WERAM Information

Tag Content
WERAM ID WERAM-Xet-0020
Ensembl Protein ID ENSXETP00000005840.3
Gene Name hdac3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSXETG00000002708.3 ENSXETT00000005840.3 ENSXETP00000005840.3
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.30e-169 563.8 4 388
Organism Xenopus tropicalis
Domain Profile
  HDAC Class-I
           class-1.txt   2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90 
                           +vay+yd+dvg++hyg++hpmkp+rlslth+Lvl+ygl+kk+ ++kp +as++++++fhse+yi+fl++v+p+n++ ++k+l+ fnvg+
  ENSXETP00000005840.3   4 TVAYFYDPDVGNFHYGTGHPMKPHRLSLTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGD 92 
                           79*************************************************************************************** PP
           class-1.txt  91 dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeaf 179
                           dcPvf glfe+c+ +tGasl++a++Ln+k +diainwaGGlhhakk easGfcyvnDiv++ilellk+h+rvly+did+hhGDgv+eaf
  ENSXETP00000005840.3  93 DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYVDIDIHHGDGVQEAF 181
                           ***************************************************************************************** PP
           class-1.txt 180 yttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefn 268
                           y tdrvmtvsfhkyg++ffPgtGd+++vgae+g+yy++nvPl+dgidD+sy+++f++vi++vi++++P+++vlqcGaDsl +Drlg+fn
  ENSXETP00000005840.3 182 YLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVIKQVIDFYQPTCIVLQCGADSLGCDRLGCFN 270
                           ***************************************************************************************** PP
           class-1.txt 269 lsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                           lsi+gh+ecv++vksfn+pllvlGGGGYt+rnvaRcwtyet++++
  ENSXETP00000005840.3 271 LSIRGHGECVQYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLV 315
                           ******************************************987 PP
           class-1.txt 228 esyekifksviskv.ieafePeavvlqcGaDslagD 262
                           +++ +i +++ +++ +  + P++ + ++ +D l+ +
  ENSXETP00000005840.3 353 QYLDQIRQTIFENLkMLNHAPSVQIHDVPSDILSYE 388
                           455666666666653445777777777777777665 PP
Protein Sequence
(Fasta)		MAKTVAYFYD PDVGNFHYGT GHPMKPHRLS LTHSLVLHYG LYKKMIVFKP YQASQHDMCR 60
FHSEDYIDFL QRVSPNNMQG FTKSLNAFNV GDDCPVFPGL FEFCSRYTGA SLQGATQLNN 120
KICDIAINWA GGLHHAKKFE ASGFCYVNDI VIGILELLKY HPRVLYVDID IHHGDGVQEA 180
FYLTDRVMTV SFHKYGNYFF PGTGDMYEVG AESGRYYCLN VPLRDGIDDQ SYRHLFQPVI 240
KQVIDFYQPT CIVLQCGADS LGCDRLGCFN LSIRGHGECV QYVKSFNIPL LVLGGGGYTV 300
RNVARCWTYE TSLLVDETIS EELPYSEYFE YFAPDFTLHP DVSTRIENQN SRQYLDQIRQ 360
TIFENLKMLN HAPSVQIHDV PSDILSYERT DEPDPEERGS EDNYSRQPLP EASNEFYDGD 420
HDNDKESDVE I 431
Nucleotide Sequence
(Fasta)		TGGGATTCCA AGCTTGGGAT ACACGCCCTC TGGGGGTAGA GCCCAATACG GGAAACTACT 60
GAATGGATTC AGATCCGCAT AGCAACTGGT GACGTATGGG GCCCTGCAGG GCTGCTGAGA 120
GAAAAAGGAG CAAACGTATT TCCTGTGCGC TGCCGGAAGC GCTGCTGCTG CTAGTTCTGT 180
AGGGAGTACT TGGGTGTTTT AGGTCTGCTT TTGACAGCGT TATGGCAAAG ACTGTGGCTT 240
ATTTTTACGA TCCGGACGTG GGGAACTTCC ATTATGGCAC AGGTCATCCC ATGAAACCTC 300
ACCGATTATC CCTTACACAC AGTCTGGTTC TACACTATGG ACTTTATAAG AAGATGATTG 360
TCTTCAAACC ATACCAGGCT TCCCAGCATG ACATGTGCCG ATTTCACTCT GAAGACTACA 420
TTGACTTCCT TCAGAGAGTG AGCCCCAATA ACATGCAAGG CTTCACTAAG AGCCTAAATG 480
CCTTCAATGT TGGGGATGAT TGCCCAGTTT TCCCTGGTCT CTTTGAATTT TGCTCTCGGT 540
ACACAGGAGC CTCTTTGCAG GGTGCAACAC AGCTAAATAA TAAGATCTGT GACATTGCAA 600
TTAACTGGGC TGGCGGACTG CACCATGCTA AAAAATTTGA GGCATCTGGG TTTTGTTATG 660
TGAATGACAT CGTTATTGGC ATTCTTGAGC TACTTAAGTA TCATCCTCGT GTTCTTTATG 720
TAGATATTGA TATTCATCAT GGAGATGGAG TACAGGAAGC ATTCTACCTC ACTGACAGAG 780
TTATGACAGT ATCATTTCAC AAGTATGGGA ATTATTTTTT CCCTGGTACA GGGGATATGT 840
ACGAAGTGGG AGCAGAAAGT GGAAGATATT ACTGTTTGAA TGTTCCCTTA AGAGATGGCA 900
TAGATGATCA AAGTTATAGG CACTTATTCC AGCCTGTTAT CAAACAGGTG ATAGATTTCT 960
ATCAGCCCAC CTGTATTGTT TTGCAGTGTG GAGCAGACTC CCTGGGTTGT GACAGACTGG 1020
GGTGTTTTAA CCTGAGCATA AGGGGCCATG GGGAATGCGT TCAGTATGTG AAAAGCTTCA 1080
ATATTCCTTT GCTTGTTCTT GGTGGAGGTG GTTACACTGT GCGTAATGTA GCTCGCTGCT 1140
GGACTTATGA AACGTCGCTG CTTGTTGATG AGACAATTAG TGAAGAGCTG CCTTATAGCG 1200
AATACTTTGA GTACTTTGCG CCAGATTTTA CGCTTCATCC GGATGTTAGT ACCAGAATTG 1260
AAAACCAAAA CTCCCGGCAG TATCTAGATC AAATCAGACA GACCATTTTT GAGAACCTAA 1320
AGATGTTGAA CCATGCACCC AGTGTTCAGA TCCACGATGT TCCATCGGAC ATTCTGAGCT 1380
ATGAGCGCAC AGATGAGCCA GATCCAGAAG AGAGGGGTTC AGAAGACAAC TACAGCAGGC 1440
AACCTTTGCC TGAAGCTTCA AATGAATTTT ATGATGGTGA CCATGATAAT GACAAGGAAA 1500
GTGATGTTGA GATTTAAAAA ACAACCCTGA AATGACATTT TTCTAAGTGT ACTCACGGCA 1560
GGCTGTGAGC CTATACTTTA CCATTTTATG AACTTCTCCC ATCAATGTGC CTGGATAAGG 1620
GTCAGCGGAT CCACTCCTAG GTTATTTCAG GACAATATAT CCAGTTTGCC TGTTTTTTGG 1680
GGACAGGACT GTATTAGAAC TCGTCTACTT TTTGCAGGAC TTTTTCCAAA ATGTTGGGAC 1740
TTCCCACATT TCAGAGAACA GCTCTCTTAA CAGAGGGACT TTTTGCACTA ACCGTGCAGC 1800
GAAGACTAGC TTTTTTTTGT ATAGTGTTAC TGTTTATTTG ATTTATTCAC AAAACAAGTT 1860
ATATTGTTTT GATGTTTTTT TTTATTGTTA TTGGAAATAC CCAAAATATT AACTAGATCA 1920
CATTGTTTAG GCACTTGCTC ACGTTACTGT TGTTGCTGCA GCAGTAAAGG CTTACATTTT 1980
TAGGAATAAT TCATGTGCAG TTAACCCTTT GTAAATGCCT GTAATATGTA TATTGCAGAT 2040
TTTCCATTTA TTTACAGTGG AGCTGAGAAT TCGCTCTGAT AGTTGTGGGG TAGCTAAACA 2100
AACTTAGACC ACTATTTCAC ATGGTGCACA TAAGATATGT GACTACCCTG TCTCTATACA 2160
AGTATAATAC AAGCTTTTGT TAAAAGTAAC TGTATGCTGG TACAGCTGGA ACAAACCTGT 2220
GCATTTACTA AGAATTTTCC CTAAGAACCT CCATCTAAGG GCCATATTTA TTATAGTATG 2280
TAAGCCAACA TCACTGGTGA TGTTGCCCAT GGAAATCAAT CAGCAGTTAG ATTTGAATGG 2340
CCACCTATAA ATATAAAGAC AAAAGCAAAG ATCTGATTGG TTGTTATGGG CAACATCACA 2400
GGTGTTGTTG GCTTATAATA AATATAACAC TATAATAAAT ATGCCCCTTA ATGTGTTGGA 2460
CATAAACAAC CCAGTTAAAC TCTCATCATC CAGCTAAACC TTTTAGGCCA AGAGCTTTCC 2520
CTCACAATGC ATTTCTTGTG GATCCAGTTT CCTATGTATA AATACACTTT ATTTTTTATT 2580
AAACATGAGG TTTGATGTGA ACAGATCGTT GCTGGGCTGC ATAATCAGAT TTTATGCACT 2640
TGAATTGAAG CTGCAGTGTT GTTTGCTTCA TTTCCTGATA TTTGAGGCTA AAACATGTAG 2700
AACAAAATAA CTATTTTTAA AGGGTGTACT TTACCTTTAA TACTCATCCT GAGTTTTATG 2760
GTAAGCACCA ACTGGTATCC TACCCAGCCA AGATTGATAA TCAGGGAATA CTCTGTATTG 2820
TGCACAACTG AATGTTTGGG ATAGTCTTGT GTTGTATATT TTTATGTTTT TTAAGTGCTC 2880
CTATATGAAA GTTGTAACAA ATGTGCTCAC ATCCACAGCC CTTCTGGCTG ATTTGCCTTT 2940
GTTTGAAAAA GAGGCTTTCT GATTGGTTGT GGAATCAAAC CTGAAATCCA ATCACCCCTA 3000
AGAATTCCAT ATACATTTAC ATATAATCTC TTTAATTTCT GCTCATTTGT TGTCAGTCCA 3060
TATATATTTT 3071
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Meg-0022 ENSMGAP00000001598.1 Meleagris gallopavo 96 0.0 872
WERAM-Gaga-0024 ENSGALP00000004141.3 Gallus gallus 96 0.0 872
WERAM-Anc-0124 ENSACAP00000011701.2 Anolis carolinensis 96 0.0 871
WERAM-Sah-0124 ENSSHAP00000012846.1 Sarcophilus harrisii 95 0.0 861
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 94 0.0 860
WERAM-Mum-0059 ENSMUSP00000037981.7 Mus musculus 95 0.0 859
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 95 0.0 859
WERAM-Sus-0109 ENSSSCP00000015310.2 Sus scrofa 95 0.0 859
WERAM-Poa-0142 ENSPPYP00000017772.1 Pongo abelii 95 0.0 859
WERAM-Paa-0044 ENSPANP00000001672.1 Papio anubis 95 0.0 859
WERAM-Pat-0142 ENSPTRP00000029652.3 Pan troglodytes 95 0.0 859
WERAM-Orc-0086 ENSOCUP00000007738.2 Oryctolagus cuniculus 95 0.0 859
WERAM-Ocp-0150 ENSOPRP00000015465.1 Ochotona princeps 95 0.0 859
WERAM-Myl-0096 ENSMLUP00000007910.2 Myotis lucifugus 95 0.0 859
WERAM-Ict-0140 ENSSTOP00000014542.2 Ictidomys tridecemlineatus 95 0.0 859
WERAM-Hos-0198 ENSP00000302967.3 Homo sapiens 95 0.0 859
WERAM-Gog-0182 ENSGGOP00000015976.2 Gorilla gorilla 95 0.0 859
WERAM-Cap-0155 ENSCPOP00000012861.2 Cavia porcellus 95 0.0 859
WERAM-Caf-0075 ENSCAFP00000030390.2 Canis familiaris 95 0.0 859
WERAM-Caj-0192 ENSCJAP00000033421.2 Callithrix jacchus 95 0.0 859
WERAM-Aim-0114 ENSAMEP00000011012.1 Ailuropoda melanoleuca 95 0.0 859
WERAM-Eqc-0167 ENSECAP00000018023.1 Equus caballus 95 0.0 858
WERAM-Tag-0179 ENSTGUP00000015405.1 Taeniopygia guttata 95 0.0 858
WERAM-Dan-0065 ENSDNOP00000006447.2 Dasypus novemcinctus 95 0.0 855
WERAM-Mup-0085 ENSMPUP00000008127.1 Mustela putorius furo 94 0.0 853
WERAM-Ova-0007 ENSOARP00000000868.1 Ovis aries 94 0.0 853
WERAM-Mod-0086 ENSMODP00000013319.2 Monodelphis domestica 94 0.0 850
WERAM-Fec-0077 ENSFCAP00000006409.3 Felis catus 94 0.0 849
WERAM-Otg-0013 ENSOGAP00000000543.2 Otolemur garnettii 94 0.0 848
WERAM-Orn-0192 ENSONIP00000019932.1 Oreochromis niloticus 92 0.0 845
WERAM-Leo-0119 ENSLOCP00000014828.1 Lepisosteus oculatus 93 0.0 843
WERAM-Orla-0093 ENSORLP00000011294.1 Oryzias latipes 92 0.0 842
WERAM-Pof-0043 ENSPFOP00000003698.2 Poecilia formosa 92 0.0 842
WERAM-Xim-0005 ENSXMAP00000000863.1 Xiphophorus maculatus 92 0.0 840
WERAM-Dar-0082 ENSDARP00000054625.5 Danio rerio 92 0.0 840
WERAM-Nol-0100 ENSNLEP00000011707.1 Nomascus leucogenys 93 0.0 840
WERAM-Ten-0120 ENSTNIP00000013021.1 Tetraodon nigroviridis 91 0.0 834
WERAM-Gaa-0203 ENSGACP00000024795.1 Gasterosteus aculeatus 91 0.0 833
WERAM-Gam-0015 ENSGMOP00000001496.1 Gadus morhua 92 0.0 833
WERAM-Fia-0044 ENSFALP00000003005.1 Ficedula albicollis 96 0.0 829
WERAM-Pes-0041 ENSPSIP00000006305.1 Pelodiscus sinensis 96 0.0 821
WERAM-Tut-0154 ENSTTRP00000013027.1 Tursiops truncatus 90 0.0 802
WERAM-Ran-0128 ENSRNOP00000071791.1 Rattus norvegicus 88 0.0 799
WERAM-Ptv-0171 ENSPVAP00000014750.1 Pteropus vampyrus 88 0.0 789
WERAM-Mim-0152 ENSMICP00000015894.1 Microcebus murinus 88 0.0 783
WERAM-Anp-0042 ENSAPLP00000004660.1 Anas platyrhynchos 96 0.0 776
WERAM-Pem-0092 ENSPMAP00000009670.1 Petromyzon marinus 86 0.0 761
WERAM-Chh-0070 ENSCHOP00000007333.1 Choloepus hoffmanni 94 0.0 756
WERAM-Prc-0116 ENSPCAP00000010084.1 Procavia capensis 85 0.0 746
WERAM-Mam-0105 ENSMMUP00000016525.1 Macaca mulatta 95 0.0 743
WERAM-Tar-0077 ENSTRUP00000015206.1 Takifugu rubripes 87 0.0 719
WERAM-Loa-0085 ENSLAFP00000006680.3 Loxodonta africana 96 0.0 711
WERAM-Tas-0075 ENSTSYP00000007464.1 Tarsius syrichta 83 0.0 685
WERAM-Cii-0013 ENSCINP00000004801.3 Ciona intestinalis 73 0.0 684
WERAM-Tub-0054 ENSTBEP00000006507.1 Tupaia belangeri 94 0.0 665
WERAM-Cis-0077 ENSCSAVP00000016740.1 Ciona savignyi 73 0.0 663
WERAM-Drm-0025 FBpp0078414 Drosophila melanogaster 66 3e-177 618
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 62 4e-156 548
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 63 6e-156 547
WERAM-Coi-0024 EAS33504 Coccidioides immitis 63 2e-155 546
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 63 3e-155 545
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 62 3e-155 545
WERAM-Kop-0004 CAY67954 Komagataella pastoris 59 6e-154 541
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 61 8e-154 540
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 62 1e-153 540
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 63 2e-153 539
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 61 5e-153 538
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 64 2e-152 536
WERAM-Caa-0018 KGT69072 Candida albicans 57 5e-152 535
WERAM-Ved-0020 EGY15146 Verticillium dahliae 62 2e-151 532
WERAM-Glm-0130 GLYMA11G19290.1 Glycine max 58 2e-151 532
WERAM-Asg-0034 AAS54885 Ashbya gossypii 59 3e-151 531
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 61 7e-151 531
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 63 1e-150 530
WERAM-Art-0082 AT3G44680.1 Arabidopsis thaliana 58 2e-150 529
WERAM-Dio-0123 ENSDORP00000011840.1 Dipodomys ordii 80 3e-150 529
WERAM-Cag-0003 CAG57932 Candida glabrata 59 3e-150 528
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 58 3e-150 528
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 60 7e-150 527
WERAM-Bro-0059 Bo3g120880.1 Brassica oleracea 58 8e-150 527
WERAM-Trv-0003 EHK19072 Trichoderma virens 61 1e-149 526
WERAM-Met-0097 AES88434 Medicago truncatula 57 2e-149 526
WERAM-Brr-0098 Bra019424.1-P Brassica rapa 58 2e-149 526
WERAM-Thc-0114 EOY33523 Theobroma cacao 57 5e-149 525
WERAM-Org-0044 ORGLA04G0087200.1 Oryza glaberrima 57 7e-149 524
WERAM-Pot-0020 POPTR_0001s46430.1 Populus trichocarpa 57 9e-149 524
WERAM-Orni-0039 ONIVA04G09660.1 Oryza nivara 57 1e-148 523
WERAM-Ori-0051 BGIOSGA016344-PA Oryza indica 57 1e-148 523
WERAM-Orgl-0043 OGLUM04G11380.3 Oryza glumaepatula 57 1e-148 523
WERAM-Orbr-0052 OB04G18820.1 Oryza brachyantha 57 3e-148 522
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 59 4e-148 521
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 59 4e-148 521
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 57 4e-148 521
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 57 7e-148 521
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 61 9e-148 520
WERAM-Amt-0048 ERN13133 Amborella trichopoda 57 1e-147 520
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 59 2e-147 520
WERAM-Trr-0017 EGR48353 Trichoderma reesei 60 2e-147 519
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 59 2e-147 519
WERAM-Mua-0089 GSMUA_Achr6P17260_001 Musa acuminata 56 3e-147 519
WERAM-Orb-0042 OBART04G11700.1 Oryza barthii 57 5e-147 518
WERAM-Orr-0042 ORUFI04G12890.1 Oryza rufipogon 57 6e-147 518
WERAM-Sob-0086 Sb06g015420.1 Sorghum bicolor 59 1e-146 516
WERAM-Chr-0011 EDP01149 Chlamydomonas reinhardtii 56 2e-146 516
WERAM-Arl-0024 fgenesh1_pg.C_scaffold_5000937 Arabidopsis lyrata 56 3e-146 515
WERAM-Viv-0012 VIT_03s0038g04240.t01 Vitis vinifera 58 4e-146 514
WERAM-Orp-0042 OPUNC04G09700.1 Oryza punctata 57 7e-146 514
WERAM-Prp-0063 EMJ06433 Prunus persica 57 3e-145 512
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 54 7e-145 511
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 60 7e-145 511
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 60 8e-145 511
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 58 8e-145 511
WERAM-Sei-0035 Si010167m Setaria italica 59 1e-144 510
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 60 1e-144 510
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 60 3e-144 509
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 55 3e-144 509
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 63 4e-144 508
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 60 8e-144 507
WERAM-Zem-0071 GRMZM2G119703_P01 Zea mays 58 3e-143 505
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 60 5e-143 504
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 58 6e-143 504
WERAM-Pytr-0033 EDU43668 Pyrenophora triticirepentis 58 1e-142 503
Created Date 25-Jun-2016