WERAM Information


Tag Content
WERAM ID WERAM-Poa-0116
Ensembl Protein ID ENSPPYP00000014905.2
Gene Name HDAC4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPPYG00000013328.2 ENSPPYT00000015502.2 ENSPPYP00000014905.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 4.10e-120 400.9 94 960
HDAC Class-I 2.40e-14 53.7 114 925
Organism Pongo abelii
Domain Profile
  HDAC Class-II

           class-2.txt  10 mlkhqale.enkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeelesltvd 88 
+ +h+ l+ +++++ E+ + q++l + ++++lle+ +l+ r+ +++el++ H e+ +++l+++ek +++ ++s++v+
ENSPPYP00000014905.2 94 QRQHEQLSrQHEAQLHEHIKQQQEMLAMKHQQELLEHQRKLE-RHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVK 172
455555440445557889999999999999999999988886.66778899999*9999999999998888888775444 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84
+glvyd+ mlkhq++++++++hpE+++Riq+i+srlqe+gl++k+e++++rkat+eelq+vHse+h+ l++t+ +l++++l+s
ENSPPYP00000014905.2 654 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTN-PLNRQKLDSkkllgs 741
79***********************************************************************.*************** PP
class-2.txt 85 ............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeesta 140
++vdsd+i++e++s+ aarlavG+v+elv+kv++gelkngfavvRPPGHHaeest+
ENSPPYP00000014905.2 742 lasvfvrlpcggVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTP 809
*****************************************************************997 PP
class-2.txt 171 DvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlpiakeFkPdl 256
DvHhGnGtq +fy+dp+vly+SlHRyd+g+ fp g++devg+g+g+gfnvN+a++ggl mgdaeylaafr+vv+pia+eF+Pd+
ENSPPYP00000014905.2 810 DVHHGNGTQ-AFYSDPSVLYVSLHRYDDGN-FP----GSADEVGTGPGVGFNVNMAFTGGLdppMGDAEYLAAFRTVVMPIASEFAPDV 892
9*******8.79******************.56....689************************************************* PP
class-2.txt 257 vlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
vlvs+GfDa+eg +plgg++++a+c+++ltkql++laggr+vl+lEGG++l+ai++a+ea+v+aLlg
ENSPPYP00000014905.2 893 VLVSSGFDAVEGhpTPLGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLG 960
************9*****************************************************96 PP

  HDAC Class-I

           class-1.txt  29 ltheLvlnyglskkleivk..pkkasaeellkfhseeyieflkkvepenae.....elskelkkfnvg 89 
+e++ + ++ le + ++ + +el k h+e+ ++ lk+ e+ +++ e++ +l++f ++
ENSPPYP00000014905.2 114 QQQEMLAMKHQQELLEHQRklERHRQEQELEKQHREQKLQQLKNKEKGKESavastEVKMKLQEFVLN 181
33332222222222222220134556789999999999999999988877733333333455666555 PP
class-1.txt 17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseey 64
+++hp r++ + + + + gl k e ++ +ka+ eel+++hse++
ENSPPYP00000014905.2 672 SSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAH 719
678999999999999999**************************9875 PP
class-1.txt 168 dlhhGDgveeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvl 252
d+hhG+g +afy v+ vs+h+y+++ fPg+ d +vg++ g + vn+ ++ g+d D +y + f++v+ ++ + f P++v++
ENSPPYP00000014905.2 810 DVHHGNGT-QAFYSDPSVLYVSLHRYDDGNFPGSAD--EVGTGPGVGFNVNMAFTGGLDppmgDAEYLAAFRTVVMPIASEFAPDVVLV 895
9******7.59*********************9876..778888888******99997666669************************* PP
class-1.txt 253 qcGaDslagD..rlgefnlsikghaecvkf 280
G D++ g +lg +nls + ++ k
ENSPPYP00000014905.2 896 SSGFDAVEGHptPLGGYNLSARCFGYLTKQ 925
*******9963369******9998876655 PP

Protein Sequence
(Fasta)
MSSQSHPDGL SGRDQPVELL NPARVNHMPS TVDVATALPL QVAPSAVPMD LRLDHQFSLP 60
VAEPALREQQ LQQELLALKQ KQQIQRQILI AEFQRQHEQL SRQHEAQLHE HIKQQQEMLA 120
MKHQQELLEH QRKLERHRQE QELEKQHREQ KLQQLKNKEK GKESAVASTE VKMKLQEFVL 180
NKKKALAHRN LNHCISSDPR YWYGKTQHSS LDQSSPPQSG VSTSYNHPVL GMYDAKDDFP 240
LRKTASEPNL KLRSRLKQKV AERRSSPLLR RKDGPVVTAL KKRPLDVTDS ACSSAPGSGP 300
SSPNNSSGSV SAENGITPTV PSIPAETSLA HRLVAREGSA APLPLYTSPS LPNITLGLPA 360
TGPSAGTAGQ QDAERLALPA LQQRLSLFPG THLTPYLSTS PLERDGGAAH SPLLQHMVLL 420
EQPPAQAPLV TGLGALPLHA QSLVGADRVS PSIHKLRQHR PLGRTQSAPL PQNAQALQHL 480
VIQQQHQQFL EKHKQQFQQQ QLHMNKIIPK PSEPARQPES HPEETEEELR EHQALLDEPY 540
LDRLPGQKEA HAPAGVQVKQ EPIESDDEEA EPPREVEPGQ RQPSEQELLF RQQALLLEQQ 600
RIHQLRNYQA SMEAAGIPVS FGGHRPLSRA QSSPASATFP VSVQEPPTKP RFTTGLVYDT 660
LMLKHQCTCG SSSSHPEHAG RIQSIWSRLQ ETGLRGKCEC IRGRKATLEE LQTVHSEAHT 720
LLYGTNPLNR QKLDSKKLLG SLASVFVRLP CGGVGVDSDT IWNEVHSAGA ARLAVGCVVE 780
LVFKVATGEL KNGFAVVRPP GHHAEESTPD VHHGNGTQAF YSDPSVLYVS LHRYDDGNFP 840
GSADEVGTGP GVGFNVNMAF TGGLDPPMGD AEYLAAFRTV VMPIASEFAP DVVLVSSGFD 900
AVEGHPTPLG GYNLSARCFG YLTKQLMGLA GGRIVLALEG GHDLTAICDA SEACVSALLG 960
NELDPLPEKV LQQRPNANAV RSMEKVMEIH SKYWRCLQRA TSTAGRSLIE AQTCENEEAE 1020
TVTAMASLSV GVKPAEKRPD EEPMEEEPPL
Nucleotide Sequence
(Fasta)
GTTCATCTGC AGAAGCCACG GACGCCTCTG TTCTCCTTGT GGGTTACCTG GCTCATGAGA 60
CCTTGCCGGC GAGGCTCGGC GCTTGAACGT CTGTGACCCA GCCCTCACCA TCCCGGTACT 120
TGTATGTGTT GGTGGGAGTT TGGAGCTCGT TGGAGCTATC ATTTCCGTGG AAATTTTGAG 180
ACATTTCAAA TCACTTACAA GAGTGGACGT TGCTAGCAAT GAGCTCCCAA AGCCATCCAG 240
ATGGACTTTC TGGCCGAGAC CAGCCAGTGG AGCTGCTGAA TCCTGCCCGC GTGAACCACA 300
TGCCCAGCAC GGTGGATGTG GCCACGGCGC TGCCTCTGCA AGTGGCCCCC TCGGCAGTGC 360
CCATGGACCT GCGCCTGGAC CACCAGTTCT CACTGCCTGT GGCAGAGCCG GCCCTGCGGG 420
AGCAGCAGCT GCAGCAGGAG CTCCTGGCGC TCAAGCAGAA GCAGCAGATC CAGAGGCAGA 480
TCCTCATCGC CGAGTTCCAG AGACAGCACG AGCAGCTCTC CCGGCAGCAC GAGGCGCAGC 540
TCCACGAGCA CATCAAGCAA CAGCAGGAGA TGCTGGCCAT GAAGCACCAG CAGGAGCTGC 600
TGGAACACCA GCGGAAGCTG GAGAGGCACC GCCAGGAGCA GGAGCTGGAG AAGCAGCACC 660
GGGAGCAGAA GCTGCAGCAG CTCAAGAACA AGGAGAAGGG CAAAGAGAGT GCCGTGGCCA 720
GCACGGAAGT GAAGATGAAG TTACAAGAAT TTGTCCTCAA TAAAAAGAAG GCGCTGGCCC 780
ACCGGAATCT GAACCACTGC ATTTCCAGCG ACCCTCGCTA CTGGTACGGG AAAACGCAGC 840
ACAGTTCCCT TGACCAGAGT TCTCCACCCC AGAGCGGAGT GTCGACCTCC TATAACCACC 900
CGGTCCTGGG AATGTACGAC GCCAAAGATG ACTTCCCTCT TAGGAAAACA GCTTCTGAAC 960
CGAATCTGAA ATTACGGTCC AGGCTAAAGC AGAAAGTGGC CGAAAGACGG AGCAGCCCCC 1020
TGTTACGCAG GAAAGACGGG CCAGTGGTCA CTGCTCTAAA AAAGCGTCCG TTGGATGTCA 1080
CAGACTCCGC GTGCAGCAGC GCCCCAGGCT CCGGACCCAG CTCACCCAAC AACAGCTCCG 1140
GGAGCGTCAG CGCGGAGAAC GGTATCACGC CCACCGTCCC CAGCATCCCG GCGGAGACGA 1200
GTTTGGCGCA CAGACTTGTG GCGCGAGAAG GCTCGGCCGC TCCACTTCCC CTCTACACAT 1260
CGCCATCCCT GCCCAACATC ACACTGGGCC TGCCTGCCAC CGGCCCTTCC GCTGGCACAG 1320
CGGGCCAGCA GGACGCCGAG AGACTCGCCC TTCCCGCCCT CCAGCAGAGG CTCTCCCTTT 1380
TCCCCGGCAC CCACCTCACT CCCTACCTGA GCACCTCGCC CTTGGAGCGG GATGGAGGGG 1440
CAGCGCACAG CCCTCTTCTG CAGCACATGG TCTTACTGGA GCAGCCACCG GCACAAGCGC 1500
CCCTCGTCAC AGGCCTGGGA GCACTGCCCC TCCACGCACA GTCCTTGGTT GGTGCAGACC 1560
GGGTGTCCCC CTCCATCCAC AAGCTGCGGC AGCACCGCCC GCTGGGGCGG ACCCAGTCGG 1620
CCCCACTGCC CCAGAACGCC CAGGCTCTGC AGCACCTGGT CATCCAGCAG CAACATCAGC 1680
AGTTTCTGGA GAAACACAAG CAGCAGTTCC AGCAGCAGCA ACTGCACATG AACAAGATCA 1740
TCCCCAAGCC AAGCGAGCCA GCCCGGCAGC CAGAGAGCCA CCCGGAGGAG ACGGAGGAGG 1800
AGCTCCGTGA GCACCAGGCT CTGCTGGACG AGCCCTACCT GGACCGGCTG CCGGGGCAGA 1860
AGGAGGCGCA CGCACCGGCC GGCGTGCAGG TGAAGCAGGA GCCCATTGAA AGCGATGACG 1920
AAGAGGCGGA GCCCCCGCGG GAGGTGGAGC CCGGCCAACG CCAGCCCAGT GAGCAGGAGC 1980
TGCTCTTCAG ACAGCAAGCC CTCCTGCTGG AGCAGCAGCG GATCCACCAG CTGAGGAACT 2040
ACCAGGCATC CATGGAGGCC GCCGGCATCC CCGTGTCCTT TGGCGGCCAC AGGCCTCTGT 2100
CCCGGGCGCA GTCCTCACCC GCATCTGCCA CCTTCCCCGT GTCTGTGCAG GAGCCCCCCA 2160
CCAAGCCGAG GTTCACGACA GGCCTCGTGT ATGACACGCT GATGCTGAAG CACCAGTGCA 2220
CCTGCGGGAG CAGCAGCAGC CACCCCGAGC ACGCCGGGAG GATCCAGAGC ATCTGGTCCC 2280
GCCTGCAGGA GACAGGCCTC CGGGGCAAAT GTGAGTGCAT CCGCGGACGA AAGGCCACCC 2340
TGGAGGAGCT GCAGACGGTG CACTCGGAAG CCCACACCCT CCTGTACGGC ACGAACCCCC 2400
TCAACCGGCA GAAACTGGAC AGTAAGAAAC TTCTAGGCTC CCTGGCCTCC GTGTTCGTCC 2460
GGCTCCCCTG CGGTGGTGTT GGGGTGGACA GTGACACCAT ATGGAACGAG GTGCACTCGG 2520
CGGGGGCAGC CCGCCTGGCT GTGGGCTGTG TGGTAGAGCT GGTCTTCAAG GTGGCCACGG 2580
GGGAGCTGAA GAATGGCTTT GCTGTGGTCC GCCCCCCTGG ACACCATGCG GAGGAGAGCA 2640
CACCCGACGT GCACCATGGA AACGGGACCC AGGCTTTCTA CAGTGACCCC AGCGTCCTGT 2700
ACGTGTCCCT CCACCGCTAC GACGATGGGA ACTTCCCAGG CAGCGCTGAT GAGGTGGGCA 2760
CAGGGCCCGG CGTGGGTTTC AACGTCAACA TGGCTTTCAC CGGCGGCCTG GACCCCCCCA 2820
TGGGAGACGC TGAGTACTTG GCGGCCTTCA GAACGGTGGT CATGCCAATC GCCAGCGAGT 2880
TTGCCCCGGA CGTGGTGCTG GTGTCATCAG GCTTCGATGC TGTGGAGGGC CACCCCACAC 2940
CTCTCGGGGG CTACAACCTC TCCGCCAGAT GCTTCGGGTA CCTGACGAAG CAGCTGATGG 3000
GCCTGGCTGG CGGCCGGATC GTCCTGGCCC TCGAGGGAGG CCACGACCTG ACCGCCATTT 3060
GCGACGCCTC CGAAGCATGT GTTTCTGCCT TGCTGGGAAA TGAGCTTGAT CCTCTCCCAG 3120
AAAAGGTTTT ACAGCAAAGA CCCAATGCAA ACGCTGTCCG CTCCATGGAG AAAGTCATGG 3180
AGATCCACAG CAAGTACTGG CGCTGCCTCC AGCGCGCAAC CTCCACAGCG GGGCGTTCTC 3240
TGATCGAGGC TCAGACTTGC GAGAACGAAG AAGCCGAGAC GGTCACCGCC ATGGCCTCGC 3300
TGTCTGTGGG CGTGAAGCCC GCCGAAAAGA GACCAGACGA GGAGCCCATG GAAGAGGAGC 3360
CGCCCCTGTA G 3372
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 96 0.0 1820
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 96 0.0 1815
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 96 0.0 1805
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 94 0.0 1760
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 89 0.0 1720
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 88 0.0 1712
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 90 0.0 1709
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 90 0.0 1707
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 89 0.0 1689
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 90 0.0 1679
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 91 0.0 1672
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 91 0.0 1647
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 90 0.0 1638
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 91 0.0 1636
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 89 0.0 1632
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 87 0.0 1630
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 89 0.0 1628
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 89 0.0 1609
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 87 0.0 1602
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 86 0.0 1598
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 86 0.0 1572
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 79 0.0 1543
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 85 0.0 1535
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 86 0.0 1526
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 81 0.0 1517
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 83 0.0 1514
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 86 0.0 1483
WERAM-Dio-0038 ENSDORP00000004330.1 Dipodomys ordii 81 0.0 1440
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 86 0.0 1419
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 77 0.0 1401
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 78 0.0 1382
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 81 0.0 1373
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 75 0.0 1347
WERAM-Orn-0049 ENSONIP00000005635.1 Oreochromis niloticus 69 0.0 1182
WERAM-Tar-0063 ENSTRUP00000012899.1 Takifugu rubripes 68 0.0 1169
WERAM-Ten-0103 ENSTNIP00000011743.1 Tetraodon nigroviridis 67 0.0 1166
WERAM-Gaa-0020 ENSGACP00000002894.1 Gasterosteus aculeatus 67 0.0 1148
WERAM-Xim-0022 ENSXMAP00000002092.1 Xiphophorus maculatus 66 0.0 1145
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 70 0.0 1144
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 94 0.0 1139
WERAM-Pof-0029 ENSPFOP00000001978.1 Poecilia formosa 66 0.0 1137
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 93 0.0 1114
WERAM-Tas-0071 ENSTSYP00000007103.1 Tarsius syrichta 76 0.0 1078
WERAM-Ptv-0078 ENSPVAP00000007254.1 Pteropus vampyrus 74 0.0 974
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 79 0.0 907
WERAM-Sah-0044 ENSSHAP00000005074.1 Sarcophilus harrisii 63 0.0 871
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 53 0.0 865
WERAM-Orc-0142 ENSOCUP00000012429.3 Oryctolagus cuniculus 53 0.0 859
WERAM-Eqc-0153 ENSECAP00000016533.1 Equus caballus 53 0.0 859
WERAM-Mod-0016 ENSMODP00000001749.3 Monodelphis domestica 54 0.0 858
WERAM-Mae-0145 ENSMEUP00000015025.1 Macropus eugenii 51 0.0 762
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 48 0.0 742
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 51 0.0 701
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 72 0.0 690
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 64 0.0 656
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 70 0.0 654
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 66 2e-173 607
WERAM-Prc-0004 ENSPCAP00000000473.1 Procavia capensis 47 5e-173 606
WERAM-Mim-0087 ENSMICP00000008193.1 Microcebus murinus 45 4e-170 596
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 61 4e-158 556
WERAM-Ect-0068 ENSETEP00000007698.1 Echinops telfairi 42 3e-157 553
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 52 6e-131 466
WERAM-Tub-0129 ENSTBEP00000014362.1 Tupaia belangeri 51 4e-123 440
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 47 3e-108 390
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 46 2e-106 385
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 44 3e-97 354
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 48 4e-70 264
Created Date 25-Jun-2016