Tag |
Content |
WERAM ID |
WERAM-Leo-0157 |
Ensembl Protein ID |
ENSLOCP00000018907.1 |
Gene Name |
hdac10 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
6.80e-114 |
380.5 |
28 |
639 |
HDAC |
Class-I |
1.90e-27 |
96.8 |
31 |
298 |
|
Organism |
Lepisosteus oculatus |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeelesltvdsd 90 ++l+yde+m++ + l+ + ++ +E+peR++a++s+lq++gl+++++ + + + l+ +e++e ++++ ++ eel+++t +++ ENSLOCP00000018907.1 28 TALIYDEEMTNYKLLWVDPACSIETPERLTASHSALQSQGLAQRCVPAT--LTVYKAVILITGKEYLEAVKKTPGMTLEELKTFTLQYG 114 689*****************************************97654..455667888899************************** PP class-2.txt 91 siylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtq 179 ++y++++ +++a+lavGavl+lvd+v++g+++ng+a+vRPPGHH+++s a+GFC+fnnva+a+ +++++++++++livDwD+HhG+G+q ENSLOCP00000018907.1 115 DVYFHPNIYHCAKLAVGAVLQLVDSVMTGQVRNGMALVRPPGHHSQRSVANGFCVFNNVAIAVLYAKKNFNINRVLIVDWDIHHGQGIQ 203 ***************************************************************************************** PP class-2.txt 180 eifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaeg 268 +f++dp+vly+S+HRy++ +f+p++ ++++d+vg+gkg gfn+N++wn+ +m +a+yl +f +v+lpia+eF+Pdlv+vsaGfD+a g ENSLOCP00000018907.1 204 YLFEEDPSVLYFSWHRYEHQKFWPNLSESDYDTVGTGKGAGFNINLPWNKVGMENADYLSVFFHVLLPIAYEFSPDLVMVSAGFDSAVG 292 ***************************************************************************************** PP class-2.txt 269 dplgglsvtakcyatltkqllklaggrvvlvlEGG 303 dp+g+++ t++ +a+lt+ l+ laggr+++vlE G ENSLOCP00000018907.1 293 DPEGHMCATPDVFAHLTHLLMPLAGGRLCVVLEVG 327 *********************************87 PP class-2.txt 235 aeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkqllklaggrvvlvlEGGynlka 308 a +l a +++pia+eF P+lvl + G + a+ a++t l++la+g++++++ G + k+ ENSLOCP00000018907.1 575 AGFLLAVLSLIVPIAYEFCPGLVLAALGEG---------SGIGAAVLAHFTSLLQGLAQGQLLCLIQEGSETKT 639 57899999****************988843.........3355677889999999*****98765544444444 PP
HDAC Class-I
class-1.txt 6 aydedvgeyhy....gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90 +yde++++y+ + p+rl+ h+ + + gl ++ v ++ + ++ ++ +ey+e +kk + e elk f +++ ENSLOCP00000018907.1 31 IYDEEMTNYKLlwvdPACSIETPERLTASHSALQSQGLAQR--CVPATLTVYKAVILITGKEYLEAVKKTPGMTLE----ELKTFTLQY 113 56777777766333333344578888888888888888775..445556667777777888999888876665555....566777775 PP class-1.txt 91 .dcPvfdglfeycqlitGasleaakkLnkkeadiainw.aGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgv 175 d ++++ ++l Ga l+ ++ + +++ ++ hh+++s a Gfc n++ +a+l +k + +rvl +d d+hhG g+ ENSLOCP00000018907.1 114 gDVYFHPNIYHCAKLAVGAVLQLVDSVMTGQVRNGMALvRPPGHHSQRSVANGFCVFNNVAIAVLYAKKnfNINRVLIVDWDIHHGQGI 202 48888889******************999987755554134459*************************44457*************** PP class-1.txt 176 eeafyttdrvmtvsfhkyge.effPg..tGdlsdvgaekgkyyavnvPlkd.gidDesyekifksviskvieafePeavvlqcGaDsla 260 + f++ v+ s h+y++ +f+P d + vg++kg + +n+P ++ g+++ y ++f +v+ ++ f+P+ v++ G Ds ENSLOCP00000018907.1 203 QYLFEEDPSVLYFSWHRYEHqKFWPNlsESDYDTVGTGKGAGFNINLPWNKvGMENADYLSVFFHVLLPIAYEFSPDLVMVSAGFDSAV 291 ******************86269997225678899*************96549************************************ PP class-1.txt 261 gDrlgef 267 gD+ g+ ENSLOCP00000018907.1 292 GDPEGHM 298 **97765 PP
|
Protein Sequence (Fasta) | ITQAVLSVLY DCLWEELQTW SSEMASGTAL IYDEEMTNYK LLWVDPACSI ETPERLTASH 60 SALQSQGLAQ RCVPATLTVY KAVILITGKE YLEAVKKTPG MTLEELKTFT LQYGDVYFHP 120 NIYHCAKLAV GAVLQLVDSV MTGQVRNGMA LVRPPGHHSQ RSVANGFCVF NNVAIAVLYA 180 KKNFNINRVL IVDWDIHHGQ GIQYLFEEDP SVLYFSWHRY EHQKFWPNLS ESDYDTVGTG 240 KGAGFNINLP WNKVGMENAD YLSVFFHVLL PIAYEFSPDL VMVSAGFDSA VGDPEGHMCA 300 TPDVFAHLTH LLMPLAGGRL CVVLEVGVLS DIDAIKCIDM HLPNMSHSVL PSAVESIQNV 360 RAAHQQYWGC LKHIVCPGVQ SVSEPSTKRS RVGEGDEGVQ ETPDAKEAES WVGHYPEPPL 420 RVAPPTRTAV VLPADLEDLV PQSCQRVTGT PLRPEQAALG LSQARAKGKS TAAQFNSVSH 480 MNAPAYQRKI MLNLTMFLGL MVLFSIFFIC LFLHFISNLV YGQCYGFPGC IELFVKVKDH 540 GKIVIVAVSD LTGFKCQSSF LCIIREPISK AQDPAGFLLA VLSLIVPIAY EFCPGLVLAA 600 LGEGSGIGAA VLAHFTSLLQ GLAQGQLLCL IQEGSETKTL QTTSASLLGE PAPYLGSLAP 660 ALPENSQAVE RQRRRLQTHW RMLQTAGEE 689Protein Fasta Sequence
>ENSLOCP00000018907.1|Class-I|Lepisosteus oculatus ITQAVLSVLYDCLWEELQTWSSEMASGTALIYDEEMTNYKLLWVDPACSIETPERLTASHSALQSQGLAQRCVPATLTVYKAVILITGKEYLEAVKKTPGMTLEELKTFTLQYGDVYFHPNIYHCAKLAVGAVLQLVDSVMTGQVRNGMALVRPPGHHSQRSVANGFCVFNNVAIAVLYAKKNFNINRVLIVDWDIHHGQGIQYLFEEDPSVLYFSWHRYEHQKFWPNLSESDYDTVGTGKGAGFNINLPWNKVGMENADYLSVFFHVLLPIAYEFSPDLVMVSAGFDSAVGDPEGHMCATPDVFAHLTHLLMPLAGGRLCVVLEVGVLSDIDAIKCIDMHLPNMSHSVLPSAVESIQNVRAAHQQYWGCLKHIVCPGVQSVSEPSTKRSRVGEGDEGVQETPDAKEAESWVGHYPEPPLRVAPPTRTAVVLPADLEDLVPQSCQRVTGTPLRPEQAALGLSQARAKGKSTAAQFNSVSHMNAPAYQRKIMLNLTMFLGLMVLFSIFFICLFLHFISNLVYGQCYGFPGCIELFVKVKDHGKIVIVAVSDLTGFKCQSSFLCIIREPISKAQDPAGFLLAVLSLIVPIAYEFCPGLVLAALGEGSGIGAAVLAHFTSLLQGLAQGQLLCLIQEGSETKTLQTTSASLLGEPAPYLGSLAPALPENSQAVERQRRRLQTHWRMLQTAGEE
|
Nucleotide Sequence (Fasta) | ATTACGCAGG CGGTGCTTTC AGTTTTATAC GATTGCCTGT GGGAAGAATT ACAGACTTGG 60 TCTTCAGAAA TGGCATCGGG GACTGCACTA ATTTATGATG AAGAAATGAC AAACTACAAA 120 CTGCTCTGGG TTGACCCAGC ATGTAGCATT GAGACCCCAG AGCGTCTCAC TGCTTCGCAC 180 AGCGCGCTGC AGAGCCAGGG CCTGGCACAG AGGTGTGTCC CCGCGACGTT AACCGTTTAT 240 AAGGCTGTAA TCTTGATAAC TGGCAAGGAG TACTTGGAAG CTGTGAAAAA GACCCCTGGC 300 ATGACTCTGG AGGAGCTGAA GACTTTTACC TTGCAGTACG GGGATGTGTA CTTTCACCCG 360 AACATTTACC ACTGTGCCAA GCTGGCTGTG GGAGCTGTAC TGCAGCTGGT GGACAGTGTG 420 ATGACTGGGC AGGTCAGGAA TGGTATGGCC CTAGTGAGAC CTCCAGGACA TCACAGTCAG 480 CGCAGTGTTG CCAATGGCTT CTGTGTCTTC AATAATGTGG CCATTGCAGT GCTCTATGCC 540 AAGAAAAACT TCAACATCAA CAGAGTGCTG ATTGTGGATT GGGACATACA CCATGGACAG 600 GGTATCCAAT ACTTGTTCGA GGAGGACCCC AGTGTGTTGT ACTTCTCCTG GCACCGCTAT 660 GAGCACCAGA AGTTTTGGCC CAATCTGTCA GAGTCAGACT ATGACACGGT GGGGACAGGA 720 AAAGGAGCTG GATTCAACAT CAACCTGCCC TGGAACAAGG TTGGGATGGA GAATGCTGAT 780 TACCTCTCTG TCTTCTTCCA TGTCCTTCTG CCCATTGCAT ATGAGTTCAG CCCTGATTTG 840 GTCATGGTAT CAGCAGGGTT TGACTCAGCC GTTGGAGATC CGGAGGGGCA CATGTGTGCC 900 ACCCCAGATG TGTTTGCCCA CCTCACTCAC TTGCTGATGC CCCTGGCAGG AGGGAGGCTT 960 TGTGTTGTTC TGGAGGTTGG TGTGCTTTCT GATATAGATG CCATAAAGTG CATTGATATG 1020 CATCTTCCTA ATATGAGTCA CTCTGTCCTC CCCAGTGCTG TAGAATCCAT CCAGAATGTG 1080 AGGGCTGCAC ACCAGCAGTA CTGGGGCTGT CTCAAACATA TTGTCTGCCC AGGGGTACAG 1140 TCTGTCTCAG AGCCCAGCAC CAAGCGGAGC AGGGTGGGGG AGGGAGATGA GGGGGTCCAG 1200 GAGACCCCAG ATGCAAAGGA AGCAGAATCT TGGGTGGGCC ACTATCCAGA ACCCCCCCTG 1260 CGGGTCGCTC CCCCCACGAG GACAGCTGTG GTACTCCCTG CAGACTTGGA GGACTTAGTG 1320 CCGCAGAGCT GCCAGCGGGT TACGGGGACG CCTCTCAGGC CGGAGCAGGC CGCTCTGGGT 1380 CTCAGCCAAG CCAGGGCAAA AGGCAAGAGT ACTGCTGCCC AGTTTAACAG TGTGTCACAC 1440 ATGAATGCTC CTGCATATCA GAGAAAAATC ATGCTAAATC TTACAATGTT CTTAGGCCTA 1500 ATGGTTCTGT TTTCCATTTT CTTCATTTGT CTTTTTCTTC ATTTCATTTC TAATTTGGTT 1560 TATGGACAGT GTTATGGATT TCCTGGATGT ATTGAGCTTT TTGTGAAGGT AAAAGATCAT 1620 GGAAAAATTG TAATAGTTGC AGTCTCTGAT CTCACAGGAT TTAAATGTCA GTCTTCATTC 1680 CTGTGTATCA TCAGGGAGCC CATTTCCAAA GCACAAGATC CTGCAGGGTT CCTGCTGGCT 1740 GTGCTCAGTT TGATCGTACC CATAGCGTAC GAGTTCTGTC CTGGCCTGGT TTTGGCAGCA 1800 CTGGGTGAAG GCAGTGGTAT TGGTGCAGCT GTCCTGGCAC ATTTCACCAG CCTCCTGCAA 1860 GGCCTGGCTC AAGGTCAGCT ACTGTGTCTC ATACAGGAGG GCTCTGAGAC TAAAACCTTA 1920 CAAACTACCT CTGCCTCTCT GCTTGGGGAA CCTGCCCCAT ATCTGGGGTC CCTAGCACCT 1980 GCCCTTCCAG AGAACAGCCA GGCTGTAGAG AGACAAAGAC GGAGGCTTCA GACACACTGG 2040 AGGATGCTGC AGACTGCAGG TGAGGAG
2068Nucleotide Fasta Sequence
>ENSLOCP00000018907.1|Class-I|Lepisosteus oculatus ATTACGCAGGCGGTGCTTTCAGTTTTATACGATTGCCTGTGGGAAGAATTACAGACTTGGTCTTCAGAAATGGCATCGGGGACTGCACTAATTTATGATGAAGAAATGACAAACTACAAACTGCTCTGGGTTGACCCAGCATGTAGCATTGAGACCCCAGAGCGTCTCACTGCTTCGCACAGCGCGCTGCAGAGCCAGGGCCTGGCACAGAGGTGTGTCCCCGCGACGTTAACCGTTTATAAGGCTGTAATCTTGATAACTGGCAAGGAGTACTTGGAAGCTGTGAAAAAGACCCCTGGCATGACTCTGGAGGAGCTGAAGACTTTTACCTTGCAGTACGGGGATGTGTACTTTCACCCGAACATTTACCACTGTGCCAAGCTGGCTGTGGGAGCTGTACTGCAGCTGGTGGACAGTGTGATGACTGGGCAGGTCAGGAATGGTATGGCCCTAGTGAGACCTCCAGGACATCACAGTCAGCGCAGTGTTGCCAATGGCTTCTGTGTCTTCAATAATGTGGCCATTGCAGTGCTCTATGCCAAGAAAAACTTCAACATCAACAGAGTGCTGATTGTGGATTGGGACATACACCATGGACAGGGTATCCAATACTTGTTCGAGGAGGACCCCAGTGTGTTGTACTTCTCCTGGCACCGCTATGAGCACCAGAAGTTTTGGCCCAATCTGTCAGAGTCAGACTATGACACGGTGGGGACAGGAAAAGGAGCTGGATTCAACATCAACCTGCCCTGGAACAAGGTTGGGATGGAGAATGCTGATTACCTCTCTGTCTTCTTCCATGTCCTTCTGCCCATTGCATATGAGTTCAGCCCTGATTTGGTCATGGTATCAGCAGGGTTTGACTCAGCCGTTGGAGATCCGGAGGGGCACATGTGTGCCACCCCAGATGTGTTTGCCCACCTCACTCACTTGCTGATGCCCCTGGCAGGAGGGAGGCTTTGTGTTGTTCTGGAGGTTGGTGTGCTTTCTGATATAGATGCCATAAAGTGCATTGATATGCATCTTCCTAATATGAGTCACTCTGTCCTCCCCAGTGCTGTAGAATCCATCCAGAATGTGAGGGCTGCACACCAGCAGTACTGGGGCTGTCTCAAACATATTGTCTGCCCAGGGGTACAGTCTGTCTCAGAGCCCAGCACCAAGCGGAGCAGGGTGGGGGAGGGAGATGAGGGGGTCCAGGAGACCCCAGATGCAAAGGAAGCAGAATCTTGGGTGGGCCACTATCCAGAACCCCCCCTGCGGGTCGCTCCCCCCACGAGGACAGCTGTGGTACTCCCTGCAGACTTGGAGGACTTAGTGCCGCAGAGCTGCCAGCGGGTTACGGGGACGCCTCTCAGGCCGGAGCAGGCCGCTCTGGGTCTCAGCCAAGCCAGGGCAAAAGGCAAGAGTACTGCTGCCCAGTTTAACAGTGTGTCACACATGAATGCTCCTGCATATCAGAGAAAAATCATGCTAAATCTTACAATGTTCTTAGGCCTAATGGTTCTGTTTTCCATTTTCTTCATTTGTCTTTTTCTTCATTTCATTTCTAATTTGGTTTATGGACAGTGTTATGGATTTCCTGGATGTATTGAGCTTTTTGTGAAGGTAAAAGATCATGGAAAAATTGTAATAGTTGCAGTCTCTGATCTCACAGGATTTAAATGTCAGTCTTCATTCCTGTGTATCATCAGGGAGCCCATTTCCAAAGCACAAGATCCTGCAGGGTTCCTGCTGGCTGTGCTCAGTTTGATCGTACCCATAGCGTACGAGTTCTGTCCTGGCCTGGTTTTGGCAGCACTGGGTGAAGGCAGTGGTATTGGTGCAGCTGTCCTGGCACATTTCACCAGCCTCCTGCAAGGCCTGGCTCAAGGTCAGCTACTGTGTCTCATACAGGAGGGCTCTGAGACTAAAACCTTACAAACTACCTCTGCCTCTCTGCTTGGGGAACCTGCCCCATATCTGGGGTCCCTAGCACCTGCCCTTCCAGAGAACAGCCAGGCTGTAGAGAGACAAAGACGGAGGCTTCAGACACACTGGAGGATGCTGCAGACTGCAGGTGAGGAG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |