 3e-135 479
WERAM-Orb-0005 OBART01G20930.1 Oryza barthii 59 4e-129 458
WERAM-Orgl-0006 OGLUM01G24610.1 Oryza glumaepatula 59 9e-128 454
WERAM-Orm-0006 OMERI01G19130.1 Oryza meridionalis 59 1e-127 454
WERAM-Orl-0006 KN538683.1_FGP175 Oryza longistaminata 56 3e-127 452
WERAM-Lep-0052 LPERR05G13220.1 Leersia perrieri 56 4e-127 452
WERAM-Orni-0005 ONIVA01G23540.1 Oryza nivara 59 7e-127 451
WERAM-Orr-0006 ORUFI01G23650.1 Oryza rufipogon 58 5e-125 445
WERAM-Ors-0100 OS11T0200000-01 Oryza sativa 55 9e-125 444
WERAM-Ori-0118 BGIOSGA034344-PA Oryza indica 55 1e-123 440
WERAM-Sei-0017 Si004835m Setaria italica 55 1e-117 420
WERAM-Orbr-0007 OB01G30550.1 Oryza brachyantha 49 3e-108 389
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 51 3e-107 386
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 53 1e-106 384
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 54 3e-106 382
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 54 4e-106 382
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 54 4e-106 382
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 54 5e-106 382
WERAM-Sol-0053 Solyc03g112410.1.1 Solanum lycopersicum 50 6e-106 381
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 53 8e-105 378
WERAM-Viv-0086 VIT_14s0006g01820.t01 Vitis vinifera 51 1e-104 377
WERAM-Amt-0016 ERM94967 Amborella trichopoda 50 2e-104 377
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 50 2e-104 377
WERAM-Pot-0051 POPTR_0004s21950.1 Populus trichocarpa 53 2e-104 376
WERAM-Glm-0156 GLYMA13G06010.3 Glycine max 51 3e-104 376
WERAM-Thc-0026 EOX98961 Theobroma cacao 53 4e-104 375
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 48 4e-104 375
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 48 4e-104 375
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 48 5e-104 375
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 48 7e-104 375
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 48 7e-104 375
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 48 8e-104 374
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 48 1e-103 374
WERAM-Prp-0056 EMJ02177 Prunus persica 53 1e-103 374
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 48 1e-103 374
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 48 1e-103 374
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 48 1e-103 374
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 48 1e-103 374
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 48 1e-103 374
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 48 1e-103 374
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 48 1e-103 374
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 48 2e-103 373
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 48 3e-103 372
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 48 4e-103 372
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 48 1e-102 371
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 48 3e-102 369
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 52 3e-102 369
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 47 4e-102 369
WERAM-Met-0084 KEH36404 Medicago truncatula 51 4e-102 369
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 48 1e-101 367
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 48 2e-100 363
WERAM-Hov-0099 MLOC_71091.1 Hordeum vulgare 54 3e-100 362
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 47 4e-100 362
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 47 5e-100 362
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 50 6e-100 362
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 47 7e-100 361
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 47 9e-100 361
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 48 3e-99 359
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 47 3e-99 359
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 48 5e-99 358
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 48 7e-99 358
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 48 2e-98 356
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 47 5e-98 355
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 47 6e-98 355
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 47 7e-98 355
WERAM-Xim-0061 ENSXMAP00000005239.1 Xiphophorus maculatus 47 9e-98 354
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 46 2e-97 353
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 48 2e-97 353
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 47 2e-97 353
WERAM-Mua-0114 GSMUA_Achr8P04190_001 Musa acuminata 50 3e-97 353
WERAM-Orn-0136 ENSONIP00000014285.1 Oreochromis niloticus 48 5e-97 352
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 48 5e-97 352
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 47 5e-97 352
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 47 6e-97 352
WERAM-Leo-0176 ENSLOCP00000020984.1 Lepisosteus oculatus 47 7e-97 351
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 47 7e-97 351
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 47 7e-97 351
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 47 7e-97 351
WERAM-Ten-0060 ENSTNIP00000007837.1 Tetraodon nigroviridis 46 8e-97 351
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 49 1e-96 350
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 48 4e-96 349
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 46 6e-96 348
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 48 9e-96 348
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 45 1e-94 344
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 47 7e-92 335
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 47 9e-92 334
WERAM-Chr-0001 EDP02188 Chlamydomonas reinhardtii 47 9e-92 334
WERAM-Trv-0003 EHK19072 Trichoderma virens 44 1e-91 334
WERAM-Trr-0017 EGR48353 Trichoderma reesei 43 2e-91 333
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 46 3e-91 333
WERAM-Ved-0020 EGY15146 Verticillium dahliae 42 3e-91 333
WERAM-Caa-0018 KGT69072 Candida albicans 44 3e-91 333
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 46 4e-91 332
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 45 5e-91 332
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 42 6e-91 332
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 46 1e-90 330
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 47 2e-90 330
Created Date 25-Jun-2016