Tag |
Content |
WERAM ID |
WERAM-Sus-0176 |
Ensembl Protein ID |
ENSSSCP00000020572.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
8.80e-107 |
357.4 |
2 |
527 |
HDAC |
Class-I |
1.60e-19 |
71 |
40 |
246 |
|
Organism |
Sus scrofa |
Domain Profile |
HDAC Class-II
class-2.txt 41 gllekleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvR 129 gl +++++l ar+a++ el lvH + + ++ l++eel++l+ ++d++y++++++++arla+Ga+l+lvd+v++g ++ng+a+vR ENSSSCP00000020572.1 2 GLEQRCLRLVAREASEAELGLVHRSGX----RGTQALSTEELQALSRQFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVR 86 7899*******************8754....5556899*************************************************** PP class-2.txt 130 PPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkg 218 PPGHH+++++a+GFC+fn+va+aak++qqk+ +++ilivDwD+HhG+Gtq if++dp+vly+S+HRy++g+f+p + ++++d+vg+g+g ENSSSCP00000020572.1 87 PPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRG 175 ***************************************************************************************** PP class-2.txt 219 egfnvNvawngglmgdaeylaafr.evvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkqllklaggrvvlvlE 301 +gf+vN++wn+ +mg+a+y+ af v+lp+a eF+ +lvlvsaGfD+a gd++g+++ t++c+a+lt+ l+ laggrv++vlE ENSSSCP00000020572.1 176 LGFTVNLPWNQVGMGNADYMPAFLqXVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQVLAGGRVCAVLE 259 ********************99964899*******************************************************9 PP class-2.txt 222 nvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaG 262 +v v+++ ++ +l +vlp+a++F+Pdlvlv G ENSSSCP00000020572.1 490 HVSVPLPRTT---GGFLSCVLALVLPLAYSFQPDLVLVVLG 527 5556655555...678888999****************987 PP
HDAC Class-I
class-1.txt 84 kkfnvgedcPvfd.glfeycqlitGasleaakkLnkkeadiainw.aGGlhhakkseasGfcyvnDivlailellkkh..krvlyidid 168 + + + d+ f+ f+ ++l +Ga+l+ ++ + + ++ hh+++ a Gfc n + +a + ++kh +r+l +d d ENSSSCP00000020572.1 40 QALSRQFDAVYFHpSTFHCARLAAGAALQLVDAVMAGVVRNGLALvRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHglHRILIVDWD 128 555555555555424677778899999999999998876655443133459********************9998876448******** PP class-1.txt 169 lhhGDgveeafyttdrvmtvsfhkygee.ffPg..tGdlsdvgaekgkyyavnvPlkd.gidDesye.kifksviskvieafePeavvl 252 +hhG g + f+ v+ s h+y+++ f+P d + vg ++g ++vn+P ++ g+ + y + ++ v+ ++ f+ e v++ ENSSSCP00000020572.1 129 IHHGQGTQYIFEDDPSVLYFSWHRYEHGrFWPYlrESDADTVGRGRGLGFTVNLPWNQvGMGNADYMpAFLQXVLLPLAFEFNAELVLV 217 *************************98538885225788899999999*******9765999998872566899*************** PP class-1.txt 253 qcGaDslagDrlgefnlsikghaecvkfv 281 G Ds gD g+ + + + +a+ +++ ENSSSCP00000020572.1 218 SAGFDSAIGDSEGQMQATPECFAHLTQLL 246 **************999999988876655 PP
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Protein Sequence (Fasta) | RGLEQRCLRL VAREASEAEL GLVHRSGXRG TQALSTEELQ ALSRQFDAVY FHPSTFHCAR 60 LAAGAALQLV DAVMAGVVRN GLALVRPPGH HSQRAAANGF CVFNSVAIAA KHAQQKHGLH 120 RILIVDWDIH HGQGTQYIFE DDPSVLYFSW HRYEHGRFWP YLRESDADTV GRGRGLGFTV 180 NLPWNQVGMG NADYMPAFLQ XVLLPLAFEF NAELVLVSAG FDSAIGDSEG QMQATPECFA 240 HLTQLLQVLA GGRVCAVLEV IAAGREDAGP EAEGQREGCE GALQSIQSVR AAQAPHWMSL 300 RQQASCAVAG SSTRSPGQGP SPPMPAGPEF KTAAAQAVAA LSSLLDQLRL RPTPPVRTAL 360 ALPAPLDGDL VLPDPGWAGE ASGGLGVAAE SEVEPCDLRR DGWVWSVYLL WELLSTAVTL 420 QVSSGIAATP GPAVAATLDV AIRGGVXNSS SRLLCVAVGQ LDRPPHLTDD GGTLWLNVGG 480 KEAAALSMFH VSVPLPRTTG GFLSCVLALV LPLAYSFQPD LVLVVLGPAH EAALLAALLR 540 GPAGGRVLAL VDEESTPQLA VVLARVLHGE APPSLGPFCM ASLETMQALM HLRGQLEPQW 600 KMLRVA 606Protein Fasta Sequence
>ENSSSCP00000020572.1|Class-I|Sus scrofa RGLEQRCLRLVAREASEAELGLVHRSGXRGTQALSTEELQALSRQFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMPAFLQXVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQVLAGGRVCAVLEVIAAGREDAGPEAEGQREGCEGALQSIQSVRAAQAPHWMSLRQQASCAVAGSSTRSPGQGPSPPMPAGPEFKTAAAQAVAALSSLLDQLRLRPTPPVRTALALPAPLDGDLVLPDPGWAGEASGGLGVAAESEVEPCDLRRDGWVWSVYLLWELLSTAVTLQVSSGIAATPGPAVAATLDVAIRGGVXNSSSRLLCVAVGQLDRPPHLTDDGGTLWLNVGGKEAAALSMFHVSVPLPRTTGGFLSCVLALVLPLAYSFQPDLVLVVLGPAHEAALLAALLRGPAGGRVLALVDEESTPQLAVVLARVLHGEAPPSLGPFCMASLETMQALMHLRGQLEPQWKMLRVA
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Nucleotide Sequence (Fasta) | CGCGGACTGG AGCAGAGGTG CCTGCGGCTG GTAGCCCGAG AGGCCTCGGA GGCGGAGCTG 60 GGCCTGGTGC ACAGGTCAGG TNTGCGGGGA ACCCAGGCCT TGAGCACTGA GGAGCTCCAG 120 GCCCTATCCA GACAGTTCGA CGCCGTCTAC TTCCATCCGA GTACCTTCCA CTGTGCCCGG 180 TTGGCCGCAG GGGCTGCTCT GCAGCTGGTG GATGCAGTGA TGGCGGGAGT TGTGCGCAAC 240 GGTCTCGCCC TGGTGAGGCC GCCTGGGCAC CACAGCCAGA GGGCCGCCGC CAATGGATTC 300 TGCGTGTTCA ATAGTGTGGC CATAGCAGCC AAGCATGCCC AGCAGAAACA TGGACTGCAC 360 AGGATCCTCA TCGTTGACTG GGACATCCAC CATGGTCAGG GCACCCAGTA TATCTTTGAG 420 GATGACCCCA GCGTCCTTTA CTTCTCCTGG CACCGCTATG AGCACGGGCG CTTCTGGCCC 480 TACCTGCGAG AGTCTGATGC AGACACCGTC GGCCGCGGGC GGGGCCTTGG CTTCACGGTC 540 AACCTGCCCT GGAACCAGGT CGGGATGGGA AACGCAGATT ACATGCCCGC CTTCCTGCAG 600 GNGGTGCTGC TGCCCTTGGC CTTTGAGTTC AACGCCGAGC TGGTCCTGGT CTCCGCAGGG 660 TTTGACTCCG CAATCGGGGA TTCTGAGGGG CAGATGCAGG CCACGCCCGA GTGCTTCGCC 720 CACCTCACGC AGCTGCTGCA GGTGCTGGCT GGTGGCCGGG TCTGCGCTGT GCTGGAGGTG 780 ATCGCGGCGG GCAGGGAGGA CGCTGGGCCA GAGGCTGAGG GGCAGCGGGA GGGGTGCGAG 840 GGCGCCCTGC AGTCCATCCA GAGTGTCCGG GCAGCGCAGG CCCCTCACTG GATGAGCCTC 900 CGGCAGCAAG CCTCCTGTGC CGTGGCGGGG TCCAGCACTC GCTCCCCGGG GCAGGGGCCC 960 TCCCCTCCAA TGCCTGCGGG GCCTGAGTTC AAGACAGCAG CAGCCCAGGC CGTGGCTGCA 1020 CTCAGCTCCC TCCTGGACCA GCTACGCCTC CGTCCCACAC CCCCTGTCCG CACTGCTCTT 1080 GCCTTGCCTG CGCCACTGGA CGGTGACCTG GTCCTGCCCG ATCCTGGATG GGCAGGTGAG 1140 GCAAGTGGGG GGCTGGGGGT CGCAGCGGAG TCAGAAGTGG AGCCATGTGA CCTCAGAAGG 1200 GATGGATGGG TCTGGTCTGT TTACCTGCTT TGGGAGTTAC TCTCCACCGC TGTTACCTTG 1260 CAGGTGAGCA GCGGCATTGC AGCCACCCCA GGCCCTGCTG TAGCTGCCAC CCTGGACGTG 1320 GCCATTAGAG GTGGAGTGAN CAACTCTTCC TCCAGGCTGC TTTGTGTGGC TGTGGGACAG 1380 CTGGATCGGC CCCCCCATCT CACCGATGAC GGGGGGACTC TATGGCTGAA CGTCGGGGGC 1440 AAAGAGGCAG CTGCCCTGTC CATGTTCCAC GTCTCTGTGC CACTGCCAAG GACAACCGGT 1500 GGGTTCCTGA GCTGTGTCCT GGCCCTGGTG CTGCCCCTGG CCTACAGCTT CCAGCCTGAC 1560 CTGGTGCTGG TGGTACTGGG GCCTGCTCAT GAAGCTGCAC TCCTGGCTGC ACTGCTTCGG 1620 GGCCCAGCAG GGGGCCGAGT CTTGGCCCTT GTGGATGAGG AGTCCACACC CCAGCTTGCG 1680 GTGGTCCTGG CCAGGGTGCT GCATGGAGAG GCACCCCCCA GCCTGGGCCC CTTCTGCATG 1740 GCCTCCCTAG AGACCATGCA AGCCCTGATG CACTTGAGGG GGCAGCTGGA GCCACAGTGG 1800 AAGATGCTGC GAGTGGCC
1819Nucleotide Fasta Sequence
>ENSSSCP00000020572.1|Class-I|Sus scrofa CGCGGACTGGAGCAGAGGTGCCTGCGGCTGGTAGCCCGAGAGGCCTCGGAGGCGGAGCTGGGCCTGGTGCACAGGTCAGGTNTGCGGGGAACCCAGGCCTTGAGCACTGAGGAGCTCCAGGCCCTATCCAGACAGTTCGACGCCGTCTACTTCCATCCGAGTACCTTCCACTGTGCCCGGTTGGCCGCAGGGGCTGCTCTGCAGCTGGTGGATGCAGTGATGGCGGGAGTTGTGCGCAACGGTCTCGCCCTGGTGAGGCCGCCTGGGCACCACAGCCAGAGGGCCGCCGCCAATGGATTCTGCGTGTTCAATAGTGTGGCCATAGCAGCCAAGCATGCCCAGCAGAAACATGGACTGCACAGGATCCTCATCGTTGACTGGGACATCCACCATGGTCAGGGCACCCAGTATATCTTTGAGGATGACCCCAGCGTCCTTTACTTCTCCTGGCACCGCTATGAGCACGGGCGCTTCTGGCCCTACCTGCGAGAGTCTGATGCAGACACCGTCGGCCGCGGGCGGGGCCTTGGCTTCACGGTCAACCTGCCCTGGAACCAGGTCGGGATGGGAAACGCAGATTACATGCCCGCCTTCCTGCAGGNGGTGCTGCTGCCCTTGGCCTTTGAGTTCAACGCCGAGCTGGTCCTGGTCTCCGCAGGGTTTGACTCCGCAATCGGGGATTCTGAGGGGCAGATGCAGGCCACGCCCGAGTGCTTCGCCCACCTCACGCAGCTGCTGCAGGTGCTGGCTGGTGGCCGGGTCTGCGCTGTGCTGGAGGTGATCGCGGCGGGCAGGGAGGACGCTGGGCCAGAGGCTGAGGGGCAGCGGGAGGGGTGCGAGGGCGCCCTGCAGTCCATCCAGAGTGTCCGGGCAGCGCAGGCCCCTCACTGGATGAGCCTCCGGCAGCAAGCCTCCTGTGCCGTGGCGGGGTCCAGCACTCGCTCCCCGGGGCAGGGGCCCTCCCCTCCAATGCCTGCGGGGCCTGAGTTCAAGACAGCAGCAGCCCAGGCCGTGGCTGCACTCAGCTCCCTCCTGGACCAGCTACGCCTCCGTCCCACACCCCCTGTCCGCACTGCTCTTGCCTTGCCTGCGCCACTGGACGGTGACCTGGTCCTGCCCGATCCTGGATGGGCAGGTGAGGCAAGTGGGGGGCTGGGGGTCGCAGCGGAGTCAGAAGTGGAGCCATGTGACCTCAGAAGGGATGGATGGGTCTGGTCTGTTTACCTGCTTTGGGAGTTACTCTCCACCGCTGTTACCTTGCAGGTGAGCAGCGGCATTGCAGCCACCCCAGGCCCTGCTGTAGCTGCCACCCTGGACGTGGCCATTAGAGGTGGAGTGANCAACTCTTCCTCCAGGCTGCTTTGTGTGGCTGTGGGACAGCTGGATCGGCCCCCCCATCTCACCGATGACGGGGGGACTCTATGGCTGAACGTCGGGGGCAAAGAGGCAGCTGCCCTGTCCATGTTCCACGTCTCTGTGCCACTGCCAAGGACAACCGGTGGGTTCCTGAGCTGTGTCCTGGCCCTGGTGCTGCCCCTGGCCTACAGCTTCCAGCCTGACCTGGTGCTGGTGGTACTGGGGCCTGCTCATGAAGCTGCACTCCTGGCTGCACTGCTTCGGGGCCCAGCAGGGGGCCGAGTCTTGGCCCTTGTGGATGAGGAGTCCACACCCCAGCTTGCGGTGGTCCTGGCCAGGGTGCTGCATGGAGAGGCACCCCCCAGCCTGGGCCCCTTCTGCATGGCCTCCCTAGAGACCATGCAAGCCCTGATGCACTTGAGGGGGCAGCTGGAGCCACAGTGGAAGATGCTGCGAGTGGCC
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |