WERAM Information


Tag Content
WERAM ID WERAM-Sus-0176
Ensembl Protein ID ENSSSCP00000020572.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000025522.1 ENSSSCT00000024590.1 ENSSSCP00000020572.1
ENSSSCG00000025522.1 ENSSSCT00000030674.1 ENSSSCP00000024529.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 8.80e-107 357.4 2 527
HDAC Class-I 1.60e-19 71 40 246
Organism Sus scrofa
Domain Profile
  HDAC Class-II

           class-2.txt  41 gllekleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvR 129
gl +++++l ar+a++ el lvH + + ++ l++eel++l+ ++d++y++++++++arla+Ga+l+lvd+v++g ++ng+a+vR
ENSSSCP00000020572.1 2 GLEQRCLRLVAREASEAELGLVHRSGX----RGTQALSTEELQALSRQFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVR 86
7899*******************8754....5556899*************************************************** PP
class-2.txt 130 PPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkg 218
PPGHH+++++a+GFC+fn+va+aak++qqk+ +++ilivDwD+HhG+Gtq if++dp+vly+S+HRy++g+f+p + ++++d+vg+g+g
ENSSSCP00000020572.1 87 PPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRG 175
***************************************************************************************** PP
class-2.txt 219 egfnvNvawngglmgdaeylaafr.evvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkqllklaggrvvlvlE 301
+gf+vN++wn+ +mg+a+y+ af v+lp+a eF+ +lvlvsaGfD+a gd++g+++ t++c+a+lt+ l+ laggrv++vlE
ENSSSCP00000020572.1 176 LGFTVNLPWNQVGMGNADYMPAFLqXVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQVLAGGRVCAVLE 259
********************99964899*******************************************************9 PP
class-2.txt 222 nvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaG 262
+v v+++ ++ +l +vlp+a++F+Pdlvlv G
ENSSSCP00000020572.1 490 HVSVPLPRTT---GGFLSCVLALVLPLAYSFQPDLVLVVLG 527
5556655555...678888999****************987 PP

  HDAC Class-I

           class-1.txt  84 kkfnvgedcPvfd.glfeycqlitGasleaakkLnkkeadiainw.aGGlhhakkseasGfcyvnDivlailellkkh..krvlyidid 168
+ + + d+ f+ f+ ++l +Ga+l+ ++ + + ++ hh+++ a Gfc n + +a + ++kh +r+l +d d
ENSSSCP00000020572.1 40 QALSRQFDAVYFHpSTFHCARLAAGAALQLVDAVMAGVVRNGLALvRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHglHRILIVDWD 128
555555555555424677778899999999999998876655443133459********************9998876448******** PP
class-1.txt 169 lhhGDgveeafyttdrvmtvsfhkygee.ffPg..tGdlsdvgaekgkyyavnvPlkd.gidDesye.kifksviskvieafePeavvl 252
+hhG g + f+ v+ s h+y+++ f+P d + vg ++g ++vn+P ++ g+ + y + ++ v+ ++ f+ e v++
ENSSSCP00000020572.1 129 IHHGQGTQYIFEDDPSVLYFSWHRYEHGrFWPYlrESDADTVGRGRGLGFTVNLPWNQvGMGNADYMpAFLQXVLLPLAFEFNAELVLV 217
*************************98538885225788899999999*******9765999998872566899*************** PP
class-1.txt 253 qcGaDslagDrlgefnlsikghaecvkfv 281
G Ds gD g+ + + + +a+ +++
ENSSSCP00000020572.1 218 SAGFDSAIGDSEGQMQATPECFAHLTQLL 246
**************999999988876655 PP

Protein Sequence
(Fasta)
RGLEQRCLRL VAREASEAEL GLVHRSGXRG TQALSTEELQ ALSRQFDAVY FHPSTFHCAR 60
LAAGAALQLV DAVMAGVVRN GLALVRPPGH HSQRAAANGF CVFNSVAIAA KHAQQKHGLH 120
RILIVDWDIH HGQGTQYIFE DDPSVLYFSW HRYEHGRFWP YLRESDADTV GRGRGLGFTV 180
NLPWNQVGMG NADYMPAFLQ XVLLPLAFEF NAELVLVSAG FDSAIGDSEG QMQATPECFA 240
HLTQLLQVLA GGRVCAVLEV IAAGREDAGP EAEGQREGCE GALQSIQSVR AAQAPHWMSL 300
RQQASCAVAG SSTRSPGQGP SPPMPAGPEF KTAAAQAVAA LSSLLDQLRL RPTPPVRTAL 360
ALPAPLDGDL VLPDPGWAGE ASGGLGVAAE SEVEPCDLRR DGWVWSVYLL WELLSTAVTL 420
QVSSGIAATP GPAVAATLDV AIRGGVXNSS SRLLCVAVGQ LDRPPHLTDD GGTLWLNVGG 480
KEAAALSMFH VSVPLPRTTG GFLSCVLALV LPLAYSFQPD LVLVVLGPAH EAALLAALLR 540
GPAGGRVLAL VDEESTPQLA VVLARVLHGE APPSLGPFCM ASLETMQALM HLRGQLEPQW 600
KMLRVA 606
Nucleotide Sequence
(Fasta)
CGCGGACTGG AGCAGAGGTG CCTGCGGCTG GTAGCCCGAG AGGCCTCGGA GGCGGAGCTG 60
GGCCTGGTGC ACAGGTCAGG TNTGCGGGGA ACCCAGGCCT TGAGCACTGA GGAGCTCCAG 120
GCCCTATCCA GACAGTTCGA CGCCGTCTAC TTCCATCCGA GTACCTTCCA CTGTGCCCGG 180
TTGGCCGCAG GGGCTGCTCT GCAGCTGGTG GATGCAGTGA TGGCGGGAGT TGTGCGCAAC 240
GGTCTCGCCC TGGTGAGGCC GCCTGGGCAC CACAGCCAGA GGGCCGCCGC CAATGGATTC 300
TGCGTGTTCA ATAGTGTGGC CATAGCAGCC AAGCATGCCC AGCAGAAACA TGGACTGCAC 360
AGGATCCTCA TCGTTGACTG GGACATCCAC CATGGTCAGG GCACCCAGTA TATCTTTGAG 420
GATGACCCCA GCGTCCTTTA CTTCTCCTGG CACCGCTATG AGCACGGGCG CTTCTGGCCC 480
TACCTGCGAG AGTCTGATGC AGACACCGTC GGCCGCGGGC GGGGCCTTGG CTTCACGGTC 540
AACCTGCCCT GGAACCAGGT CGGGATGGGA AACGCAGATT ACATGCCCGC CTTCCTGCAG 600
GNGGTGCTGC TGCCCTTGGC CTTTGAGTTC AACGCCGAGC TGGTCCTGGT CTCCGCAGGG 660
TTTGACTCCG CAATCGGGGA TTCTGAGGGG CAGATGCAGG CCACGCCCGA GTGCTTCGCC 720
CACCTCACGC AGCTGCTGCA GGTGCTGGCT GGTGGCCGGG TCTGCGCTGT GCTGGAGGTG 780
ATCGCGGCGG GCAGGGAGGA CGCTGGGCCA GAGGCTGAGG GGCAGCGGGA GGGGTGCGAG 840
GGCGCCCTGC AGTCCATCCA GAGTGTCCGG GCAGCGCAGG CCCCTCACTG GATGAGCCTC 900
CGGCAGCAAG CCTCCTGTGC CGTGGCGGGG TCCAGCACTC GCTCCCCGGG GCAGGGGCCC 960
TCCCCTCCAA TGCCTGCGGG GCCTGAGTTC AAGACAGCAG CAGCCCAGGC CGTGGCTGCA 1020
CTCAGCTCCC TCCTGGACCA GCTACGCCTC CGTCCCACAC CCCCTGTCCG CACTGCTCTT 1080
GCCTTGCCTG CGCCACTGGA CGGTGACCTG GTCCTGCCCG ATCCTGGATG GGCAGGTGAG 1140
GCAAGTGGGG GGCTGGGGGT CGCAGCGGAG TCAGAAGTGG AGCCATGTGA CCTCAGAAGG 1200
GATGGATGGG TCTGGTCTGT TTACCTGCTT TGGGAGTTAC TCTCCACCGC TGTTACCTTG 1260
CAGGTGAGCA GCGGCATTGC AGCCACCCCA GGCCCTGCTG TAGCTGCCAC CCTGGACGTG 1320
GCCATTAGAG GTGGAGTGAN CAACTCTTCC TCCAGGCTGC TTTGTGTGGC TGTGGGACAG 1380
CTGGATCGGC CCCCCCATCT CACCGATGAC GGGGGGACTC TATGGCTGAA CGTCGGGGGC 1440
AAAGAGGCAG CTGCCCTGTC CATGTTCCAC GTCTCTGTGC CACTGCCAAG GACAACCGGT 1500
GGGTTCCTGA GCTGTGTCCT GGCCCTGGTG CTGCCCCTGG CCTACAGCTT CCAGCCTGAC 1560
CTGGTGCTGG TGGTACTGGG GCCTGCTCAT GAAGCTGCAC TCCTGGCTGC ACTGCTTCGG 1620
GGCCCAGCAG GGGGCCGAGT CTTGGCCCTT GTGGATGAGG AGTCCACACC CCAGCTTGCG 1680
GTGGTCCTGG CCAGGGTGCT GCATGGAGAG GCACCCCCCA GCCTGGGCCC CTTCTGCATG 1740
GCCTCCCTAG AGACCATGCA AGCCCTGATG CACTTGAGGG GGCAGCTGGA GCCACAGTGG 1800
AAGATGCTGC GAGTGGCC 1819
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Aim-0036 ENSAMEP00000002564.1 Ailuropoda melanoleuca 67 0.0 719
WERAM-Tut-0141 ENSTTRP00000011664.1 Tursiops truncatus 70 0.0 719
WERAM-Ova-0212 ENSOARP00000021243.1 Ovis aries 70 0.0 706
WERAM-Bot-0106 ENSBTAP00000014602.4 Bos taurus 68 0.0 702
WERAM-Myl-0003 ENSMLUP00000000417.2 Myotis lucifugus 68 0.0 697
WERAM-Mup-0023 ENSMPUP00000002307.1 Mustela putorius furo 66 0.0 695
WERAM-Eqc-0086 ENSECAP00000010704.1 Equus caballus 67 0.0 694
WERAM-Caf-0004 ENSCAFP00000000979.4 Canis familiaris 66 0.0 690
WERAM-Ict-0132 ENSSTOP00000013675.2 Ictidomys tridecemlineatus 64 0.0 684
WERAM-Fec-0119 ENSFCAP00000011049.3 Felis catus 66 0.0 681
WERAM-Hos-0058 ENSP00000216271.5 Homo sapiens 65 0.0 673
WERAM-Pat-0122 ENSPTRP00000025053.4 Pan troglodytes 64 0.0 673
WERAM-Otg-0149 ENSOGAP00000012689.2 Otolemur garnettii 62 0.0 669
WERAM-Gog-0159 ENSGGOP00000014095.2 Gorilla gorilla 65 0.0 668
WERAM-Ere-0078 ENSEEUP00000006690.1 Erinaceus europaeus 63 0.0 668
WERAM-Nol-0005 ENSNLEP00000000692.2 Nomascus leucogenys 67 0.0 664
WERAM-Chs-0051 ENSCSAP00000001305.1 Chlorocebus sabaeus 66 0.0 660
WERAM-Paa-0009 ENSPANP00000013655.1 Papio anubis 65 0.0 652
WERAM-Orc-0191 ENSOCUP00000020861.2 Oryctolagus cuniculus 65 0.0 640
WERAM-Cap-0164 ENSCPOP00000013386.2 Cavia porcellus 60 0.0 630
WERAM-Mam-0123 ENSMMUP00000018537.2 Macaca mulatta 63 2e-178 622
WERAM-Caj-0034 ENSCJAP00000006067.1 Callithrix jacchus 62 4e-178 622
WERAM-Mum-0213 ENSMUSP00000080832.5 Mus musculus 57 6e-172 601
WERAM-Poa-0105 ENSPPYP00000013362.1 Pongo abelii 60 7e-160 561
WERAM-Ptv-0046 ENSPVAP00000004918.1 Pteropus vampyrus 59 7e-159 558
WERAM-Tub-0095 ENSTBEP00000011284.1 Tupaia belangeri 57 3e-158 556
WERAM-Pes-0141 ENSPSIP00000016742.1 Pelodiscus sinensis 41 1e-129 461
WERAM-Fia-0117 ENSFALP00000010126.1 Ficedula albicollis 41 1e-129 461
WERAM-Meg-0084 ENSMGAP00000008226.2 Meleagris gallopavo 42 2e-127 453
WERAM-Dan-0147 ENSDNOP00000022283.1 Dasypus novemcinctus 54 2e-127 453
WERAM-Lac-0157 ENSLACP00000018610.1 Latimeria chalumnae 42 5e-127 452
WERAM-Anp-0022 ENSAPLP00000003127.1 Anas platyrhynchos 41 1e-124 444
WERAM-Gaga-0090 ENSGALP00000014065.4 Gallus gallus 40 3e-120 429
WERAM-Xet-0171 ENSXETP00000064083.1 Xenopus tropicalis 40 4e-119 426
WERAM-Ran-0176 ENSRNOP00000052717.2 Rattus norvegicus 81 1e-116 418
WERAM-Sah-0095 ENSSHAP00000011018.1 Sarcophilus harrisii 63 1e-116 417
WERAM-Mae-0029 ENSMEUP00000002095.1 Macropus eugenii 67 7e-116 415
WERAM-Gaa-0030 ENSGACP00000005071.1 Gasterosteus aculeatus 41 5e-115 412
WERAM-Mod-0049 ENSMODP00000006876.3 Monodelphis domestica 62 6e-113 405
WERAM-Tar-0203 ENSTRUP00000042351.1 Takifugu rubripes 41 9e-113 405
WERAM-Xim-0154 ENSXMAP00000012744.1 Xiphophorus maculatus 44 1e-112 404
WERAM-Orla-0095 ENSORLP00000011723.1 Oryzias latipes 39 3e-112 403
WERAM-Anc-0012 ENSACAP00000019114.1 Anolis carolinensis 60 2e-111 400
WERAM-Ect-0100 ENSETEP00000011415.1 Echinops telfairi 80 7e-111 398
WERAM-Pof-0123 ENSPFOP00000010612.2 Poecilia formosa 57 1e-107 388
WERAM-Orn-0102 ENSONIP00000011058.1 Oreochromis niloticus 56 2e-107 387
WERAM-Tag-0059 ENSTGUP00000004152.1 Taeniopygia guttata 68 7e-105 379
WERAM-Dar-0187 ENSDARP00000109870.2 Danio rerio 57 2e-104 377
WERAM-Asm-0162 ENSAMXP00000016088.1 Astyanax mexicanus 55 3e-104 376
WERAM-Loa-0176 ENSLAFP00000017654.2 Loxodonta africana 58 2e-103 374
WERAM-Gam-0051 ENSGMOP00000005244.1 Gadus morhua 55 5e-102 369
WERAM-Leo-0157 ENSLOCP00000018907.1 Lepisosteus oculatus 57 3e-100 363
WERAM-Prc-0016 ENSPCAP00000001410.1 Procavia capensis 83 9e-100 362
WERAM-Ten-0019 ENSTNIP00000004593.1 Tetraodon nigroviridis 47 1e-82 304
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 48 1e-81 301
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 52 5e-78 289
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 56 7e-78 289
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 48 3e-73 273
WERAM-Soa-0022 ENSSARP00000002183.1 Sorex araneus 49 2e-70 264
WERAM-Ora-0024 ENSOANP00000003575.1 Ornithorhynchus anatinus 60 4e-68 256
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 47 4e-67 253
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 43 9e-66 248
WERAM-Coi-0028 EAS30926 Coccidioides immitis 46 3e-65 247
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 40 2e-63 241
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 45 3e-63 240
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 46 1e-62 238
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 44 4e-62 236
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 38 6e-62 236
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 44 1e-60 231
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 44 2e-60 230
WERAM-Cag-0018 CAG60803 Candida glabrata 43 3e-60 230
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 42 4e-60 230
WERAM-Tas-0021 ENSTSYP00000002661.1 Tarsius syrichta 58 4e-60 230
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 43 5e-60 229
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 44 8e-60 229
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 40 3e-59 227
WERAM-Asg-0010 AAS51704 Ashbya gossypii 42 3e-59 227
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 43 4e-58 223
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 37 4e-58 223
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 38 5e-58 223
WERAM-Phn-0010 SNOT_01279 Phaeosphaeria nodorum 45 5e-58 223
WERAM-Chg-0033 EAQ86725 Chaetomium globosum 40 6e-58 223
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 39 2e-57 221
WERAM-Gag-0014 GGTG_04308T0 Gaeumannomyces graminis 39 2e-57 221
WERAM-Map-0033 MAPG_10880T0 Magnaporthe poae 40 2e-57 220
WERAM-Brr-0068 Bra012984.1-P Brassica rapa 37 3e-57 220
WERAM-Bro-0134 Bo7g098310.1 Brassica oleracea 37 5e-57 219
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 38 1e-56 218
WERAM-Caa-0034 KGT64501 Candida albicans 40 2e-56 218
WERAM-Orp-0076 OPUNC07G19850.1 Oryza punctata 41 2e-56 218
WERAM-Usm-0012 UM02102P0 Ustilago maydis 43 2e-56 217
WERAM-Php-0085 PP1S34_252V6.1 Physcomitrella patens 40 4e-56 216
WERAM-Ori-0088 BGIOSGA026083-PA Oryza indica 41 5e-56 216
WERAM-Fuo-0035 FOXG_13914P0 Fusarium oxysporum 38 5e-56 216
WERAM-Kop-0012 CAY68916 Komagataella pastoris 41 5e-56 216
WERAM-Orgl-0076 OGLUM07G21150.1 Oryza glumaepatula 41 6e-56 216
WERAM-Tra-0016 Traes_1BL_9084A78D6.1 Triticum aestivum 40 6e-56 216
WERAM-Ors-0072 OS07T0602200-01 Oryza sativa 41 6e-56 216
WERAM-Orr-0082 ORUFI07G22240.1 Oryza rufipogon 41 6e-56 216
WERAM-Lep-0079 LPERR07G18450.1 Leersia perrieri 40 7e-56 216
WERAM-Arl-0149 scaffold_802745.1 Arabidopsis lyrata 35 7e-56 216
WERAM-Orni-0078 ONIVA07G19970.1 Oryza nivara 41 8e-56 215
WERAM-Aso-0015 CADAORAP00001816 Aspergillus oryzae 45 1e-55 215
WERAM-Orbr-0087 OB07G26850.1 Oryza brachyantha 40 1e-55 215
WERAM-Nec-0012 EFNCRP00000001681 Neurospora crassa 39 2e-55 214
WERAM-Tru-0053 TRIUR3_22556-P1 Triticum urartu 40 2e-55 214
WERAM-Trv-0041 EHK18675 Trichoderma virens 37 2e-55 214
WERAM-Org-0078 ORGLA07G0164500.1 Oryza glaberrima 41 3e-55 213
WERAM-Orb-0079 OBART07G21300.1 Oryza barthii 41 4e-55 213
WERAM-Brd-0010 BRADI1G22240.1 Brachypodium distachyon 40 5e-55 213
WERAM-Art-0146 AT5G61060.1 Arabidopsis thaliana 35 8e-55 212
WERAM-Pug-0031 EFP89333 Puccinia graminis 43 9e-55 212
WERAM-Glm-0045 GLYMA05G00460.1 Glycine max 40 2e-54 211
WERAM-Aet-0030 EMT21577 Aegilops tauschii 41 3e-54 210
WERAM-Sob-0036 Sb02g038550.1 Sorghum bicolor 40 3e-54 210
WERAM-Ved-0005 EGY17208 Verticillium dahliae 37 4e-54 210
WERAM-Zyt-0016 Mycgr3P37223 Zymoseptoria tritici 42 4e-54 210
WERAM-Trr-0039 EGR46026 Trichoderma reesei 37 6e-54 209
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 42 1e-53 208
WERAM-Orl-0040 KN538895.1_FGP007 Oryza longistaminata 41 1e-53 208
WERAM-Sol-0055 Solyc03g115150.2.1 Solanum lycopersicum 35 2e-53 208
WERAM-Sei-0109 Si029091m Setaria italica 39 3e-53 207
WERAM-Mim-0158 ENSMICP00000016201.1 Microcebus murinus 81 3e-53 207
WERAM-Met-0112 KEH32016 Medicago truncatula 36 3e-53 207
WERAM-Zem-0143 GRMZM2G457889_P01 Zea mays 39 5e-53 206
WERAM-Hov-0018 MLOC_16422.1 Hordeum vulgare 40 8e-53 206
WERAM-Amt-0091 ERM99985 Amborella trichopoda 38 9e-53 205
WERAM-Prp-0049 EMJ12067 Prunus persica 35 9e-53 205
WERAM-Mua-0066 GSMUA_Achr4P03250_001 Musa acuminata 39 4e-52 203
WERAM-Asfu-0010 CADAFUAP00002902 Aspergillus fumigatus 42 1e-51 202
Created Date 25-Jun-2016