WERAM Information


Tag Content
WERAM ID WERAM-Tar-0171
Ensembl Protein ID ENSTRUP00000035900.1
Gene Name hdac4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSTRUG00000014035.1 ENSTRUT00000036030.1 ENSTRUP00000035900.1
ENSTRUG00000014035.1 ENSTRUT00000036031.1 ENSTRUP00000035901.1
ENSTRUG00000014035.1 ENSTRUT00000036032.1 ENSTRUP00000035902.1
ENSTRUG00000014035.1 ENSTRUT00000036033.1 ENSTRUP00000035903.1
ENSTRUG00000014035.1 ENSTRUT00000036034.1 ENSTRUP00000035904.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.70e-148 495.4 98 992
HDAC Class-I 1.80e-30 107.8 671 961
Organism Takifugu rubripes
Domain Profile
  HDAC Class-II

           class-2.txt  39 eagllekleelka.rkatkeelqlvHseehvelletae.klekeeles 84 
e+ +++ +l++ k+++e l+l H++e++e+ ++ e + ++ele+
ENSTRUP00000035900.1 98 EQLSRQHEAQLQEhIKQQQELLALKHQQELLEHQRKMEnHRMEQELEK 145
222222233333313444444555566666666655554555555555 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84
+glvyd+ m khq++++n+++hpE+++Riq+i+srlqe+gl+ ++e++++rkat+eelq+vHse+hv l++t+ +++l+
ENSTRUP00000035900.1 653 TGLVYDSLMQKHQCMCGNTNNHPEHAGRIQSIWSRLQETGLRAQCECIRGRKATLEELQTVHSEAHVLLYGTN--PLRQKLDCrllpgs 739
79***********************************************************************..445566666799** PP
class-2.txt 85 ............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk 161
++vdsd+i++e++s++aarlavG+v+elv+kv+++elkngfavvRPPGHHaeest+mGFC+fn+va+aakllqq+l+
ENSTRUP00000035900.1 740 itpmfvrlpcggIGVDSDTIWNEVHSSSAARLAVGSVVELVFKVATQELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLN 828
***************************************************************************************** PP
class-2.txt 162 vkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlp 247
++kilivDwDvHhGnGtq++fy+dp+vlylS+HRyd+g+ffp gsga+devg+g+g+gfnvNva++ggl m daeylaafr vv+p
ENSTRUP00000035900.1 829 INKILIVDWDVHHGNGTQQAFYDDPSVLYLSIHRYDDGNFFP--GSGAPDEVGSGPGVGFNVNVAFTGGLeppMSDAEYLAAFRSVVMP 915
******************************************..********************************************* PP
class-2.txt 248 iakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
ia+eF+Pd+vlvs+GfDa+eg plgg+++takc+++lt+ql++laggr+vl+lEGG++l+ai++a+ea++ aLlg
ENSTRUP00000035900.1 916 IANEFAPDIVLVSSGFDAVEGhpPPLGGYTLTAKCFGYLTRQLMTLAGGRLVLALEGGHDLTAICDASEACLAALLG 992
*********************9999**************************************************96 PP

  HDAC Class-I

           class-1.txt  17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae............elskelkkfnvgedc. 92 
+++hp r++ + + + + gl + e ++ +ka+ eel+++hse+++ + +p ++ +l ++g d+
ENSTRUP00000035900.1 671 TNNHPEHAGRIQSIWSRLQETGLRAQCECIRGRKATLEELQTVHSEAHVLLYG-TNPLRQKldcrllpgsitpM-FVRLPCGGIGVDSd 757
57888888899999999999999999999999999999999999998875443.33333333456666633321.12333334555552 PP
class-1.txt 93 Pvfdglfey..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgv 175
+ +++++ ++l G+ +e + k+ ++e + a+ G hha s Gfcy n + +a l++ + +++l +d d+hhG+g
ENSTRUP00000035900.1 758 TIWNEVHSSsaARLAVGSVVELVFKVATQELKngFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQrlNINKILIVDWDVHHGNGT 845
366666654114567788889999998887662245555444.*******************987777645789*************** PP
class-1.txt 176 eeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdg....idDesyekifksviskvieafePeavvlqcGaDsl 259
++afy v+ +s+h+y++ +ffPg+G ++vg + g + vnv ++ g + D +y + f+sv+ ++ + f P++v++ G D++
ENSTRUP00000035900.1 846 QQAFYDDPSVLYLSIHRYDDgNFFPGSGAPDEVGSGPGVGFNVNVAFTGGleppMSDAEYLAAFRSVVMPIANEFAPDIVLVSSGFDAV 934
******************9746***********************98887222357********************************* PP
class-1.txt 260 agD..rlgefnlsikghaecvkfvksf 284
g +lg + l+ k ++ + + +
ENSTRUP00000035900.1 935 EGHppPLGGYTLTAKCFGYLTRQLMTL 961
997336*******99998866655554 PP

Protein Sequence
(Fasta)
ECALSSTEGI LGKEQPLEVL KTSVLNHIPT VDINSALPLR LPPAAIPMDL RVDPHQQQQQ 60
VSQPSVCDQQ LQQELLTLKQ KQQIQRQILI AEFQRQHEQL SRQHEAQLQE HIKQQQELLA 120
LKHQQELLEH QRKMENHRME QELEKQQREQ KLQLLKNKER GQESAVASTE VKMRLQEFVL 180
NKKKALAQRS LNQGGPHNDA PYWYRKTQHS SLDQSSPPQT GVSTYNQPVL GVYNPRDDFP 240
LRKTASEPNL KLRSRLKQKV SERRSSPLLR RRDSPITTAK KRSLDMADSA CSSAPGSGPS 300
SPNNSSNNIP SENGVTVSVS NNSEVSLAQR MCGGAERGSV NQLSLYTSPS LPNITLGLPA 360
TATATAASNV TSAQPDGGLQ PALSLSPPFL SGGHLTPYLA EAGAGTGGHA AHSPLLQHMV 420
LMEQSPAQSP LVTGTLRLPS HSKTSIHLSK LMSSFHMQRQ HRPLGRTQSA PLPQGSAAQA 480
HAQALALQQL VVQQQHQQFL EKHKQQFQQQ QLHLNKMITK PSESPVGRQH QSHPEETEEE 540
LREHQDGGAL PAGVTIKQEP PDPQELQEEV LHRERERQAE QQELLFRQQA LLLEQQRIHQ 600
LRNYQASMEA AGLSISFPGH RPLSRAQSSP ASASSFPISV PASDPPTKPH FTTGLVYDSL 660
MQKHQCMCGN TNNHPEHAGR IQSIWSRLQE TGLRAQCECI RGRKATLEEL QTVHSEAHVL 720
LYGTNPLRQK LDCRLLPGSI TPMFVRLPCG GIGVDSDTIW NEVHSSSAAR LAVGSVVELV 780
FKVATQELKN GFAVVRPPGH HAEESTPMGF CYFNSVAIAA KLLQQRLNIN KILIVDWDVH 840
HGNGTQQAFY DDPSVLYLSI HRYDDGNFFP GSGAPDEVGS GPGVGFNVNV AFTGGLEPPM 900
SDAEYLAAFR SVVMPIANEF APDIVLVSSG FDAVEGHPPP LGGYTLTAKC FGYLTRQLMT 960
LAGGRLVLAL EGGHDLTAIC DASEACLAAL LGQELDPLPK SVLEQRPNVN AVRSLEKVLE 1020
IHSKYWRSVQ RYSLHLGLSL LEAKRGDSEE AEAVSAMASL SVANTNAMDQ SRSEEEPMEE 1080
EEPL 1084
Nucleotide Sequence
(Fasta)
GAGTGTGCTC TCTCTTCCAC AGAGGGAATC CTGGGGAAGG AGCAGCCACT GGAGGTTCTG 60
AAGACATCCG TGCTCAACCA CATCCCAACA GTGGACATCA ACTCGGCGCT GCCCCTGCGT 120
CTCCCTCCAG CTGCCATCCC CATGGACCTG CGCGTGGACC CTCACCAGCA GCAGCAGCAG 180
GTGTCCCAGC CTTCGGTGTG TGACCAGCAG CTACAGCAGG AGCTTCTGAC ACTGAAGCAG 240
AAGCAGCAGA TCCAGCGGCA GATCCTCATC GCCGAGTTCC AGCGGCAGCA CGAGCAGCTG 300
TCTCGCCAAC ACGAGGCCCA GCTGCAGGAG CACATAAAGC AGCAACAGGA ACTCCTGGCA 360
TTGAAGCATC AGCAGGAGCT ACTGGAGCAC CAGAGGAAGA TGGAGAACCA CCGCATGGAG 420
CAGGAGCTAG AGAAGCAGCA GAGGGAGCAG AAACTGCAGC TGCTGAAGAA CAAGGAGAGA 480
GGTCAAGAGA GTGCTGTGGC CAGCACTGAG GTAAAGATGC GCCTCCAGGA GTTTGTTCTC 540
AACAAGAAGA AGGCCCTGGC ACAGCGGAGC CTCAACCAAG GAGGGCCCCA CAATGATGCC 600
CCCTACTGGT ACCGCAAAAC TCAGCACAGC TCCCTGGACC AGAGCTCACC ACCACAGACA 660
GGTGTTTCCA CCTACAACCA ACCTGTGCTG GGCGTCTACA ATCCCCGGGA TGACTTCCCA 720
CTGCGAAAGA CTGCCTCAGA ACCCAACCTG AAGCTCCGCT CCAGGCTGAA GCAGAAGGTG 780
AGCGAGCGGA GGAGCAGTCC GCTGCTTCGT CGTCGAGACA GCCCCATCAC TACTGCTAAG 840
AAGCGCTCCC TTGATATGGC AGACTCTGCA TGTAGCAGCG CCCCCGGCTC TGGCCCAAGC 900
TCCCCGAATA ACAGCTCCAA CAATATCCCC AGTGAGAATG GCGTCACGGT GTCAGTCTCC 960
AACAACAGCG AGGTTTCCCT GGCCCAGAGG ATGTGCGGTG GTGCTGAGCG GGGCTCCGTG 1020
AACCAGCTGT CCCTCTACAC CTCACCATCC TTACCCAACA TCACCTTGGG GCTGCCCGCC 1080
ACGGCTACGG CCACCGCTGC TTCCAACGTG ACCTCAGCCC AGCCGGATGG GGGCCTGCAG 1140
CCAGCGCTCT CCCTCAGCCC TCCGTTTCTC TCCGGTGGCC ATTTGACTCC CTACCTGGCC 1200
GAGGCAGGGG CAGGAACAGG CGGGCACGCC GCTCACAGCC CGCTGCTTCA ACACATGGTG 1260
CTCATGGAGC AAAGCCCAGC ACAGAGCCCC CTGGTGACAG GTACACTGCG TCTGCCCTCG 1320
CATTCAAAGA CGTCCATTCA TTTGTCCAAA CTAATGAGCT CTTTTCATAT GCAGCGGCAG 1380
CACCGGCCCC TCGGGCGAAC CCAGTCGGCC CCTCTGCCAC AGGGGAGCGC GGCCCAGGCC 1440
CACGCCCAGG CCCTGGCCCT GCAGCAGCTG GTGGTCCAGC AGCAGCACCA GCAGTTCCTG 1500
GAGAAGCACA AACAGCAGTT CCAGCAGCAG CAGCTCCACC TCAACAAGAT GATTACAAAG 1560
CCCAGCGAGA GCCCTGTGGG GCGTCAGCAC CAGAGCCACC CAGAAGAGAC AGAGGAGGAG 1620
CTGCGGGAAC ACCAGGACGG CGGGGCCCTG CCGGCGGGGG TCACCATCAA GCAGGAGCCA 1680
CCTGATCCCC AGGAGCTCCA GGAGGAGGTG CTGCACAGGG AGCGGGAGAG GCAGGCTGAG 1740
CAGCAGGAGC TGCTTTTCAG ACAGCAGGCC CTGTTGCTGG AGCAGCAACG GATCCATCAG 1800
CTGAGGAACT ACCAGGCCTC CATGGAGGCT GCCGGCTTGT CGATCTCCTT CCCAGGACAT 1860
CGCCCTCTCT CCAGAGCCCA GTCGTCTCCA GCCTCGGCCT CCTCCTTCCC GATCAGCGTT 1920
CCTGCCTCTG ACCCTCCGAC CAAACCTCAC TTCACCACAG GGCTGGTGTA TGACTCCCTC 1980
ATGCAGAAGC ACCAGTGTAT GTGTGGAAAC ACCAACAATC ACCCAGAACA CGCAGGCCGG 2040
ATCCAGAGCA TTTGGTCCCG GCTGCAGGAG ACCGGACTGA GAGCGCAGTG TGAGTGTATC 2100
CGTGGGAGAA AGGCCACGCT GGAAGAGCTG CAGACGGTTC ACTCTGAAGC CCACGTTCTG 2160
CTCTATGGAA CGAACCCTCT CCGACAGAAA CTCGATTGTA GGCTATTACC AGGTTCAATC 2220
ACGCCGATGT TTGTACGGCT CCCGTGTGGC GGAATTGGGG TGGACAGTGA CACCATTTGG 2280
AACGAGGTCC ACTCCTCCAG TGCGGCTCGT CTCGCTGTGG GATCAGTGGT GGAATTGGTT 2340
TTCAAGGTGG CCACTCAGGA GCTGAAGAAT GGTTTTGCTG TGGTCCGGCC TCCTGGACAC 2400
CATGCAGAGG AAAGCACTCC GATGGGTTTC TGCTACTTCA ACTCCGTGGC CATCGCAGCC 2460
AAACTTCTGC AGCAGAGACT CAACATCAAC AAGATCCTCA TCGTGGACTG GGATGTTCAC 2520
CATGGCAACG GGACCCAGCA AGCTTTCTAT GATGACCCCA GTGTTCTTTA CCTGTCCATT 2580
CATCGCTATG ACGATGGTAA CTTTTTCCCT GGAAGCGGCG CACCCGATGA GGTTGGCAGC 2640
GGTCCTGGCG TCGGCTTCAA CGTCAATGTG GCGTTCACTG GAGGCCTGGA GCCCCCCATG 2700
AGTGACGCAG AGTACCTGGC TGCCTTCAGG TCGGTGGTGA TGCCAATAGC CAATGAATTT 2760
GCCCCGGACA TTGTGTTGGT CTCGTCTGGC TTCGACGCTG TTGAAGGACA CCCTCCACCA 2820
CTCGGCGGCT ACACTCTGAC AGCCAAGTGT TTCGGCTATC TGACAAGGCA GCTAATGACG 2880
CTCGCCGGAG GCCGATTGGT CTTGGCTCTG GAGGGTGGTC ATGACCTTAC CGCCATCTGT 2940
GACGCCTCTG AGGCCTGCTT GGCTGCACTG CTAGGCCAGG AGCTGGACCC ATTGCCAAAG 3000
TCCGTCCTTG AGCAGAGGCC CAATGTAAAT GCTGTTCGTT CCTTGGAGAA AGTTTTAGAA 3060
ATTCACAGTA AATACTGGCG CTCAGTCCAA CGCTACTCTC TGCATCTGGG TCTGTCTCTG 3120
CTGGAGGCCA AGCGTGGGGA CTCGGAGGAG GCCGAGGCCG TCAGCGCAAT GGCCTCCCTC 3180
TCTGTGGCTA ACACCAACGC CATGGACCAA AGCAGGTCTG AGGAGGAACC AATGGAAGAG 3240
GAGGAACCAC TGTAA 3256
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ten-0099 ENSTNIP00000000138.1 Tetraodon nigroviridis 92 0.0 1458
WERAM-Orn-0012 ENSONIP00000001222.1 Oreochromis niloticus 85 0.0 1347
WERAM-Xim-0085 ENSXMAP00000008038.1 Xiphophorus maculatus 83 0.0 1321
WERAM-Pof-0042 ENSPFOP00000003781.2 Poecilia formosa 86 0.0 1318
WERAM-Gaa-0148 ENSGACP00000019223.1 Gasterosteus aculeatus 86 0.0 1239
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 72 0.0 1168
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 73 0.0 1136
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 68 0.0 1096
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 68 0.0 1095
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 67 0.0 1095
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 68 0.0 1088
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 65 0.0 1085
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 71 0.0 1084
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 68 0.0 1083
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 68 0.0 1083
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 67 0.0 1082
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 71 0.0 1080
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 64 0.0 1073
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 69 0.0 1056
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 64 0.0 1032
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 67 0.0 1020
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 66 0.0 1020
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 65 0.0 1003
WERAM-Poa-0116 ENSPPYP00000014905.2 Pongo abelii 65 0.0 997
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 71 0.0 801
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 83 0.0 773
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 82 0.0 770
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 83 0.0 769
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 83 0.0 769
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 82 0.0 768
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 82 0.0 767
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 82 0.0 762
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 82 0.0 762
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 82 0.0 762
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 82 0.0 762
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 82 0.0 758
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 82 0.0 755
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 82 0.0 755
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 81 0.0 751
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 81 0.0 741
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 80 0.0 729
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 85 0.0 723
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 78 0.0 707
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 76 0.0 689
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 75 0.0 661
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 69 0.0 651
WERAM-Eqc-0174 ENSECAP00000019543.1 Equus caballus 74 0.0 636
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 75 0.0 636
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 75 0.0 635
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 75 0.0 635
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 75 0.0 635
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 75 0.0 634
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 74 5e-178 622
WERAM-Nol-0194 ENSNLEP00000021748.1 Nomascus leucogenys 74 5e-176 616
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 71 2e-175 614
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 72 1e-170 598
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 74 3e-168 590
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 72 2e-167 587
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 66 1e-158 558
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 72 4e-150 530
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 59 6e-148 523
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 61 2e-140 497
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 52 3e-124 444
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 73 3e-123 441
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 51 2e-116 417
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 64 6e-116 416
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 56 9e-89 326
WERAM-Bro-0168 Bo9g014470.1 Brassica oleracea 43 7e-79 293
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 43 1e-78 292
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 45 9e-78 289
Created Date 25-Jun-2016