| Tag |
Content |
| WERAM ID |
WERAM-Ori-0019 |
| Ensembl Protein ID |
BGIOSGA006874-PA |
| Gene Name |
OsI_06366 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
2.40e-159 |
530.9 |
24 |
581 |
|
| Organism |
Oryza indica |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnygls..kkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvged 91
++v+y+yd++vg+y+ygq+hpmkp+r+++th L+ nygl k+e+++p a+ +l++fhs++y+ fl+ v+pe++ + l++fn+g d
BGIOSGA006874-PA 24 RRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLANYGLLapAKMEVLRPLPARGIDLCRFHSDDYVAFLRAVTPETQLGQVRALRRFNIGPD 116
589***********************************963369************************************************* PP
class-1.txt 92 cPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdr 184
cPvfdgl+ ycq+++Gas+ aa kLn+++ diainw+GGlhhakkseasGfcyvnDivlailellk h+rvlyidid+hhGDgveeafytt+r
BGIOSGA006874-PA 117 CPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVEEAFYTTNR 209
********************************************************************************************* PP
class-1.txt 185 vmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaec 277
vmtvsfhk+g+ +fPgtGd++d+g +gkyy++nvPl+dgidD+sy++ifk++i kv+e+++P avvlqcGaDsl+gDrlg+fnls kghaec
BGIOSGA006874-PA 210 VMTVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPIIGKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAEC 301
***********.********************************************************************************* PP
class-1.txt 278 vkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
vkf++sfn+pll+lGGGGYt+rnvaRcw+yet+v+l
BGIOSGA006874-PA 302 VKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVAL 337
*********************************986 PP
class-1.txt 62 eeyieflkkvepenaeelskelkkfnvgedcPvfdglfeyc 102
+++ ++l+k++ + + ++ l ++++g++ ++ ++++y
BGIOSGA006874-PA 541 QDHSDMLEKSSGWATMREMDMLLQYGLGNEVSILGDVYSYG 581
55667777777766666677899999999999999999996 PP
|
Protein Sequence
(Fasta) | MDPSSAGAGG NSLASASCGD AQKRRVCYFY DPEVGNYYYG QGHPMKPHRV RMTHALLANY 60
GLLAPAKMEV LRPLPARGID LCRFHSDDYV AFLRAVTPET QLGQVRALRR FNIGPDCPVF 120
DGLYAYCQTY AGASVGAAVK LNHGTHDIAI NWSGGLHHAK KSEASGFCYV NDIVLAILEL 180
LKLHERVLYI DIDIHHGDGV EEAFYTTNRV MTVSFHKFGD YFPGTGDIRD IGYSEGKYYC 240
LNVPLDDGID DDSYQSIFKP IIGKVMEMYR PGAVVLQCGA DSLSGDRLGC FNLSGKGHAE 300
CVKFMRSFNV PLLLLGGGGY TIRNVARCWC YETGVALGEE LQEKLPYNEY YEYFGPEYSL 360
YVAASNMENR NTNKQLEEIK CNILDNLSKL EHAPSVQFEE RIPETKLPEP DEDQEDPDER 420
HDPDSDMVLD DNKPTGHSAR SLIHNIGVKR EITETETKDQ HGKRLTTEHK GPEPMAEDLG 480
SSKQAPDVFD IAIDVVSALD YLHQHRPLPI IHCDLKPSNI FLDSEMVAYV GDFGLARVLH 540
QDHSDMLEKS SGWATMREMD MLLQYGLGNE VSILGDVYSY GILLLEMFTG KRPTGTEFKE 600
ALSLHNYVKM ALPDNVIDIA DQHFYQRTMM EKKETQMAKE QETQE 645Protein Fasta Sequence
>BGIOSGA006874-PA|Class-I|Oryza indica
MDPSSAGAGGNSLASASCGDAQKRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLANYGLLAPAKMEVLRPLPARGIDLCRFHSDDYVAFLRAVTPETQLGQVRALRRFNIGPDCPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFGDYFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPIIGKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGEELQEKLPYNEYYEYFGPEYSLYVAASNMENRNTNKQLEEIKCNILDNLSKLEHAPSVQFEERIPETKLPEPDEDQEDPDERHDPDSDMVLDDNKPTGHSARSLIHNIGVKREITETETKDQHGKRLTTEHKGPEPMAEDLGSSKQAPDVFDIAIDVVSALDYLHQHRPLPIIHCDLKPSNIFLDSEMVAYVGDFGLARVLHQDHSDMLEKSSGWATMREMDMLLQYGLGNEVSILGDVYSYGILLLEMFTGKRPTGTEFKEALSLHNYVKMALPDNVIDIADQHFYQRTMMEKKETQMAKEQETQE |
Nucleotide Sequence
(Fasta) | ATGGACCCCT CGTCGGCGGG CGCGGGCGGG AACTCGCTGG CGTCGGCGTC GTGCGGCGAC 60
GCGCAGAAGC GGCGGGTGTG CTACTTCTAC GACCCGGAGG TGGGCAACTA CTACTACGGG 120
CAGGGGCACC CGATGAAGCC CCACCGCGTG AGGATGACCC ACGCGCTGCT CGCCAACTAC 180
GGCCTCCTCG CCCCGGCCAA GATGGAGGTG CTCCGCCCGC TCCCCGCCCG CGGCATCGAC 240
CTCTGCCGCT TCCACTCCGA CGACTACGTC GCCTTCCTCC GCGCCGTCAC CCCGGAGACC 300
CAGCTCGGCC AGGTCCGCGC CCTCCGCCGC TTCAACATCG GCCCGGACTG CCCCGTCTTC 360
GACGGCCTCT ACGCCTACTG CCAGACCTAC GCGGGCGCCT CCGTCGGCGC CGCCGTCAAG 420
CTCAACCACG GCACCCACGA CATCGCCATC AACTGGTCCG GCGGCCTGCA CCACGCCAAG 480
AAGTCCGAGG CCTCCGGCTT CTGCTACGTC AACGACATCG TCCTCGCCAT CCTCGAGCTC 540
CTCAAGCTCC ATGAGCGAGT TCTGTATATT GATATTGATA TCCATCATGG AGATGGAGTT 600
GAGGAGGCGT TCTACACAAC AAACAGGGTT ATGACAGTCT CATTTCACAA GTTTGGGGAT 660
TATTTCCCGG GAACAGGGGA CATCCGCGAT ATTGGGTATT CAGAAGGGAA GTATTATTGC 720
CTGAATGTCC CGCTGGATGA TGGGATTGAT GATGACAGCT ACCAGTCCAT CTTCAAGCCG 780
ATCATCGGCA AAGTCATGGA GATGTATCGT CCTGGTGCAG TTGTGCTTCA GTGTGGCGCT 840
GATTCGTTGT CCGGTGATAG GTTGGGCTGT TTCAATCTCT CGGGGAAAGG TCATGCTGAA 900
TGTGTTAAGT TCATGAGGTC TTTCAATGTT CCGTTGCTTC TTCTTGGTGG TGGTGGATAT 960
ACCATAAGAA ATGTTGCACG CTGCTGGTGT TACGAGACAG GAGTTGCGCT TGGTGAAGAG 1020
CTACAGGAGA AGTTGCCTTA CAACGAGTAC TATGAATATT TTGGTCCAGA ATACAGTCTT 1080
TACGTTGCAG CAAGTAATAT GGAGAACAGA AATACAAACA AGCAACTGGA GGAAATAAAA 1140
TGCAATATTC TGGACAATCT TTCAAAACTT GAACATGCTC CTAGCGTCCA ATTTGAAGAG 1200
CGAATTCCTG AAACAAAGCT ACCTGAGCCA GATGAAGATC AAGAGGATCC AGATGAAAGG 1260
CACGACCCTG ACTCTGATAT GGTGTTGGAT GATAACAAAC CTACGGGACA CTCAGCAAGA 1320
AGCCTTATTC ACAACATCGG AGTAAAGAGA GAAATTACTG AAACAGAGAC CAAAGATCAG 1380
CATGGTAAGA GATTAACAAC CGAACATAAA GGACCAGAAC CGATGGCAGA GGATCTTGGT 1440
TCCTCCAAGC AAGCTCCTGA TGTGTTCGAC ATTGCCATTG ATGTGGTTTC AGCACTTGAT 1500
TATCTTCACC AACATAGGCC ATTGCCAATT ATTCACTGTG ATCTCAAGCC AAGCAATATT 1560
TTCCTAGATA GTGAAATGGT TGCTTACGTT GGTGATTTTG GGCTTGCAAG AGTCCTGCAT 1620
CAAGACCATA GTGACATGTT AGAGAAATCA AGTGGCTGGG CTACAATGAG AGAAATGGAT 1680
ATGCTGCTCC AGTACGGTTT GGGCAATGAG GTTTCAATTC TGGGTGATGT CTACAGCTAT 1740
GGTATACTGT TGCTGGAGAT GTTTACCGGA AAAAGACCAA CTGGCACTGA ATTTAAAGAA 1800
GCTCTCAGCC TTCATAATTA TGTAAAGATG GCACTTCCAG ACAATGTGAT CGATATTGCG 1860
GACCAACACT TCTATCAGAG AACAATGATG GAGAAGAAAG AAACTCAGAT GGCAAAAGAA 1920
CAAGAGACAC AAGAATAG
1939Nucleotide Fasta Sequence
>BGIOSGA006874-PA|Class-I|Oryza indica
ATGGACCCCTCGTCGGCGGGCGCGGGCGGGAACTCGCTGGCGTCGGCGTCGTGCGGCGACGCGCAGAAGCGGCGGGTGTGCTACTTCTACGACCCGGAGGTGGGCAACTACTACTACGGGCAGGGGCACCCGATGAAGCCCCACCGCGTGAGGATGACCCACGCGCTGCTCGCCAACTACGGCCTCCTCGCCCCGGCCAAGATGGAGGTGCTCCGCCCGCTCCCCGCCCGCGGCATCGACCTCTGCCGCTTCCACTCCGACGACTACGTCGCCTTCCTCCGCGCCGTCACCCCGGAGACCCAGCTCGGCCAGGTCCGCGCCCTCCGCCGCTTCAACATCGGCCCGGACTGCCCCGTCTTCGACGGCCTCTACGCCTACTGCCAGACCTACGCGGGCGCCTCCGTCGGCGCCGCCGTCAAGCTCAACCACGGCACCCACGACATCGCCATCAACTGGTCCGGCGGCCTGCACCACGCCAAGAAGTCCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAGCTCCATGAGCGAGTTCTGTATATTGATATTGATATCCATCATGGAGATGGAGTTGAGGAGGCGTTCTACACAACAAACAGGGTTATGACAGTCTCATTTCACAAGTTTGGGGATTATTTCCCGGGAACAGGGGACATCCGCGATATTGGGTATTCAGAAGGGAAGTATTATTGCCTGAATGTCCCGCTGGATGATGGGATTGATGATGACAGCTACCAGTCCATCTTCAAGCCGATCATCGGCAAAGTCATGGAGATGTATCGTCCTGGTGCAGTTGTGCTTCAGTGTGGCGCTGATTCGTTGTCCGGTGATAGGTTGGGCTGTTTCAATCTCTCGGGGAAAGGTCATGCTGAATGTGTTAAGTTCATGAGGTCTTTCAATGTTCCGTTGCTTCTTCTTGGTGGTGGTGGATATACCATAAGAAATGTTGCACGCTGCTGGTGTTACGAGACAGGAGTTGCGCTTGGTGAAGAGCTACAGGAGAAGTTGCCTTACAACGAGTACTATGAATATTTTGGTCCAGAATACAGTCTTTACGTTGCAGCAAGTAATATGGAGAACAGAAATACAAACAAGCAACTGGAGGAAATAAAATGCAATATTCTGGACAATCTTTCAAAACTTGAACATGCTCCTAGCGTCCAATTTGAAGAGCGAATTCCTGAAACAAAGCTACCTGAGCCAGATGAAGATCAAGAGGATCCAGATGAAAGGCACGACCCTGACTCTGATATGGTGTTGGATGATAACAAACCTACGGGACACTCAGCAAGAAGCCTTATTCACAACATCGGAGTAAAGAGAGAAATTACTGAAACAGAGACCAAAGATCAGCATGGTAAGAGATTAACAACCGAACATAAAGGACCAGAACCGATGGCAGAGGATCTTGGTTCCTCCAAGCAAGCTCCTGATGTGTTCGACATTGCCATTGATGTGGTTTCAGCACTTGATTATCTTCACCAACATAGGCCATTGCCAATTATTCACTGTGATCTCAAGCCAAGCAATATTTTCCTAGATAGTGAAATGGTTGCTTACGTTGGTGATTTTGGGCTTGCAAGAGTCCTGCATCAAGACCATAGTGACATGTTAGAGAAATCAAGTGGCTGGGCTACAATGAGAGAAATGGATATGCTGCTCCAGTACGGTTTGGGCAATGAGGTTTCAATTCTGGGTGATGTCTACAGCTATGGTATACTGTTGCTGGAGATGTTTACCGGAAAAAGACCAACTGGCACTGAATTTAAAGAAGCTCTCAGCCTTCATAATTATGTAAAGATGGCACTTCCAGACAATGTGATCGATATTGCGGACCAACACTTCTATCAGAGAACAATGATGGAGAAGAAAGAAACTCAGATGGCAAAAGAACAAGAGACACAAGAATAG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
