Tag |
Content |
WERAM ID |
WERAM-Orbr-0024 |
Ensembl Protein ID |
OB02G17760.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
2.80e-161 |
536.9 |
24 |
335 |
|
Organism |
Oryza brachyantha |
Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdg 97 ++v+y+yd++vg+y+ygq+hpmkp+r+++th L+ +ygl ++++++p +a +++++fhs +y+ fl++v+pe++ ++l++fnvgedcPvfdg OB02G17760.1 24 RRVCYFYDTEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLGRMQVLRPLRALDHDFCRFHSADYVAFLRTVTPETQLGRGRQLRRFNVGEDCPVFDG 120 589********************************************************************************************** PP class-1.txt 98 lfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkyg 194 l+ ycq ++Gas++aa Ln+++ diainw+GGlhhakkseasGfcyvnDivlailellk h+rvlyidid+hhGDgveeafytt+rvmtvsfhk+g OB02G17760.1 121 LYAYCQSYAGASISAAVMLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKVHERVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFG 217 ************************************************************************************************* PP class-1.txt 195 eeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllvl 291 e +fPgtGd++d+g +gkyy++nvPl+dgidD+sy++ifk++i kv+e+++P+avvlqcGaDsl+gDrlg+fnls kghaecvk+++sfn+pll+l OB02G17760.1 218 E-YFPGTGDIRDIGYAEGKYYCLNVPLDDGIDDDSYQSIFKPIIGKVMEMYHPDAVVLQCGADSLSGDRLGCFNLSGKGHAECVKYMRSFNVPLLLL 313 *.*********************************************************************************************** PP class-1.txt 292 GGGGYtlrnvaRcwtyetavvl 313 GGGGYt+rnv+Rcw+yet+v++ OB02G17760.1 314 GGGGYTIRNVSRCWCYETGVAV 335 *******************986 PP
|
Protein Sequence (Fasta) | MDPSSAGSGG NSLAAVAGTD AQKRRVCYFY DTEVGNYYYG QGHPMKPHRV RMTHALLAHY 60 GLLGRMQVLR PLRALDHDFC RFHSADYVAF LRTVTPETQL GRGRQLRRFN VGEDCPVFDG 120 LYAYCQSYAG ASISAAVMLN HGTHDIAINW SGGLHHAKKS EASGFCYVND IVLAILELLK 180 VHERVLYIDI DIHHGDGVEE AFYTTNRVMT VSFHKFGEYF PGTGDIRDIG YAEGKYYCLN 240 VPLDDGIDDD SYQSIFKPII GKVMEMYHPD AVVLQCGADS LSGDRLGCFN LSGKGHAECV 300 KYMRSFNVPL LLLGGGGYTI RNVSRCWCYE TGVAVGEELK EKLPYNEYYE YFGPEYSLYV 360 SSSNMENRNT NKQLEEMKCK ILENLSKVEH APSVQFEERI PERKLPERDE DKEDPDRRPD 420 PYFDRFLSAR RRLKHSARSR NTGDTREYTE TEAKDQHGKI PTTEHRGPEP MEEDLGSSKQ 480 APPADANGMA INAPGNVKNE PESSPK 506Protein Fasta Sequence
>OB02G17760.1|Class-I|Oryza brachyantha MDPSSAGSGGNSLAAVAGTDAQKRRVCYFYDTEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLGRMQVLRPLRALDHDFCRFHSADYVAFLRTVTPETQLGRGRQLRRFNVGEDCPVFDGLYAYCQSYAGASISAAVMLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKVHERVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFGEYFPGTGDIRDIGYAEGKYYCLNVPLDDGIDDDSYQSIFKPIIGKVMEMYHPDAVVLQCGADSLSGDRLGCFNLSGKGHAECVKYMRSFNVPLLLLGGGGYTIRNVSRCWCYETGVAVGEELKEKLPYNEYYEYFGPEYSLYVSSSNMENRNTNKQLEEMKCKILENLSKVEHAPSVQFEERIPERKLPERDEDKEDPDRRPDPYFDRFLSARRRLKHSARSRNTGDTREYTETEAKDQHGKIPTTEHRGPEPMEEDLGSSKQAPPADANGMAINAPGNVKNEPESSPK
|
Nucleotide Sequence (Fasta) | ATGGATCCCT CGTCGGCGGG CTCCGGCGGC AACTCGCTGG CGGCGGTGGC GGGGACGGAC 60 GCCCAGAAGC GGCGGGTGTG CTACTTCTAC GACACGGAGG TGGGCAACTA CTACTACGGG 120 CAGGGCCACC CGATGAAGCC CCACCGCGTG CGGATGACCC ACGCGCTGCT CGCCCACTAC 180 GGCCTCCTCG GCCGGATGCA GGTGCTCCGC CCGCTCCGCG CCCTCGACCA CGACTTCTGC 240 CGCTTCCACT CCGCCGACTA CGTCGCCTTC CTCCGCACCG TCACGCCCGA GACGCAGCTC 300 GGCCGGGGCC GCCAGCTCCG GCGCTTCAAC GTCGGCGAGG ACTGCCCGGT CTTCGACGGC 360 CTCTATGCCT ACTGCCAGTC CTACGCGGGC GCCTCCATCA GCGCCGCCGT CATGCTCAAC 420 CACGGCACCC ACGACATCGC CATCAACTGG TCGGGGGGCC TGCACCACGC CAAGAAGTCC 480 GAGGCCTCCG GCTTCTGCTA CGTCAACGAC ATCGTCCTCG CCATCCTCGA ACTCCTCAAG 540 GTCCACGAGC GAGTTCTGTA CATTGATATT GATATCCATC ATGGAGATGG AGTTGAAGAG 600 GCATTCTACA CAACTAATAG GGTTATGACA GTCTCGTTTC ACAAGTTTGG GGAATATTTC 660 CCGGGAACAG GGGACATCCG TGACATTGGG TACGCAGAAG GGAAGTATTA CTGCCTGAAT 720 GTGCCGCTAG ATGATGGAAT TGATGATGAT AGCTACCAGT CCATCTTCAA GCCAATCATC 780 GGCAAAGTTA TGGAGATGTA TCATCCTGAT GCAGTTGTGC TTCAATGTGG TGCTGATTCG 840 TTGTCCGGTG ATAGGTTGGG ATGTTTCAAT CTCTCAGGCA AAGGTCATGC GGAATGTGTT 900 AAGTACATGA GATCGTTCAA TGTTCCGTTG CTACTTCTTG GTGGTGGTGG ATATACCATA 960 AGAAATGTTT CACGGTGCTG GTGTTACGAG ACAGGAGTTG CAGTTGGTGA AGAGCTTAAG 1020 GAAAAATTGC CTTACAATGA GTACTATGAA TATTTTGGTC CAGAATACAG TCTTTACGTT 1080 TCATCAAGTA ACATGGAGAA CAGAAATACA AACAAGCAAT TGGAGGAAAT GAAATGTAAA 1140 ATTCTGGAGA ATCTTTCAAA AGTGGAGCAT GCTCCTAGTG TCCAATTTGA AGAGCGAATT 1200 CCTGAAAGAA AGCTACCTGA GCGAGATGAA GATAAAGAGG ATCCAGATAG AAGGCCCGAC 1260 CCTTACTTTG ATAGGTTTTT GAGTGCTCGC AGACGTCTGA AACACTCAGC AAGAAGTCGA 1320 AACACCGGAG ATACGAGAGA ATATACTGAA ACAGAGGCCA AAGATCAGCA TGGTAAGATA 1380 CCAACAACTG AACATAGAGG ACCAGAACCG ATGGAAGAGG ATCTTGGTTC CTCCAAACAA 1440 GCACCTCCTG CGGATGCAAA TGGGATGGCC ATCAACGCCC CAGGCAATGT CAAGAATGAA 1500 CCGGAAAGCT CACCCAAATG ACCTATGCAC CCCAAGGCAT GATTTGCTAC CTTCAGGCAA 1560 ACACCAGCTC CCCCGTCACG GTTTGCTTCA TATGCTCTTT ACTGGCAGAA ACTGTGTGAA 1620 TCCGTACTGC ATATCGTCAT TTCAAACTCA CTCACCCTGT GGTATTGTAA GATCGTTTCT 1680 TCTGTAGAAT AGTGTAGGAA TCTATTGGTG GCAACACTTG CAGCTAAAGA ATTCCATAGT 1740 GTTCAGGCAA TGCTAGACGT GGAGACATTA GACTGACCAA TTTGGCAATT CCACATGTAA 1800 CATGGACCAA AAGTTACAGT ATTATAGTCT GTTGGAACTC CAGGCCAAAG CACTATGCCT 1860 ACGTGTGTTT GCTCTCTGTT GGTTGTGTTT CGTTCACAGC TACTTCTTCC GACGCATGGA 1920 GTGGGGTGTG GAAACATAAT TAGTGGTGAT TTTTTAATGG AATTAATTGA GT
1973Nucleotide Fasta Sequence
>OB02G17760.1|Class-I|Oryza brachyantha ATGGATCCCTCGTCGGCGGGCTCCGGCGGCAACTCGCTGGCGGCGGTGGCGGGGACGGACGCCCAGAAGCGGCGGGTGTGCTACTTCTACGACACGGAGGTGGGCAACTACTACTACGGGCAGGGCCACCCGATGAAGCCCCACCGCGTGCGGATGACCCACGCGCTGCTCGCCCACTACGGCCTCCTCGGCCGGATGCAGGTGCTCCGCCCGCTCCGCGCCCTCGACCACGACTTCTGCCGCTTCCACTCCGCCGACTACGTCGCCTTCCTCCGCACCGTCACGCCCGAGACGCAGCTCGGCCGGGGCCGCCAGCTCCGGCGCTTCAACGTCGGCGAGGACTGCCCGGTCTTCGACGGCCTCTATGCCTACTGCCAGTCCTACGCGGGCGCCTCCATCAGCGCCGCCGTCATGCTCAACCACGGCACCCACGACATCGCCATCAACTGGTCGGGGGGCCTGCACCACGCCAAGAAGTCCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAACTCCTCAAGGTCCACGAGCGAGTTCTGTACATTGATATTGATATCCATCATGGAGATGGAGTTGAAGAGGCATTCTACACAACTAATAGGGTTATGACAGTCTCGTTTCACAAGTTTGGGGAATATTTCCCGGGAACAGGGGACATCCGTGACATTGGGTACGCAGAAGGGAAGTATTACTGCCTGAATGTGCCGCTAGATGATGGAATTGATGATGATAGCTACCAGTCCATCTTCAAGCCAATCATCGGCAAAGTTATGGAGATGTATCATCCTGATGCAGTTGTGCTTCAATGTGGTGCTGATTCGTTGTCCGGTGATAGGTTGGGATGTTTCAATCTCTCAGGCAAAGGTCATGCGGAATGTGTTAAGTACATGAGATCGTTCAATGTTCCGTTGCTACTTCTTGGTGGTGGTGGATATACCATAAGAAATGTTTCACGGTGCTGGTGTTACGAGACAGGAGTTGCAGTTGGTGAAGAGCTTAAGGAAAAATTGCCTTACAATGAGTACTATGAATATTTTGGTCCAGAATACAGTCTTTACGTTTCATCAAGTAACATGGAGAACAGAAATACAAACAAGCAATTGGAGGAAATGAAATGTAAAATTCTGGAGAATCTTTCAAAAGTGGAGCATGCTCCTAGTGTCCAATTTGAAGAGCGAATTCCTGAAAGAAAGCTACCTGAGCGAGATGAAGATAAAGAGGATCCAGATAGAAGGCCCGACCCTTACTTTGATAGGTTTTTGAGTGCTCGCAGACGTCTGAAACACTCAGCAAGAAGTCGAAACACCGGAGATACGAGAGAATATACTGAAACAGAGGCCAAAGATCAGCATGGTAAGATACCAACAACTGAACATAGAGGACCAGAACCGATGGAAGAGGATCTTGGTTCCTCCAAACAAGCACCTCCTGCGGATGCAAATGGGATGGCCATCAACGCCCCAGGCAATGTCAAGAATGAACCGGAAAGCTCACCCAAATGACCTATGCACCCCAAGGCATGATTTGCTACCTTCAGGCAAACACCAGCTCCCCCGTCACGGTTTGCTTCATATGCTCTTTACTGGCAGAAACTGTGTGAATCCGTACTGCATATCGTCATTTCAAACTCACTCACCCTGTGGTATTGTAAGATCGTTTCTTCTGTAGAATAGTGTAGGAATCTATTGGTGGCAACACTTGCAGCTAAAGAATTCCATAGTGTTCAGGCAATGCTAGACGTGGAGACATTAGACTGACCAATTTGGCAATTCCACATGTAACATGGACCAAAAGTTACAGTATTATAGTCTGTTGGAACTCCAGGCCAAAGCACTATGCCTACGTGTGTTTGCTCTCTGTTGGTTGTGTTTCGTTCACAGCTACTTCTTCCGACGCATGGAGTGGGGTGTGGAAACATAATTAGTGGTGATTTTTTAATGGAATTAATTGAGT
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |