WERAM Information


Tag Content
WERAM ID WERAM-Tar-0132
Ensembl Protein ID ENSTRUP00000028721.1
Gene Name hdac7b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSTRUG00000011380.1 ENSTRUT00000028837.1 ENSTRUP00000028721.1
ENSTRUG00000011380.1 ENSTRUT00000028838.1 ENSTRUP00000028722.1
ENSTRUG00000011380.1 ENSTRUT00000028839.1 ENSTRUP00000028723.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.10e-142 476.2 491 832
HDAC Class-I 2.50e-30 107.4 509 801
Organism Takifugu rubripes
Domain Profile
  HDAC Class-II

           class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 
+glvyd++m khq++++++++hpE+++R+q+i+srl+e+gl++++e++++rkat+eelq+vHse+hv ++t+ +l++ +l++
ENSTRUP00000028721.1 491 TGLVYDSQMQKHQCTCGDNSRHPEHAGRVQSIWSRLHERGLRGQCERIRSRKATLEELQSVHSEKHVLVFGTN-PLNRLKLDNrklagi 578
79***********************************************************************.*************** PP
class-2.txt 85 .............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqkl 160
++vd d++++e+++++a+r+a+G+v++l+ kv++gelkngfavvRPPGHHa++s++ GFC+fn+va+aak+lqq+l
ENSTRUP00000028721.1 579 lsqrtfvmlpcggVGVDIDTVWNEHHTSTASRIAAGCVTDLALKVAQGELKNGFAVVRPPGHHATHSSPLGFCFFNSVAIAAKQLQQRL 667
***************************************************************************************** PP
class-2.txt 161 kvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvl 246
+v+kilivDwD+HhGnGtqe+fy+dp+vly+SlHRyd g+ffp g g+++evg+g+gegfnvN+ w+ggl +gdaeylaafr+ v+
ENSTRUP00000028721.1 668 NVSKILIVDWDIHHGNGTQEAFYSDPSVLYISLHRYDGGNFFP--GGGHPSEVGKGAGEGFNVNIGWTGGLnppIGDAEYLAAFRTAVM 754
*******************************************..******************************************** PP
class-2.txt 247 piakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
pia++F+Pd+vlvsaGfDa++g ++lgg++vtakc++ lt+ql++laggrvvl+lEGG++lkai++a+ea+v+aLlg
ENSTRUP00000028721.1 755 PIAHQFSPDVVLVSAGFDAVAGhsSSLGGYKVTAKCFGFLTRQLMSLAGGRVVLALEGGHDLKAICDASEACVSALLG 832
**********************9999**************************************************96 PP

  HDAC Class-I

           class-1.txt  17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyi.....eflkkvepenae........els.kelkkfnvged 91 
+++hp r++ + + + + gl + e+++++ka+ eel+++hse+++ + l++ + +n + ++ +v+ d
ENSTRUP00000028721.1 509 NSRHPEHAGRVQSIWSRLHERGLRGQCERIRSRKATLEELQSVHSEKHVlvfgtNPLNRLKLDNRKlagilsqrTFVmLPCGGVGVDID 597
4568888889999999999999999*******************999873333344788888888866554322111112223334444 PP
class-1.txt 92 cPvfdglfey.cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgv 175
+ ++ + +++ +G + a k+ ++e + a+ G hha +s+ Gfc+ n + +a +l++ + +++l +d d+hhG+g
ENSTRUP00000028721.1 598 TVWNEHHTSTaSRIAAGCVTDLALKVAQGELKngFAVVRPPG-HHATHSSPLGFCFFNSVAIAAKQLQQrlNVSKILIVDWDIHHGNGT 685
444444444414455666777888999887662245555554.9***********************9855678*************** PP
class-1.txt 176 eeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdg....idDesyekifksviskvieafePeavvlqcGaDsl 259
+eafy v+ +s+h+y+ +ffPg G+ s+vg++ g + vn+ + g i D +y + f++ + ++ + f+P++v++ G D++
ENSTRUP00000028721.1 686 QEAFYSDPSVLYISLHRYDGgNFFPGGGHPSEVGKGAGEGFNVNIGWTGGlnppIGDAEYLAAFRTAVMPIAHQFSPDVVLVSAGFDAV 774
******************7527***********************86555222278********************************* PP
class-1.txt 260 agD..rlgefnlsikghaecvkfvksf 284
ag lg ++++ k ++ + + s
ENSTRUP00000028721.1 775 AGHssSLGGYKVTAKCFGFLTRQLMSL 801
985226999999999888766666555 PP

Protein Sequence
(Fasta)
PMDLRVTQRF LQPGPDSAML APHPPFFLGP LTSQNCSQLT QQQLQVGKEK REVGPKREKL 60
QQLIRKNKDE QSAVASPLVR QKLREHIIMK SQPTQDRVTP NHCSSTLAYS LIQSLTMIWS 120
PRLPTPDVSP KPQAPPCDQR KELALRRTVS EPTLKWKIKK MISARPNPLQ RKISAPPTVR 180
HRTETLGNSS SNSSSTSASG CSSPNDTHPD SSSLAHEAQR LLLKDGNLAH FTLSPSSTTM 240
PNITAGLPAQ YQADVQVSRP LAGSSLRHVY MPLEGSNPLA QHLQPVLILE PHSGLLHPQF 300
VSFYGLSGVP LQQKQPYQSK REGVITSHRP LERTRSEPPP YSHPPLSLNT GHPSYVQHLP 360
QQFHKSVQIP SEDMGLDEIS SGTASVSSSE LGSVCEESYQ SRQRTTSVDS VYDTESTTSS 420
RESLTEPPQS VKGSIFNLKT SCAFCMPALI WPHQPLIRTQ SSPASTSLPP SHPATAVPSL 480
TLSNPQLRFT TGLVYDSQMQ KHQCTCGDNS RHPEHAGRVQ SIWSRLHERG LRGQCERIRS 540
RKATLEELQS VHSEKHVLVF GTNPLNRLKL DNRKLAGILS QRTFVMLPCG GVGVDIDTVW 600
NEHHTSTASR IAAGCVTDLA LKVAQGELKN GFAVVRPPGH HATHSSPLGF CFFNSVAIAA 660
KQLQQRLNVS KILIVDWDIH HGNGTQEAFY SDPSVLYISL HRYDGGNFFP GGGHPSEVGK 720
GAGEGFNVNI GWTGGLNPPI GDAEYLAAFR TAVMPIAHQF SPDVVLVSAG FDAVAGHSSS 780
LGGYKVTAKC FGFLTRQLMS LAGGRVVLAL EGGHDLKAIC DASEACVSAL LGMEVEPLSS 840
STLEQKPCEN AVKSLQSVIQ VHGEYWQSVE DSADTVDLSY QQAQRRRLRR DSDSEAVSAI 900
ASLSVRAAAS DR 912
Nucleotide Sequence
(Fasta)
CCGATGGACT TAAGAGTGAC CCAGAGGTTC CTACAGCCAG GCCCAGACTC TGCCATGCTG 60
GCCCCCCACC CTCCCTTCTT CCTGGGTCCC CTCACTTCTC AGAATTGCTC CCAGTTGACC 120
CAGCAGCAAC TGCAGGTGGG TAAAGAAAAG CGCGAGGTGG GACCTAAAAG AGAAAAGCTG 180
CAGCAGCTGA TACGAAAGAA TAAAGATGAG CAGAGCGCTG TGGCCAGCCC TCTGGTCAGG 240
CAGAAACTTC GGGAACACAT AATAATGAAG AGCCAGCCAA CTCAGGACAG GGTCACCCCC 300
AACCACTGCA GCTCCACGCT GGCCTACAGT TTAATCCAGA GTTTGACTAT GATTTGGTCA 360
CCTAGGCTTC CGACTCCGGA CGTGTCCCCC AAACCTCAGG CTCCCCCCTG CGACCAGCGC 420
AAAGAGCTGG CCCTTCGGCG CACAGTCTCT GAGCCCACTC TGAAGTGGAA GATAAAGAAG 480
ATGATCAGTG CCCGACCGAA CCCTCTGCAG CGGAAGATCA GCGCCCCTCC TACAGTCAGA 540
CACAGGACCG AGACTCTGGG TAACTCGTCC TCCAACAGCA GCAGCACCTC AGCGTCAGGG 600
TGCAGCTCCC CCAACGACAC CCACCCAGAC AGCAGCTCGC TGGCTCATGA GGCGCAGCGA 660
CTGCTGTTGA AGGACGGTAA TTTGGCTCAC TTCACCCTGT CTCCCAGTTC CACCACCATG 720
CCCAACATCA CTGCCGGACT CCCTGCACAG TACCAGGCCG ATGTGCAAGT ATCCAGACCT 780
TTGGCTGGTT CTTCTCTCCG TCATGTTTAC ATGCCTCTGG AAGGAAGCAA CCCTCTGGCC 840
CAGCACCTAC AGCCTGTGCT TATACTGGAA CCACATTCCG GACTGCTCCA TCCCCAGTTT 900
GTCTCCTTTT ATGGTTTGAG TGGAGTCCCT CTGCAGCAGA AGCAGCCTTA CCAGTCCAAA 960
AGGGAAGGAG TAATCACCTC GCACAGACCC CTGGAGCGAA CGCGCTCTGA GCCTCCACCC 1020
TACAGCCACC CACCTCTCAG TCTGAACACC GGTCATCCCT CATATGTCCA GCACCTGCCC 1080
CAGCAGTTCC ACAAGAGTGT ACAGATTCCG TCGGAAGATA TGGGCCTGGA TGAGATCAGT 1140
TCAGGAACAG CGTCCGTGTC GAGCTCAGAA CTGGGTTCAG TGTGTGAGGA AAGCTACCAG 1200
AGTAGACAGA GGACCACCAG CGTGGACTCG GTGTATGACA CCGAGTCCAC GACCTCCTCA 1260
CGGGAGAGCT TAACAGAACC TCCACAGTCT GTCAAAGGCA GCATTTTTAA TTTAAAAACA 1320
TCATGTGCCT TTTGCATGCC TGCTCTGATT TGGCCCCACC AGCCTCTTAT CCGGACCCAG 1380
TCCTCCCCAG CCTCCACCTC CCTGCCTCCT TCACATCCAG CCACCGCAGT GCCGTCCTTG 1440
ACCCTGTCCA ACCCGCAGCT GCGCTTCACA ACAGGCCTGG TGTACGACTC TCAAATGCAG 1500
AAGCACCAGT GTACCTGCGG GGACAACAGT CGCCACCCTG AGCATGCTGG GAGGGTCCAG 1560
AGCATCTGGT CCAGGCTGCA CGAGCGGGGC CTCCGAGGCC AGTGTGAGCG CATCCGCAGC 1620
AGGAAGGCGA CCCTGGAGGA GCTGCAGTCG GTCCATTCGG AGAAGCACGT GCTGGTGTTC 1680
GGAACCAACC CGCTGAACCG CCTCAAGCTG GACAACCGCA AGCTGGCAGG AATTTTATCC 1740
CAGCGGACTT TTGTGATGTT GCCCTGCGGA GGAGTTGGGG TGGATATCGA TACAGTCTGG 1800
AACGAGCATC ACACATCCAC AGCTTCCCGC ATCGCTGCGG GTTGCGTCAC AGACCTGGCG 1860
CTGAAGGTGG CTCAGGGAGA GCTGAAGAAC GGCTTTGCAG TGGTGAGACC CCCTGGACAC 1920
CATGCAACCC ACTCCTCCCC CCTGGGCTTC TGTTTCTTCA ACTCGGTGGC CATCGCCGCC 1980
AAGCAGCTCC AGCAAAGGCT CAACGTCAGC AAGATCCTCA TCGTGGACTG GGACATTCAC 2040
CATGGCAACG GCACTCAGGA GGCCTTCTAC AGCGACCCCA GTGTTTTGTA CATCTCTCTC 2100
CATCGATACG ACGGTGGTAA CTTCTTTCCC GGCGGCGGCC ACCCCAGCGA GGTGGGCAAA 2160
GGCGCCGGCG AGGGCTTCAA TGTCAACATA GGATGGACGG GGGGGCTGAA CCCTCCCATC 2220
GGTGACGCCG AGTACCTGGC TGCCTTCAGG ACGGCGGTGA TGCCCATCGC TCACCAGTTC 2280
TCCCCCGACG TGGTGCTGGT GTCTGCGGGC TTCGATGCCG TCGCTGGACA TTCGTCATCG 2340
CTGGGGGGCT ACAAGGTCAC AGCCAAGTGT TTCGGCTTTC TGACCCGACA GCTGATGTCG 2400
CTGGCCGGAG GGCGGGTGGT TCTGGCCCTG GAGGGCGGGC ACGATCTTAA GGCCATCTGC 2460
GATGCCTCTG AAGCCTGTGT GAGCGCCTTG CTGGGAATGG AGGTGGAGCC TCTGTCTTCG 2520
TCCACTCTGG AGCAGAAACC CTGTGAGAAC GCTGTCAAGT CTCTGCAGAG CGTCATCCAG 2580
GTTCACGGTG AGTACTGGCA GAGCGTAGAG GACTCGGCCG ACACCGTGGA TCTGTCCTAC 2640
CAGCAGGCGC AGAGGCGGCG CCTGAGGCGA GACTCGGACT CAGAGGCCGT CAGCGCCATC 2700
GCCTCGCTGT CCGTGAGAGC CGCCGCCTCG GACAGGTGA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Gaa-0079 ENSGACP00000010554.1 Gasterosteus aculeatus 69 0.0 1174
WERAM-Orn-0227 ENSONIP00000024390.1 Oreochromis niloticus 69 0.0 1159
WERAM-Pof-0015 ENSPFOP00000001511.2 Poecilia formosa 65 0.0 1082
WERAM-Xim-0225 ENSXMAP00000018758.1 Xiphophorus maculatus 64 0.0 1081
WERAM-Orla-0178 ENSORLP00000020522.1 Oryzias latipes 60 0.0 1003
WERAM-Ten-0061 ENSTNIP00000000291.1 Tetraodon nigroviridis 56 0.0 795
WERAM-Bot-0201 ENSBTAP00000038136.4 Bos taurus 50 0.0 771
WERAM-Mup-0003 ENSMPUP00000000413.1 Mustela putorius furo 52 0.0 766
WERAM-Caf-0101 ENSCAFP00000013479.3 Canis familiaris 52 0.0 763
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 50 0.0 759
WERAM-Eqc-0166 ENSECAP00000018277.1 Equus caballus 50 0.0 758
WERAM-Paa-0072 ENSPANP00000008610.1 Papio anubis 51 0.0 756
WERAM-Meg-0108 ENSMGAP00000010913.2 Meleagris gallopavo 49 0.0 756
WERAM-Fec-0138 ENSFCAP00000012982.3 Felis catus 52 0.0 756
WERAM-Gaga-0067 ENSGALP00000010190.4 Gallus gallus 49 0.0 753
WERAM-Hos-0021 ENSP00000080059.7 Homo sapiens 50 0.0 751
WERAM-Anc-0160 ENSACAP00000015012.3 Anolis carolinensis 49 0.0 751
WERAM-Gog-0184 ENSGGOP00000016066.2 Gorilla gorilla 51 0.0 751
WERAM-Pat-0040 ENSPTRP00000008320.5 Pan troglodytes 50 0.0 749
WERAM-Tut-0143 ENSTTRP00000011934.1 Tursiops truncatus 50 0.0 749
WERAM-Anp-0061 ENSAPLP00000006782.1 Anas platyrhynchos 49 0.0 746
WERAM-Leo-0044 ENSLOCP00000006280.1 Lepisosteus oculatus 52 0.0 746
WERAM-Pes-0124 ENSPSIP00000014863.1 Pelodiscus sinensis 49 0.0 745
WERAM-Ran-0240 ENSRNOP00000073744.1 Rattus norvegicus 49 0.0 743
WERAM-Ict-0024 ENSSTOP00000001667.2 Ictidomys tridecemlineatus 49 0.0 739
WERAM-Nol-0194 ENSNLEP00000021748.1 Nomascus leucogenys 49 0.0 738
WERAM-Cap-0074 ENSCPOP00000005427.2 Cavia porcellus 49 0.0 734
WERAM-Caj-0152 ENSCJAP00000019002.2 Callithrix jacchus 51 0.0 732
WERAM-Dan-0112 ENSDNOP00000014271.3 Dasypus novemcinctus 51 0.0 729
WERAM-Chs-0077 ENSCSAP00000002870.1 Chlorocebus sabaeus 49 0.0 728
WERAM-Lac-0191 ENSLACP00000021749.1 Latimeria chalumnae 51 0.0 728
WERAM-Xet-0073 ENSXETP00000023344.3 Xenopus tropicalis 51 0.0 728
WERAM-Ptv-0096 ENSPVAP00000008849.1 Pteropus vampyrus 49 0.0 725
WERAM-Mum-0046 ENSMUSP00000085744.5 Mus musculus 49 0.0 724
WERAM-Prc-0083 ENSPCAP00000007167.1 Procavia capensis 49 0.0 723
WERAM-Loa-0049 ENSLAFP00000003605.3 Loxodonta africana 50 0.0 715
WERAM-Ova-0207 ENSOARP00000020819.1 Ovis aries 48 0.0 705
WERAM-Otg-0067 ENSOGAP00000004897.2 Otolemur garnettii 51 0.0 704
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 45 0.0 684
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 45 0.0 684
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 45 0.0 672
WERAM-Dar-0240 ENSDARP00000132042.1 Danio rerio 77 0.0 670
WERAM-Mim-0087 ENSMICP00000008193.1 Microcebus murinus 48 0.0 663
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 65 0.0 647
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 66 0.0 644
WERAM-Ocp-0101 ENSOPRP00000009320.1 Ochotona princeps 48 0.0 639
WERAM-Poa-0042 ENSPPYP00000005074.1 Pongo abelii 49 2e-180 630
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 66 4e-180 629
WERAM-Mam-0226 ENSMMUP00000028518.2 Macaca mulatta 72 4e-180 629
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 65 5e-177 619
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 65 4e-176 615
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 65 1e-175 614
WERAM-Tag-0054 ENSTGUP00000003859.1 Taeniopygia guttata 66 2e-175 613
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 66 2e-175 613
WERAM-Ere-0008 ENSEEUP00000000313.1 Erinaceus europaeus 48 1e-173 608
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 64 2e-170 597
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 59 2e-161 567
WERAM-Ect-0068 ENSETEP00000007698.1 Echinops telfairi 44 7e-160 562
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 58 8e-154 542
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 42 3e-153 540
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 66 6e-147 519
WERAM-Ora-0021 ENSOANP00000002915.1 Ornithorhynchus anatinus 73 5e-140 496
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 51 1e-125 448
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 66 4e-119 426
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 48 2e-117 421
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 59 3e-114 410
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 53 2e-88 325
WERAM-Bro-0168 Bo9g014470.1 Brassica oleracea 40 1e-78 292
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 41 1e-78 291
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 41 3e-78 291
WERAM-Php-0085 PP1S34_252V6.1 Physcomitrella patens 43 5e-77 286
Created Date 25-Jun-2016