WERAM Information


Tag Content
WERAM ID WERAM-Xim-0022
Ensembl Protein ID ENSXMAP00000002092.1
Gene Name hdac4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSXMAG00000002072.1 ENSXMAT00000002097.1 ENSXMAP00000002092.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 8.00e-149 495.2 55 959
HDAC Class-I 6.30e-31 108.1 81 922
Organism Xiphophorus maculatus
Domain Profile
  HDAC Class-II

           class-2.txt  23 hpEkpeRiqailsrlqeaglle..kleelka.rkatkeelqlvHseehvelletae.klekeeles..ltvdsdsiylesksi 99 
h + +R i + ++++ l+ + ++l++ k +++ l+l H++e++e+ ++ e + ++++le+ +++ +++ ++++
ENSXMAP00000002092.1 55 HKQELQRQLLIAEFHRQHEQLSrqHEVQLQEhIKHQQDLLALKHQQELLEHHRKMEqQHHEQQLEKqqREQKLQQLKNKERGQ 137
44444554455554444433331123334441444555566778888888887777566667776633333344444444444 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84
+glvyd+ m khq++++n + hpE+++Riq+i+srlqe+gl+ ++e++++rka++eelq+vHse+hv+l++t+ +k e ++
ENSXMAP00000002092.1 625 TGLVYDSLMQKHQCICGNATIHPEHAGRIQSIWSRLQETGLRAQCECIRGRKASQEELQTVHSEAHVQLYGTNPLRQKLECSVnpmfvr 713
79***********************************************************************544444444499**** PP
class-2.txt 85 .....ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkiliv 168
++vdsd+i++e +s++aarlavG+v+elv+kv++gelkngfavvRPPGHHaeest+mGFC+fn+va+aakllqq+l+v+kiliv
ENSXMAP00000002092.1 714 lpcggIGVDSDTIWNEIHSSTAARLAVGSVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIV 802
***************************************************************************************** PP
class-2.txt 169 DwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlpiakeFkP 254
DwDvHhGnGtq++fy dp+vlylSlHRyd+g+ffp gsga+devg+g+g+gfnvN+a++ggl mgdaeylaafr+vv+pia+eF+P
ENSXMAP00000002092.1 803 DWDVHHGNGTQQAFYADPSVLYLSLHRYDDGNFFP--GSGAPDEVGSGAGVGFNVNMAFTGGLeppMGDAEYLAAFRTVVMPIANEFAP 889
***********************************..**************************************************** PP
class-2.txt 255 dlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
d+vlvs+GfDa++g plgg+++takc+++lt+ql++laggr+vl+lEGG++l ai++a+ea+++aLlg
ENSXMAP00000002092.1 890 DVVLVSSGFDAVDGhaPPLGGYKLTAKCFSYLTRQLMGLAGGRLVLALEGGHDLMAICDASEACISALLG 959
**************999***************************************************96 PP

  HDAC Class-I

           class-1.txt  43 leivkpkkasaeellkfhseeyieflkkvepenaeelsk 81 
+++ + k +++ l+ h++e +e+ +k+e++++e+ +
ENSXMAP00000002092.1 81 VQLQEHIKHQQDLLALKHQQELLEHHRKMEQQHHEQQLE 119
222222222222223334444444444444444332222 PP
class-1.txt 18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae..elskelkkf...nvgedc.Pvfdglfe 100
+ hp r++ + + + + gl + e ++ +kas+eel+++hse+++++ + ++ +++ + + ++g d+ + +++++
ENSXMAP00000002092.1 644 TIHPEHAGRIQSIWSRLQETGLRAQCECIRGRKASQEELQTVHSEAHVQLYGTNPLRQKLecSVNPMFVRLpcgGIGVDSdTIWNEIHS 732
45788888999999999999****************************98654433333222333333443112555565247788876 PP
class-1.txt 101 y..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveeafyttd 183
++l G+ +e + k+ ++e + a+ G hha s Gfcy n + +a l++ + +++l +d d+hhG+g ++afy+
ENSXMAP00000002092.1 733 StaARLAVGSVVELVFKVATGELKngFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQrlNVSKILIVDWDVHHGNGTQQAFYADP 820
5114567899999999999887662255555555.*******************988777644678*********************** PP
class-1.txt 184 rvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslagD..rlg 265
v+ +s+h+y++ +ffPg+G ++vg + g + vn+ ++ g++ D +y + f++v+ ++ + f P++v++ G D++ g +lg
ENSXMAP00000002092.1 821 SVLYLSLHRYDDgNFFPGSGAPDEVGSGAGVGFNVNMAFTGGLEppmgDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVDGHapPLG 909
**********9746***********************98888644444*********************************875338** PP
class-1.txt 266 efnlsikghaecv 278
++l+ k ++
ENSXMAP00000002092.1 910 GYKLTAKCFSYLT 922
*****99887655 PP

Protein Sequence
(Fasta)
LVDVSTAALP SQVPSAASAI LPMDLRIVDH SHHHHQQPPC RQDQHLQQEL VALKHKQELQ 60
RQLLIAEFHR QHEQLSRQHE VQLQEHIKHQ QDLLALKHQQ ELLEHHRKME QQHHEQQLEK 120
QQREQKLQQL KNKERGQESA VASTEVKMRL QEFVLNKKKA LAQRNLNHCM PSDPRYWYGK 180
TQHSSLDQSS PPQAALSAYT HPVLGAFDSK DDFPLRKTAS EPNLKRRSWL KQKVTERRSS 240
PLLRRKDGPI TTAKKRSLDR ADSACNSAPG SGPSSPNNSS SNIPSENGIP VSTSPGEVNS 300
MAAHRLATRD GSLSQLSLYT SPSLPNITLG LPASGPANSV VSGHQDGETH LALPALQPGI 360
PLASAFLPTS HLPSYLASSA LDRDGPGGGA AGHNPLLQHM VLMEQSHSSM VGLGGLPLPS 420
PTVSKLVRGH RPLGRTQSAP LPQQPCGQAQ ALQQLVVQQQ HQQFLEKHKQ LFQQQHIINK 480
IMSKPGDQGR QHQSHPEETE EELREHQGLT SSSSSSSTSS GPETGLIRGL VIKQEPPDLQ 540
EQEEREQRDQ RERQAEQDFM FKQQAMLLEQ QRIHQLRSYR ASMEAAGLPV SLAAHRPLSR 600
TQSSPASASF PIVVSEPPVK HRFTTGLVYD SLMQKHQCIC GNATIHPEHA GRIQSIWSRL 660
QETGLRAQCE CIRGRKASQE ELQTVHSEAH VQLYGTNPLR QKLECSVNPM FVRLPCGGIG 720
VDSDTIWNEI HSSTAARLAV GSVVELVFKV ATGELKNGFA VVRPPGHHAE ESTPMGFCYF 780
NSVAIAAKLL QQRLNVSKIL IVDWDVHHGN GTQQAFYADP SVLYLSLHRY DDGNFFPGSG 840
APDEVGSGAG VGFNVNMAFT GGLEPPMGDA EYLAAFRTVV MPIANEFAPD VVLVSSGFDA 900
VDGHAPPLGG YKLTAKCFSY LTRQLMGLAG GRLVLALEGG HDLMAICDAS EACISALLGN 960
ELDPIPYEVL QQKPNANAVR SMEKVIEVQS KYWRSLQRSA STLGWSLNEA LQRDVEEAET 1020
VSAMASLSVA NKHIGKRAEE EPMEEEAPM 1049
Nucleotide Sequence
(Fasta)
TTAGTGGATG TGAGCACAGC GGCGCTCCCC TCGCAGGTTC CCTCCGCCGC CTCTGCCATC 60
CTTCCCATGG ACCTCCGCAT TGTGGACCAC TCTCACCACC ACCACCAGCA GCCTCCCTGC 120
CGTCAGGACC AGCACTTGCA ACAGGAACTG GTGGCTCTGA AGCACAAGCA GGAGCTCCAG 180
AGGCAGCTAC TGATTGCTGA GTTTCATAGG CAACACGAGC AACTGTCGCG ACAACATGAA 240
GTCCAGCTCC AGGAGCATAT TAAGCATCAA CAGGACCTGT TGGCCCTCAA GCATCAACAA 300
GAGCTGCTGG AGCATCACAG GAAGATGGAG CAGCAGCATC ATGAGCAACA GCTGGAGAAG 360
CAGCAGCGGG AACAGAAACT CCAGCAGCTG AAAAACAAGG AAAGGGGACA AGAAAGTGCT 420
GTGGCCAGCA CGGAGGTAAA GATGCGACTT CAGGAGTTTG TGCTGAACAA GAAGAAAGCC 480
CTGGCTCAGC GAAACCTAAA CCACTGTATG CCCAGTGACC CTCGCTACTG GTATGGGAAA 540
ACTCAGCATA GTTCTTTGGA CCAGAGCTCA CCCCCTCAAG CGGCGCTGTC AGCGTACACG 600
CATCCAGTGC TGGGAGCGTT CGACTCAAAG GATGACTTTC CTCTGAGGAA AACAGCATCT 660
GAGCCCAACC TGAAGCGCCG TTCATGGCTA AAGCAGAAAG TGACGGAGCG TCGAAGCAGT 720
CCTCTGCTCC GCAGGAAAGA CGGGCCAATC ACTACTGCCA AGAAGAGATC ACTCGACAGA 780
GCTGACTCTG CATGCAACAG TGCGCCAGGC TCCGGCCCCA GTTCCCCCAA CAACAGCTCC 840
AGTAACATCC CCAGTGAAAA TGGCATCCCA GTCTCTACCA GCCCAGGAGA GGTAAACAGC 900
ATGGCTGCAC ACAGGCTGGC TACCAGGGAC GGCTCACTCA GCCAGTTGTC TCTCTACACC 960
TCACCTTCTC TGCCCAACAT CACTTTAGGA CTGCCTGCCT CCGGCCCTGC AAACTCTGTG 1020
GTATCGGGAC ACCAAGATGG CGAGACTCAT CTGGCGCTGC CAGCGTTACA GCCGGGCATT 1080
CCGTTGGCCT CGGCTTTTCT GCCCACCTCC CACCTGCCGT CCTACTTGGC CTCGTCGGCG 1140
TTGGACAGGG ACGGGCCTGG AGGGGGCGCA GCTGGTCACA ACCCCCTCCT TCAACACATG 1200
GTGCTAATGG AGCAGAGCCA CAGCTCAATG GTCGGTCTGG GTGGCCTGCC TCTCCCATCT 1260
CCCACCGTCT CCAAACTGGT ACGGGGCCAC CGTCCCCTGG GAAGGACCCA GTCGGCCCCT 1320
CTGCCTCAGC AGCCGTGCGG ACAGGCCCAA GCCCTGCAGC AGCTGGTGGT CCAGCAGCAG 1380
CATCAGCAGT TCCTGGAAAA GCACAAGCAA CTGTTCCAAC AGCAGCACAT CATCAATAAG 1440
ATCATGTCTA AGCCTGGCGA TCAGGGTAGG CAGCATCAGA GTCACCCAGA GGAGACAGAA 1500
GAGGAACTCA GGGAGCACCA GGGACTGACC TCATCCTCGT CGTCATCATC CACTTCGTCT 1560
GGGCCAGAAA CGGGGTTGAT ACGGGGTCTG GTCATCAAGC AGGAACCACC AGACCTCCAA 1620
GAGCAAGAAG AGAGGGAACA ACGGGACCAG AGAGAGAGAC AGGCTGAGCA GGACTTCATG 1680
TTCAAACAAC AGGCGATGCT GTTGGAGCAG CAGCGGATCC ACCAGCTGCG GAGCTACCGA 1740
GCCTCCATGG AAGCGGCCGG GTTACCGGTC AGCCTTGCTG CTCACCGCCC TCTGTCCCGG 1800
ACGCAGTCAT CCCCAGCCTC CGCTTCCTTC CCCATTGTTG TCTCGGAGCC TCCAGTGAAG 1860
CACCGATTCA CCACAGGTCT AGTGTATGAC TCCTTGATGC AGAAACATCA GTGTATCTGC 1920
GGCAATGCCA CTATTCATCC CGAGCATGCC GGCCGTATTC AGAGTATCTG GTCCCGGCTG 1980
CAGGAAACAG GCCTGAGGGC TCAGTGTGAG TGTATCCGTG GAAGGAAGGC GTCACAGGAG 2040
GAGCTGCAGA CGGTTCACTC TGAGGCCCAC GTCCAGCTGT ACGGAACCAA CCCGCTGAGA 2100
CAGAAACTGG AGTGTTCCGT GAATCCCATG TTTGTGAGGT TACCATGTGG AGGCATTGGG 2160
GTGGACAGTG ACACAATCTG GAATGAGATC CATTCGTCTA CAGCTGCTCG ACTGGCCGTT 2220
GGCTCAGTGG TGGAGCTGGT TTTCAAAGTA GCAACAGGAG AGCTGAAGAA CGGTTTTGCT 2280
GTAGTTCGGC CACCCGGACA CCATGCTGAG GAGAGCACAC CTATGGGTTT CTGTTATTTC 2340
AACTCTGTCG CCATTGCAGC CAAGCTCCTG CAGCAGAGGC TTAATGTCAG CAAAATCCTC 2400
ATAGTTGACT GGGATGTTCA CCATGGCAAC GGGACCCAGC AGGCCTTCTA CGCAGACCCC 2460
AGTGTTCTGT ACCTTTCTCT ACATCGCTAT GACGATGGGA ACTTCTTCCC CGGCAGCGGA 2520
GCTCCAGATG AGGTGGGCAG CGGTGCAGGT GTGGGCTTCA ACGTGAACAT GGCATTTACT 2580
GGGGGCCTTG AACCTCCCAT GGGGGACGCA GAGTATCTGG CTGCCTTCAG AACGGTGGTG 2640
ATGCCCATTG CCAATGAGTT CGCTCCAGAT GTGGTTCTGG TGTCCTCTGG CTTCGATGCT 2700
GTCGACGGAC ATGCCCCACC GCTCGGAGGA TACAAACTGA CAGCCAAATG CTTCAGCTAC 2760
CTGACCAGGC AGCTGATGGG CCTGGCCGGC GGTCGCTTGG TGCTTGCCCT GGAAGGGGGT 2820
CATGACCTGA TGGCCATATG TGATGCCTCT GAAGCCTGCA TTTCTGCTCT GCTCGGCAAT 2880
GAGTTGGACC CCATTCCTTA CGAGGTGCTG CAGCAGAAAC CAAATGCTAA TGCTGTGCGC 2940
TCTATGGAGA AAGTCATTGA GGTTCAGAGT AAATATTGGC GCTCTCTGCA GCGTTCTGCC 3000
TCCACCCTCG GTTGGTCGTT GAATGAAGCG CTGCAGCGTG ACGTGGAGGA AGCTGAAACT 3060
GTTTCAGCCA TGGCTTCGTT GTCAGTCGCT AACAAGCACA TTGGAAAAAG GGCTGAAGAG 3120
GAGCCGATGG AAGAGGAAGC TCCCATGTAA 3151
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pof-0029 ENSPFOP00000001978.1 Poecilia formosa 93 0.0 1707
WERAM-Orn-0049 ENSONIP00000005635.1 Oreochromis niloticus 83 0.0 1530
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 79 0.0 1471
WERAM-Gaa-0020 ENSGACP00000002894.1 Gasterosteus aculeatus 81 0.0 1468
WERAM-Ten-0103 ENSTNIP00000011743.1 Tetraodon nigroviridis 83 0.0 1444
WERAM-Tar-0063 ENSTRUP00000012899.1 Takifugu rubripes 80 0.0 1440
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 75 0.0 1383
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 73 0.0 1348
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 75 0.0 1278
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 70 0.0 1229
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 70 0.0 1226
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 68 0.0 1225
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 70 0.0 1222
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 69 0.0 1221
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 70 0.0 1218
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 71 0.0 1217
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 69 0.0 1212
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 68 0.0 1207
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 68 0.0 1207
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 69 0.0 1206
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 69 0.0 1203
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 68 0.0 1202
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 68 0.0 1200
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 68 0.0 1199
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 68 0.0 1199
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 68 0.0 1194
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 68 0.0 1189
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 69 0.0 1185
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 68 0.0 1184
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 68 0.0 1179
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 70 0.0 1170
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 66 0.0 1167
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 66 0.0 1162
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 67 0.0 1154
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 65 0.0 1149
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 66 0.0 1142
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 65 0.0 1131
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 70 0.0 1130
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 64 0.0 1109
WERAM-Poa-0116 ENSPPYP00000014905.2 Pongo abelii 64 0.0 1104
WERAM-Dio-0038 ENSDORP00000004330.1 Dipodomys ordii 59 0.0 966
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 68 0.0 847
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 68 0.0 840
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 50 0.0 831
WERAM-Eqc-0153 ENSECAP00000016533.1 Equus caballus 51 0.0 819
WERAM-Mod-0016 ENSMODP00000001749.3 Monodelphis domestica 52 0.0 816
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 51 0.0 815
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 73 0.0 811
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 66 0.0 753
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 69 0.0 692
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 50 0.0 681
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 69 0.0 675
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 68 0.0 654
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 68 0.0 653
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 68 0.0 653
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 66 0.0 652
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 66 3e-177 620
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 64 2e-176 617
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 67 3e-174 610
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 59 7e-156 549
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 71 4e-154 543
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 61 6e-144 509
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 70 4e-126 450
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 50 1e-124 445
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 50 2e-123 441
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 50 1e-112 405
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 53 9e-88 322
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 44 9e-81 299
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 45 1e-79 296
WERAM-Bro-0168 Bo9g014470.1 Brassica oleracea 44 1e-79 295
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 42 4e-78 290
Created Date 25-Jun-2016