Tag |
Content |
WERAM ID |
WERAM-Prc-0016 |
Ensembl Protein ID |
ENSPCAP00000001410.1 |
Gene Name |
HDAC10 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
1.60e-99 |
332.9 |
3 |
577 |
HDAC |
Class-I |
1.30e-21 |
77.1 |
25 |
246 |
|
Organism |
Procavia capensis |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeelesltvdsd 90 ++lvy+e m+ + l++ e+++E+peR++ +l++l+++gl +++++l ar+a++ el+lvHs e+v +++ ++ l ++el++l+ ++d ENSPCAP00000001410.1 3 TALVYHEDMTVPRLLWDAPECEMECPERLTVVLEHLRQRGLEQRCLRLVAREASEAELALVHSPEYVAMVQGTHALCTRELQALSAQYD 91 689************************************************************************************** PP class-2.txt 91 siylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtq 179 s+y+++ ++++arla+Ga+l+lvd+vl+g + ng+a+vRPPGHH+++++a+GFC+fnnva+aa++++qk+ +++ilivDwD+HhG+Gtq ENSPCAP00000001410.1 92 SVYFHPGTFHSARLAAGAALQLVDAVLTGAAPNGIALVRPPGHHSQQAAANGFCVFNNVAIAAEHAKQKHGLHRILIVDWDIHHGQGTQ 180 ***************************************************************************************** PP class-2.txt 180 eifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiake 251 if++dp+vly+S+HRy++g+f+p++ ++++devg+g+g+gf+vN++wn+ +m +a+ylaaf +v+lp+a e ENSPCAP00000001410.1 181 YIFEDDPSVLYFSWHRYEHGRFWPHLRESDADEVGQGRGCGFTVNLPWNQVGMENADYLAAFLHVLLPLAFE 252 ********************************************************************9976 PP class-2.txt 100 kaarlavGavlelvdkvlkgelkngfav 127 + a + G vl+lvd++l+g+++ g+a+ ENSPCAP00000001410.1 451 DKALTVLGKVLDLVDRILDGQVSGGLAA 478 4567778***************999985 PP class-2.txt 243 evvlpiakeFkPdlvlvsaG 262 +vlp+a+ F+Pdlvlv+ G ENSPCAP00000001410.1 558 GLVLPLAYGFQPDLVLVALG 577 589**************988 PP
HDAC Class-I
class-1.txt 21 pmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfd.glfeycqlitGa 108 p+rl+++ e + + gl+++ ++ +++as +el+ +hs ey+ +++ ++ ++el+ + ++d+ f+ g f+ ++l +Ga ENSPCAP00000001410.1 25 MECPERLTVVLEHLRQRGLEQRCLRLVAREASEAELALVHSPEYVAMVQGTHAL----CTRELQALSAQYDSVYFHpGTFHSARLAAGA 109 45699***999999********************************99876655....556666777777777775499********** PP class-1.txt 109 sleaakkLnkkeadiainw.aGGlhhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdrvmtvsfhkyg 194 +l+ ++ + ++ a +i hh+++ a Gfc n++ +a + ++kh +r+l +d d+hhG g + f+ v+ s h+y+ ENSPCAP00000001410.1 110 ALQLVDAVLTGAAPNGIALvRPPGHHSQQAAANGFCVFNNVAIAAEHAKQKHglHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYE 198 *****99998887655554133459********************9998876448*********************************9 PP class-1.txt 195 ee.ffPg..tGdlsdvgaekgkyyavnvPlkd.gidDesyekifksvi 238 ++ f+P d ++vg+++g ++vn+P ++ g+++ y + f +v+ ENSPCAP00000001410.1 199 HGrFWPHlrESDADEVGQGRGCGFTVNLPWNQvGMENADYLAAFLHVL 246 85388963357899***************9765999999988887776 PP
|
Protein Sequence (Fasta) | MGTALVYHED MTVPRLLWDA PECEMECPER LTVVLEHLRQ RGLEQRCLRL VAREASEAEL 60 ALVHSPEYVA MVQGTHALCT RELQALSAQY DSVYFHPGTF HSARLAAGAA LQLVDAVLTG 120 AAPNGIALVR PPGHHSQQAA ANGFCVFNNV AIAAEHAKQK HGLHRILIVD WDIHHGQGTQ 180 YIFEDDPSVL YFSWHRYEHG RFWPHLRESD ADEVGQGRGC GFTVNLPWNQ VGMENADYLA 240 AFLHVLLPLA FEXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 300 XXXXXXXXXX XXXXXXXXXX XXXXPAPPLP GTMVPCSSAL ESIQRVRAAQ APHWKSLQHQ 360 DTAPLLSPSA GSPEGRPLSP PPWDPACEAA TALSSLLERL RLHPLPPVRT AVALTADAAL 420 VLPPGVLRQG GSAPREETEA WARPHEALAQ DKALTVLGKV LDLVDRILDG QVSGGLAATP 480 ALAIAATLDV AIRRGLYLGA QRLLCVAVGQ LERPPDLSDD GRTLWLNLGS QEAAALSMFH 540 ISVPLSGASG GLLSWVLGLV LPLAYGFQPD LVLVALGPAH GLQDTHGALL ASMLRGPSGG 600 RVLVLVQESK PQLTGALARA LHGEATPSLG SCLVASFEDT QALKHLREQL EPKWRMLQHH 660 LEG 663Protein Fasta Sequence
>ENSPCAP00000001410.1|Class-I|Procavia capensis MGTALVYHEDMTVPRLLWDAPECEMECPERLTVVLEHLRQRGLEQRCLRLVAREASEAELALVHSPEYVAMVQGTHALCTRELQALSAQYDSVYFHPGTFHSARLAAGAALQLVDAVLTGAAPNGIALVRPPGHHSQQAAANGFCVFNNVAIAAEHAKQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPHLRESDADEVGQGRGCGFTVNLPWNQVGMENADYLAAFLHVLLPLAFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPPLPGTMVPCSSALESIQRVRAAQAPHWKSLQHQDTAPLLSPSAGSPEGRPLSPPPWDPACEAATALSSLLERLRLHPLPPVRTAVALTADAALVLPPGVLRQGGSAPREETEAWARPHEALAQDKALTVLGKVLDLVDRILDGQVSGGLAATPALAIAATLDVAIRRGLYLGAQRLLCVAVGQLERPPDLSDDGRTLWLNLGSQEAAALSMFHISVPLSGASGGLLSWVLGLVLPLAYGFQPDLVLVALGPAHGLQDTHGALLASMLRGPSGGRVLVLVQESKPQLTGALARALHGEATPSLGSCLVASFEDTQALKHLREQLEPKWRMLQHHLEG
|
Nucleotide Sequence (Fasta) | ATGGGGACAG CGCTTGTGTA CCACGAGGAC ATGACTGTCC CCCGTCTCCT CTGGGACGCC 60 CCCGAATGTG AGATGGAGTG TCCCGAGCGG CTGACCGTAG TCCTGGAGCA CCTGCGGCAG 120 CGTGGTCTGG AGCAGAGGTG CTTGCGGCTG GTGGCTCGCG AGGCCTCCGA GGCGGAGTTG 180 GCCCTGGTGC ACAGTCCAGA GTATGTGGCC ATGGTGCAGG GGACCCACGC CCTGTGCACA 240 CGGGAGCTCC AGGCACTGTC TGCACAATAT GACTCGGTCT ACTTCCACCC GGGCACCTTC 300 CACTCTGCCC GGCTGGCTGC AGGGGCAGCG CTGCAGCTGG TGGACGCGGT GCTGACAGGG 360 GCTGCACCCA ACGGGATTGC TCTGGTGAGG CCTCCCGGTC ACCATAGCCA GCAGGCCGCT 420 GCCAATGGGT TCTGTGTGTT CAACAATGTG GCCATAGCAG CTGAACACGC CAAGCAAAAA 480 CATGGGCTGC ACAGAATCCT CATCGTTGAC TGGGATATCC ATCACGGCCA GGGCACCCAG 540 TACATCTTTG AGGACGACCC CAGTGTCCTC TACTTCTCCT GGCACCGCTA TGAGCACGGG 600 CGCTTCTGGC CTCACCTGCG AGAGTCAGAT GCTGACGAGG TCGGCCAGGG CCGCGGCTGC 660 GGCTTCACAG TCAACCTGCC CTGGAACCAG GTCGGGATGG AAAACGCTGA CTATCTGGCA 720 GCTTTCCTGC ACGTGCTGCT CCCCCTGGCC TTTGAGNNNN NNNNNNNNNN NNNNNNNNNN 780 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 840 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 900 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 960 NNNNNNNNNN NNCCTGCCCC ACCTCTGCCA GGGACCATGG TGCCATGCAG TAGTGCCCTG 1020 GAGTCCATCC AGCGCGTCCG GGCGGCCCAG GCCCCTCACT GGAAAAGCCT CCAGCACCAG 1080 GACACAGCTC CTCTGCTGAG TCCCAGCGCT GGGTCCCCAG AGGGGAGGCC CCTGTCCCCG 1140 CCACCTTGGG ACCCTGCGTG TGAAGCAGCC ACAGCACTGA GTTCCCTCCT GGAGAGGCTG 1200 CGTCTCCATC CCCTGCCGCC GGTCCGCACG GCCGTTGCCC TGACCGCTGA TGCTGCTCTG 1260 GTCCTGCCCC CCGGTGTCCT CCGTCAGGGA GGGTCTGCCC CCAGGGAGGA GACTGAGGCC 1320 TGGGCCAGGC CCCATGAGGC TCTGGCCCAG GACAAGGCCC TCACTGTGCT CGGGAAGGTC 1380 CTAGATCTCG TGGACCGGAT CCTGGATGGG CAGGTGAGCG GTGGCCTCGC TGCCACCCCT 1440 GCCCTTGCCA TTGCTGCCAC CCTGGACGTT GCCATCCGGC GTGGCCTGTA CCTTGGGGCC 1500 CAAAGGCTGC TCTGTGTGGC CGTGGGACAG CTGGAAAGGC CCCCAGACCT CTCCGATGAT 1560 GGGAGGACTC TGTGGCTGAA CCTCGGGAGC CAGGAGGCAG CAGCTCTATC CATGTTTCAC 1620 ATCTCTGTGC CACTGTCAGG GGCAAGTGGG GGGCTCCTAA GCTGGGTCTT GGGCCTGGTG 1680 CTGCCCCTAG CCTATGGTTT CCAGCCTGAC CTGGTGCTGG TGGCGCTGGG ACCAGCCCAT 1740 GGCCTGCAGG ACACTCACGG TGCACTTCTG GCCTCGATGC TTAGGGGACC ATCAGGGGGC 1800 CGAGTCCTGG TGCTGGTGCA GGAGTCCAAA CCCCAGCTCA CAGGAGCTCT GGCCAGGGCG 1860 CTGCATGGAG AGGCAACCCC TAGCCTGGGC TCCTGCTTGG TGGCCTCATT CGAGGACACA 1920 CAGGCTCTGA AGCACCTGAG AGAGCAGCTG GAGCCGAAGT GGAGGATGCT GCAGCATCAC 1980 CTGGAAGGCT GA
1993Nucleotide Fasta Sequence
>ENSPCAP00000001410.1|Class-I|Procavia capensis ATGGGGACAGCGCTTGTGTACCACGAGGACATGACTGTCCCCCGTCTCCTCTGGGACGCCCCCGAATGTGAGATGGAGTGTCCCGAGCGGCTGACCGTAGTCCTGGAGCACCTGCGGCAGCGTGGTCTGGAGCAGAGGTGCTTGCGGCTGGTGGCTCGCGAGGCCTCCGAGGCGGAGTTGGCCCTGGTGCACAGTCCAGAGTATGTGGCCATGGTGCAGGGGACCCACGCCCTGTGCACACGGGAGCTCCAGGCACTGTCTGCACAATATGACTCGGTCTACTTCCACCCGGGCACCTTCCACTCTGCCCGGCTGGCTGCAGGGGCAGCGCTGCAGCTGGTGGACGCGGTGCTGACAGGGGCTGCACCCAACGGGATTGCTCTGGTGAGGCCTCCCGGTCACCATAGCCAGCAGGCCGCTGCCAATGGGTTCTGTGTGTTCAACAATGTGGCCATAGCAGCTGAACACGCCAAGCAAAAACATGGGCTGCACAGAATCCTCATCGTTGACTGGGATATCCATCACGGCCAGGGCACCCAGTACATCTTTGAGGACGACCCCAGTGTCCTCTACTTCTCCTGGCACCGCTATGAGCACGGGCGCTTCTGGCCTCACCTGCGAGAGTCAGATGCTGACGAGGTCGGCCAGGGCCGCGGCTGCGGCTTCACAGTCAACCTGCCCTGGAACCAGGTCGGGATGGAAAACGCTGACTATCTGGCAGCTTTCCTGCACGTGCTGCTCCCCCTGGCCTTTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGCCCCACCTCTGCCAGGGACCATGGTGCCATGCAGTAGTGCCCTGGAGTCCATCCAGCGCGTCCGGGCGGCCCAGGCCCCTCACTGGAAAAGCCTCCAGCACCAGGACACAGCTCCTCTGCTGAGTCCCAGCGCTGGGTCCCCAGAGGGGAGGCCCCTGTCCCCGCCACCTTGGGACCCTGCGTGTGAAGCAGCCACAGCACTGAGTTCCCTCCTGGAGAGGCTGCGTCTCCATCCCCTGCCGCCGGTCCGCACGGCCGTTGCCCTGACCGCTGATGCTGCTCTGGTCCTGCCCCCCGGTGTCCTCCGTCAGGGAGGGTCTGCCCCCAGGGAGGAGACTGAGGCCTGGGCCAGGCCCCATGAGGCTCTGGCCCAGGACAAGGCCCTCACTGTGCTCGGGAAGGTCCTAGATCTCGTGGACCGGATCCTGGATGGGCAGGTGAGCGGTGGCCTCGCTGCCACCCCTGCCCTTGCCATTGCTGCCACCCTGGACGTTGCCATCCGGCGTGGCCTGTACCTTGGGGCCCAAAGGCTGCTCTGTGTGGCCGTGGGACAGCTGGAAAGGCCCCCAGACCTCTCCGATGATGGGAGGACTCTGTGGCTGAACCTCGGGAGCCAGGAGGCAGCAGCTCTATCCATGTTTCACATCTCTGTGCCACTGTCAGGGGCAAGTGGGGGGCTCCTAAGCTGGGTCTTGGGCCTGGTGCTGCCCCTAGCCTATGGTTTCCAGCCTGACCTGGTGCTGGTGGCGCTGGGACCAGCCCATGGCCTGCAGGACACTCACGGTGCACTTCTGGCCTCGATGCTTAGGGGACCATCAGGGGGCCGAGTCCTGGTGCTGGTGCAGGAGTCCAAACCCCAGCTCACAGGAGCTCTGGCCAGGGCGCTGCATGGAGAGGCAACCCCTAGCCTGGGCTCCTGCTTGGTGGCCTCATTCGAGGACACACAGGCTCTGAAGCACCTGAGAGAGCAGCTGGAGCCGAAGTGGAGGATGCTGCAGCATCACCTGGAAGGCTGA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |