WERAM Information

Tag Content
WERAM ID WERAM-Ict-0140
Ensembl Protein ID ENSSTOP00000014542.2
Gene Name HDAC3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSTOG00000016240.2 ENSSTOT00000016244.2 ENSSTOP00000014542.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 4.70e-170 565.1 4 390
Organism Ictidomys tridecemlineatus
Domain Profile
  HDAC Class-I
           class-1.txt   2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90 
                           +vay+yd+dvg++hyg++hpmkp+rl+lth+Lvl+ygl+kk+ ++kp +as++++++fhse+yi+fl++v+p+n++ ++k+l+ fnvg+
  ENSSTOP00000014542.2   4 TVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGD 92 
                           79*************************************************************************************** PP
           class-1.txt  91 dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeaf 179
                           dcPvf glfe+c+ +tGasl++a++Ln+k +diainwaGGlhhakk easGfcyvnDiv++ilellk+h+rvlyidid+hhGDgv+eaf
  ENSSTOP00000014542.2  93 DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAF 181
                           ***************************************************************************************** PP
           class-1.txt 180 yttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefn 268
                           y tdrvmtvsfhkyg++ffPgtGd+++vgae+g+yy++nvPl+dgidD+sy+++f++vi++v+++++P+++vlqcGaDsl +Drlg+fn
  ENSSTOP00000014542.2 182 YLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFN 270
                           ***************************************************************************************** PP
           class-1.txt 269 lsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                           lsi+gh+ecv++vksfn+pllvlGGGGYt+rnvaRcwtyet++++
  ENSSTOP00000014542.2 271 LSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLV 315
                           ******************************************986 PP
           class-1.txt 228 esyekifksviskv.ieafePeavvlqcGaDslagDrl 264
                           +++ +i +++ +++ +  + P++ + ++ aD l+ Dr 
  ENSSTOP00000014542.2 353 QYLDQIRQTIFENLkMLNHAPSVQIHDVPADLLTYDRT 390
                           67788999999887456799**************9996 PP
Protein Sequence
(Fasta)		MAKTVAYFYD PDVGNFHYGA GHPMKPHRLA LTHSLVLHYG LYKKMIVFKP YQASQHDMCR 60
FHSEDYIDFL QRVSPTNMQG FTKSLNAFNV GDDCPVFPGL FEFCSRYTGA SLQGATQLNN 120
KICDIAINWA GGLHHAKKFE ASGFCYVNDI VIGILELLKY HPRVLYIDID IHHGDGVQEA 180
FYLTDRVMTV SFHKYGNYFF PGTGDMYEVG AESGRYYCLN VPLRDGIDDQ SYKHLFQPVI 240
NQVVDFYQPT CIVLQCGADS LGCDRLGCFN LSIRGHGECV EYVKSFNIPL LVLGGGGYTV 300
RNVARCWTYE TSLLVEEAIS EELPYSEYFE YFAPDFTLHP DVSTRIENQN SRQYLDQIRQ 360
TIFENLKMLN HAPSVQIHDV PADLLTYDRT DEADAEERGP EENYSRPEAP NEFYDGDHDN 420
DKESDVEI 428
Nucleotide Sequence
(Fasta)		GCCTGGTCCC GCCGGCGCTA TGGCCAAGAC TGTGGCCTAT TTCTACGACC CTGACGTGGG 60
CAACTTCCAC TACGGAGCTG GGCACCCTAT GAAGCCCCAT CGCCTGGCAT TGACTCATAG 120
CCTGGTCCTG CACTATGGTC TCTATAAGAA GATGATCGTC TTCAAGCCAT ACCAGGCCTC 180
CCAGCATGAC ATGTGCCGCT TCCACTCTGA GGACTACATT GATTTTCTGC AGAGAGTCAG 240
TCCCACCAAC ATGCAGGGCT TCACCAAGAG CCTTAATGCC TTCAATGTGG GCGATGACTG 300
CCCAGTGTTT CCCGGGCTCT TTGAGTTCTG CTCCCGTTAC ACAGGTGCAT CCCTCCAAGG 360
AGCAACCCAG CTGAACAACA AGATCTGCGA TATTGCCATT AACTGGGCTG GTGGTCTGCA 420
CCATGCCAAG AAGTTTGAGG CCTCTGGCTT TTGCTATGTC AACGACATTG TAATCGGCAT 480
CCTGGAGCTG CTCAAGTACC ACCCCCGCGT GCTCTATATT GATATTGACA TCCACCATGG 540
AGATGGCGTT CAGGAAGCCT TCTACCTCAC TGACAGGGTC ATGACGGTGT CTTTCCACAA 600
ATACGGAAAT TACTTCTTCC CTGGTACAGG TGACATGTAT GAAGTTGGAG CAGAGAGTGG 660
CCGCTACTAT TGTCTCAATG TGCCCTTGCG GGATGGCATT GATGATCAGA GTTACAAGCA 720
CCTTTTCCAG CCGGTCATCA ACCAGGTGGT GGACTTCTAC CAGCCCACCT GCATTGTACT 780
CCAGTGTGGA GCTGACTCTC TGGGCTGTGA TCGATTGGGC TGCTTCAACC TCAGTATCCG 840
AGGGCATGGG GAATGTGTTG AATATGTCAA GAGCTTTAAT ATCCCGCTAC TGGTGTTGGG 900
TGGTGGAGGC TATACTGTCC GAAATGTTGC CCGCTGCTGG ACATATGAGA CATCACTGCT 960
GGTAGAAGAG GCCATTAGTG AGGAGCTTCC CTATAGTGAA TACTTCGAGT ACTTTGCCCC 1020
TGACTTCACA CTCCATCCAG ACGTCAGCAC CCGCATTGAG AATCAGAACT CACGCCAGTA 1080
TCTGGACCAG ATCCGCCAGA CAATCTTTGA AAACCTGAAG ATGCTGAACC ATGCACCTAG 1140
TGTCCAGATT CATGATGTGC CTGCTGATCT CCTGACATAT GACAGGACTG ACGAGGCTGA 1200
CGCAGAGGAG AGGGGTCCTG AGGAGAACTA CAGCAGGCCA GAGGCACCCA ATGAATTCTA 1260
TGATGGAGAC CACGATAATG ACAAGGAAAG CGACGTGGAA ATTTAAGAGC GTCTTGGAAT 1320
GCTATGTCTC AAGGAATTCT TTTTCATGCC TTGTTGGTGG GAAGGGAAAA GGTGTGCATC 1380
CCTAGTCTGG GAACCTGAGG CTAACTCTGA GGAAGGGTTT GGAGATCACA TGTGGTTCTA 1440
GAACCATCTA TCCCCTTTTC CTTTCTCTCC CACAGCCTGA CAATGGTACT TATTAGGGAT 1500
GAGATGGGGA AGTATAGCTG GCTTTGGGAC ATTCTGGGCA GTAGACCCTA ATAGCCAGTC 1560
CCCAACCCTT CTGGTCCCTT ATTCCTTCCC TGCTTCCCTC CAACCCAGAG ACTCAGGGAT 1620
GAAGGGGTAG AGAGGACTGA GGTTGTCTCT AACATCCTTC TCCTTTGGGT TCTACTGCAG 1680
GCCTTACTTC CAGGACAAGC AAAGGGTGAG GGTTTTGGGT GGTAGGGGCT CTGGCTCCAT 1740
AACATCTTAA CTATAGACAA TGGGAAGTAT GGTTTTGTGT AGGGGAGGAT ATGAACATGT 1800
CTTGTCTAAC TTTTGGTTTT ATGTCCATTT TACCACTGTT TTTAATCCAA TAAACCAAGT 1860
TGGTATTTTT TGTACCTTTC TGGGAATATT AATTCTTGCT AATTATGTAT GAAGGGAAAG 1920
GGAAATGGGG TGATGATGCA TATAATAAAA ATCATAGTTA ACATTTATTC AGTACCCTAT 1980
GTTAGGTCCT GTGTATATAT TCTACATGGA TTATTTTACT TGTACATAGG GAGTTAATAG 2040
AACATTTTGG TGGAGAGTTA GACAAACTTG GGCAGATAAC TAGCTTGAGA TGGCAAAGAA 2100
GGTGACTTCA GGTTTGTTAA CGTAGGTGAT TGGCCTGCTC ATGCTTGTTG ATGAAGATAA 2160
ACTGAGATGA AACATGGTAA GTCTTAACAC AGTGCTAAAT ATTAAAAAGT TGCTCATTAA 2220
CTGTCTTTGT GAAAAACATT ACTAGATACT GTAAATGCTG CCAACATAGA CCCTTCTCTG 2280
GAGGAGTTTA CAGTCAGTAA GAAATGTGGT AAATTTAGCA CACATTGACA GTGGTACAAG 2340
AAAGAGAAGT GGTAGATGGG TCACTCCCTC AGTCCTTTCA GTCTGTTGCC CACCATGTTC 2400
GCTTAGAAAG TAGTTTTTAA ACTGTTTTGG ACAAACTGAG TTTGAAGTAT GGTCTGGACA 2460
GCTCTGTGCA ACTTTCTACC AGGCAATTAG GTCTAGAGCA CAAGGGAGAT GAAGGCTAGA 2520
TTGAGGAGCA ACCTGCTTAG CAGAGTCTGG TATTACCAGG CCATACTCTA AGCATTGGGG 2580
ACCCTAGTAA GTCACTGCCC TCCATGTCTG CTGTGGTCAA GAATATTCAC TCCATACTTT 2640
GAGGGCCC 2649
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sus-0109 ENSSSCP00000015310.2 Sus scrofa 100 0.0 894
WERAM-Poa-0142 ENSPPYP00000017772.1 Pongo abelii 100 0.0 894
WERAM-Paa-0044 ENSPANP00000001672.1 Papio anubis 100 0.0 894
WERAM-Pat-0142 ENSPTRP00000029652.3 Pan troglodytes 100 0.0 894
WERAM-Orc-0086 ENSOCUP00000007738.2 Oryctolagus cuniculus 100 0.0 894
WERAM-Ocp-0150 ENSOPRP00000015465.1 Ochotona princeps 100 0.0 894
WERAM-Myl-0096 ENSMLUP00000007910.2 Myotis lucifugus 100 0.0 894
WERAM-Hos-0198 ENSP00000302967.3 Homo sapiens 100 0.0 894
WERAM-Gog-0182 ENSGGOP00000015976.2 Gorilla gorilla 100 0.0 894
WERAM-Cap-0155 ENSCPOP00000012861.2 Cavia porcellus 100 0.0 894
WERAM-Caf-0075 ENSCAFP00000030390.2 Canis familiaris 100 0.0 894
WERAM-Caj-0192 ENSCJAP00000033421.2 Callithrix jacchus 100 0.0 894
WERAM-Aim-0114 ENSAMEP00000011012.1 Ailuropoda melanoleuca 100 0.0 894
WERAM-Mum-0059 ENSMUSP00000037981.7 Mus musculus 100 0.0 893
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 100 0.0 892
WERAM-Eqc-0167 ENSECAP00000018023.1 Equus caballus 100 0.0 891
WERAM-Sah-0124 ENSSHAP00000012846.1 Sarcophilus harrisii 99 0.0 890
WERAM-Mup-0085 ENSMPUP00000008127.1 Mustela putorius furo 99 0.0 888
WERAM-Ova-0007 ENSOARP00000000868.1 Ovis aries 99 0.0 888
WERAM-Otg-0013 ENSOGAP00000000543.2 Otolemur garnettii 99 0.0 884
WERAM-Fec-0077 ENSFCAP00000006409.3 Felis catus 99 0.0 884
WERAM-Dan-0065 ENSDNOP00000006447.2 Dasypus novemcinctus 99 0.0 884
WERAM-Mod-0086 ENSMODP00000013319.2 Monodelphis domestica 98 0.0 879
WERAM-Meg-0022 ENSMGAP00000001598.1 Meleagris gallopavo 98 0.0 877
WERAM-Gaga-0024 ENSGALP00000004141.3 Gallus gallus 98 0.0 877
WERAM-Nol-0100 ENSNLEP00000011707.1 Nomascus leucogenys 98 0.0 875
WERAM-Anc-0124 ENSACAP00000011701.2 Anolis carolinensis 97 0.0 869
WERAM-Tag-0179 ENSTGUP00000015405.1 Taeniopygia guttata 97 0.0 866
WERAM-Xet-0020 ENSXETP00000005840.3 Xenopus tropicalis 95 0.0 859
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 95 0.0 858
WERAM-Leo-0119 ENSLOCP00000014828.1 Lepisosteus oculatus 93 0.0 842
WERAM-Dar-0082 ENSDARP00000054625.5 Danio rerio 93 0.0 840
WERAM-Orn-0192 ENSONIP00000019932.1 Oreochromis niloticus 92 0.0 839
WERAM-Fia-0044 ENSFALP00000003005.1 Ficedula albicollis 97 0.0 837
WERAM-Pof-0043 ENSPFOP00000003698.2 Poecilia formosa 92 0.0 837
WERAM-Orla-0093 ENSORLP00000011294.1 Oryzias latipes 92 0.0 836
WERAM-Xim-0005 ENSXMAP00000000863.1 Xiphophorus maculatus 91 0.0 835
WERAM-Tut-0154 ENSTTRP00000013027.1 Tursiops truncatus 94 0.0 832
WERAM-Ran-0128 ENSRNOP00000071791.1 Rattus norvegicus 93 0.0 831
WERAM-Ten-0120 ENSTNIP00000013021.1 Tetraodon nigroviridis 91 0.0 828
WERAM-Gaa-0203 ENSGACP00000024795.1 Gasterosteus aculeatus 91 0.0 826
WERAM-Gam-0015 ENSGMOP00000001496.1 Gadus morhua 92 0.0 826
WERAM-Ptv-0171 ENSPVAP00000014750.1 Pteropus vampyrus 93 0.0 824
WERAM-Pes-0041 ENSPSIP00000006305.1 Pelodiscus sinensis 97 0.0 823
WERAM-Mim-0152 ENSMICP00000015894.1 Microcebus murinus 93 0.0 818
WERAM-Chh-0070 ENSCHOP00000007333.1 Choloepus hoffmanni 99 0.0 786
WERAM-Anp-0042 ENSAPLP00000004660.1 Anas platyrhynchos 97 0.0 779
WERAM-Prc-0116 ENSPCAP00000010084.1 Procavia capensis 89 0.0 775
WERAM-Mam-0105 ENSMMUP00000016525.1 Macaca mulatta 100 0.0 774
WERAM-Pem-0092 ENSPMAP00000009670.1 Petromyzon marinus 85 0.0 753
WERAM-Loa-0085 ENSLAFP00000006680.3 Loxodonta africana 99 0.0 724
WERAM-Tas-0075 ENSTSYP00000007464.1 Tarsius syrichta 88 0.0 719
WERAM-Tar-0077 ENSTRUP00000015206.1 Takifugu rubripes 87 0.0 712
WERAM-Tub-0054 ENSTBEP00000006507.1 Tupaia belangeri 100 0.0 696
WERAM-Cii-0013 ENSCINP00000004801.3 Ciona intestinalis 74 0.0 687
WERAM-Cis-0077 ENSCSAVP00000016740.1 Ciona savignyi 73 0.0 667
WERAM-Drm-0025 FBpp0078414 Drosophila melanogaster 66 6e-176 614
WERAM-Coi-0024 EAS33504 Coccidioides immitis 63 2e-156 549
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 62 2e-156 549
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 63 7e-156 547
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 62 3e-155 545
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 61 9e-155 543
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 62 2e-154 542
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 62 6e-154 541
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 63 6e-154 541
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 63 2e-153 539
WERAM-Dio-0123 ENSDORP00000011840.1 Dipodomys ordii 82 3e-153 538
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 65 4e-152 535
WERAM-Caa-0018 KGT69072 Candida albicans 58 2e-151 532
WERAM-Kop-0004 CAY67954 Komagataella pastoris 59 3e-151 532
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 58 3e-151 531
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 63 9e-151 530
WERAM-Ved-0020 EGY15146 Verticillium dahliae 62 2e-150 529
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 62 2e-150 529
WERAM-Asg-0034 AAS54885 Ashbya gossypii 59 2e-150 529
WERAM-Glm-0130 GLYMA11G19290.1 Glycine max 58 4e-150 528
WERAM-Art-0082 AT3G44680.1 Arabidopsis thaliana 58 1e-149 526
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 60 2e-149 526
WERAM-Trv-0003 EHK19072 Trichoderma virens 59 3e-149 525
WERAM-Bro-0059 Bo3g120880.1 Brassica oleracea 58 4e-149 525
WERAM-Cag-0003 CAG57932 Candida glabrata 61 1e-148 523
WERAM-Brr-0098 Bra019424.1-P Brassica rapa 58 1e-148 523
WERAM-Met-0097 AES88434 Medicago truncatula 58 2e-148 523
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 60 3e-148 522
WERAM-Thc-0114 EOY33523 Theobroma cacao 57 6e-148 521
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 60 1e-147 520
WERAM-Pot-0020 POPTR_0001s46430.1 Populus trichocarpa 58 1e-147 520
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 60 1e-147 520
WERAM-Org-0044 ORGLA04G0087200.1 Oryza glaberrima 58 1e-147 520
WERAM-Orni-0039 ONIVA04G09660.1 Oryza nivara 57 2e-147 519
WERAM-Ori-0051 BGIOSGA016344-PA Oryza indica 57 2e-147 519
WERAM-Orgl-0043 OGLUM04G11380.3 Oryza glumaepatula 57 2e-147 519
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 62 4e-147 518
WERAM-Orbr-0052 OB04G18820.1 Oryza brachyantha 57 5e-147 518
WERAM-Trr-0017 EGR48353 Trichoderma reesei 60 6e-147 518
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 59 7e-147 517
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 58 1e-146 517
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 57 2e-146 516
WERAM-Amt-0048 ERN13133 Amborella trichopoda 57 4e-146 515
WERAM-Orr-0042 ORUFI04G12890.1 Oryza rufipogon 57 7e-146 514
WERAM-Orb-0042 OBART04G11700.1 Oryza barthii 58 8e-146 514
WERAM-Sob-0086 Sb06g015420.1 Sorghum bicolor 60 2e-145 513
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 60 3e-145 512
WERAM-Soa-0041 ENSSARP00000003871.1 Sorex araneus 64 3e-145 512
WERAM-Mua-0089 GSMUA_Achr6P17260_001 Musa acuminata 55 5e-145 511
WERAM-Arl-0024 fgenesh1_pg.C_scaffold_5000937 Arabidopsis lyrata 56 5e-145 511
WERAM-Viv-0012 VIT_03s0038g04240.t01 Vitis vinifera 57 7e-145 511
WERAM-Orp-0042 OPUNC04G09700.1 Oryza punctata 57 9e-145 510
WERAM-Chr-0011 EDP01149 Chlamydomonas reinhardtii 57 1e-144 510
WERAM-Prp-0056 EMJ02177 Prunus persica 62 1e-144 509
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 54 2e-144 509
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 58 2e-144 509
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 59 2e-144 509
WERAM-Sei-0035 Si010167m Setaria italica 59 2e-144 509
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 57 3e-144 509
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 62 8e-144 507
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 56 9e-144 507
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 60 3e-143 505
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 61 7e-143 504
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 60 7e-143 504
WERAM-Zem-0071 GRMZM2G119703_P01 Zea mays 60 2e-142 502
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 61 2e-142 502
Created Date 25-Jun-2016