WERAM Information


Tag Content
WERAM ID WERAM-Mod-0086
Ensembl Protein ID ENSMODP00000013319.2
Gene Name HDAC3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMODG00000010634.2 ENSMODT00000013564.2 ENSMODP00000013319.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 7.20e-170 564.6 4 393
Organism Monodelphis domestica
Domain Profile
  HDAC Class-I

           class-1.txt   2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90 
+vay+yd+dvg++hyg++hpmkp+rl+lth+Lvl+ygl+kk+ ++kp +as++++++fhse+yi+fl++v+p+n++ ++k+l+ fnvg+
ENSMODP00000013319.2 4 TVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGD 92
79*************************************************************************************** PP
class-1.txt 91 dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeaf 179
dcPvf glfe+c+ +tGasl++a++Ln+k +diainwaGGlhhakk easGfcyvnDiv++ilellk+h+rvlyidid+hhGDgv+eaf
ENSMODP00000013319.2 93 DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAF 181
***************************************************************************************** PP
class-1.txt 180 yttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefn 268
y tdrvmtvsfhkyg++ffPgtGd+++vgae+g+yy++nvPl+dgidD+sy+++f++vi++v+++++P+++vlqcGaDsl +Drlg+fn
ENSMODP00000013319.2 182 YLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFN 270
***************************************************************************************** PP
class-1.txt 269 lsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
lsi+gh+ecv++vksfn+pllvlGGGGYt+rnvaRcwtyet++++
ENSMODP00000013319.2 271 LSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLV 315
******************************************986 PP
class-1.txt 228 esyekifksviskv.ieafePeavvlqcGaDslagDrl 264
+++ +i +++ +++ + + P++ + ++ +D l+ Dr
ENSMODP00000013319.2 356 QYLDQIRQTIFENLkMLNHAPSVQIHDVPSDLLTYDRT 393
66788888888887356799999999999999999996 PP

Protein Sequence
(Fasta)
MSKTVAYFYD PDVGNFHYGA GHPMKPHRLA LTHSLVLHYG LYKKMIVFKP YQASQHDMCR 60
FHSEDYIDFL QRVSPTNMQG FTKSLNAFNV GDDCPVFPGL FEFCSRYTGA SLQGATQLNN 120
KICDIAINWA GGLHHAKKFE ASGFCYVNDI VIGILELLKY HPRVLYIDID IHHGDGVQEA 180
FYLTDRVMTV SFHKYGNYFF PGTGDMYEVG AESGRYYCLN VPLRDGIDDQ SYKHLFQPVI 240
NQVVDFYQPT CIVLQCGADS LGCDRLGCFN LSIRGHGECV EYVKSFNIPL LVLGGGGYTV 300
RNVARCWTYE TSLLVEEAIS EELPYSGITE FSKYFAPDFT LHPDVSTRIE NQNSRQYLDQ 360
IRQTIFENLK MLNHAPSVQI HDVPSDLLTY DRTDEADAEE RGPEENYTRP EASNEFYDGD 420
HDNDKESDVE I 431
Nucleotide Sequence
(Fasta)
ATGTCCAAGA CGGTGGCCTA TTTCTATGAC CCGGATGTGG GGAACTTCCA CTACGGGGCC 60
GGTCACCCCA TGAAACCCCA TCGTCTGGCG CTCACTCATA GCCTGGTGCT ACACTATGGA 120
CTCTACAAGA AGATGATCGT CTTCAAGCCA TACCAAGCAT CTCAGCATGA TATGTGCCGT 180
TTCCATTCAG AGGATTATAT TGACTTCCTG CAGCGGGTCA GCCCAACCAA CATGCAGGGC 240
TTTACTAAGA GTCTCAATGC TTTCAATGTA GGGGATGATT GCCCTGTGTT CCCAGGCCTC 300
TTTGAGTTTT GTTCCCGTTA CACAGGTGCT TCCCTGCAGG GAGCTACACA ATTGAACAAC 360
AAGATCTGTG ATATTGCCAT TAACTGGGCT GGAGGGCTAC ACCATGCTAA GAAATTTGAG 420
GCCTCAGGTT TCTGCTATGT CAATGACATT GTGATCGGCA TCCTGGAGCT ACTGAAGTAT 480
CACCCTCGTG TATTGTACAT TGATATTGAT ATCCACCATG GGGATGGTGT ACAGGAAGCC 540
TTCTATCTCA CTGACCGAGT CATGACTGTC TCTTTCCATA AATATGGCAA TTACTTCTTT 600
CCTGGAACAG GTGATATGTA TGAAGTTGGA GCAGAAAGTG GACGCTACTA CTGTCTCAAC 660
GTCCCCCTTC GGGATGGCAT CGATGATCAG AGTTACAAGC ACCTCTTCCA GCCTGTAATC 720
AACCAAGTGG TGGATTTTTA CCAACCAACA TGCATTGTAC TACAGTGTGG AGCTGATTCC 780
CTGGGTTGTG ATCGGCTGGG TTGCTTCAAC CTCAGCATCC GAGGTCATGG GGAGTGTGTT 840
GAATATGTGA AGAGCTTTAA CATCCCATTG CTGGTACTGG GTGGTGGTGG TTATACTGTT 900
CGAAATGTTG CCCGGTGCTG GACATATGAG ACATCACTGT TGGTAGAAGA AGCTATCAGT 960
GAGGAGCTAC CATATAGTGG CATAACTGAG TTCTCTAAAT ACTTTGCCCC AGATTTCACA 1020
CTTCATCCAG ATGTCAGCAC TCGAATTGAA AATCAGAATT CACGACAGTA CCTGGATCAA 1080
ATCCGCCAGA CGATCTTTGA GAATCTGAAG ATGTTGAATC ATGCACCCAG TGTCCAGATC 1140
CATGATGTAC CATCTGATCT GCTGACCTAT GACAGAACTG ATGAAGCTGA TGCTGAAGAA 1200
AGGGGCCCTG AGGAAAACTA CACCAGACCA GAAGCTTCCA ATGAGTTCTA TGATGGAGAC 1260
CATGACAACG ATAAAGAAAG TGACGTAGAG ATTTGAAGCC TGG 1304
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sah-0124 ENSSHAP00000012846.1 Sarcophilus harrisii 98 0.0 883
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 98 0.0 880
WERAM-Sus-0109 ENSSSCP00000015310.2 Sus scrofa 98 0.0 879
WERAM-Poa-0142 ENSPPYP00000017772.1 Pongo abelii 98 0.0 879
WERAM-Paa-0044 ENSPANP00000001672.1 Papio anubis 98 0.0 879
WERAM-Pat-0142 ENSPTRP00000029652.3 Pan troglodytes 98 0.0 879
WERAM-Orc-0086 ENSOCUP00000007738.2 Oryctolagus cuniculus 98 0.0 879
WERAM-Ocp-0150 ENSOPRP00000015465.1 Ochotona princeps 98 0.0 879
WERAM-Myl-0096 ENSMLUP00000007910.2 Myotis lucifugus 98 0.0 879
WERAM-Ict-0140 ENSSTOP00000014542.2 Ictidomys tridecemlineatus 98 0.0 879
WERAM-Hos-0198 ENSP00000302967.3 Homo sapiens 98 0.0 879
WERAM-Gog-0182 ENSGGOP00000015976.2 Gorilla gorilla 98 0.0 879
WERAM-Cap-0155 ENSCPOP00000012861.2 Cavia porcellus 98 0.0 879
WERAM-Caf-0075 ENSCAFP00000030390.2 Canis familiaris 98 0.0 879
WERAM-Caj-0192 ENSCJAP00000033421.2 Callithrix jacchus 98 0.0 879
WERAM-Aim-0114 ENSAMEP00000011012.1 Ailuropoda melanoleuca 98 0.0 879
WERAM-Mum-0059 ENSMUSP00000037981.7 Mus musculus 97 0.0 877
WERAM-Eqc-0167 ENSECAP00000018023.1 Equus caballus 97 0.0 875
WERAM-Mup-0085 ENSMPUP00000008127.1 Mustela putorius furo 97 0.0 874
WERAM-Ova-0007 ENSOARP00000000868.1 Ovis aries 97 0.0 873
WERAM-Dan-0065 ENSDNOP00000006447.2 Dasypus novemcinctus 97 0.0 869
WERAM-Fec-0077 ENSFCAP00000006409.3 Felis catus 97 0.0 868
WERAM-Otg-0013 ENSOGAP00000000543.2 Otolemur garnettii 96 0.0 867
WERAM-Meg-0022 ENSMGAP00000001598.1 Meleagris gallopavo 96 0.0 867
WERAM-Gaga-0024 ENSGALP00000004141.3 Gallus gallus 96 0.0 867
WERAM-Anc-0124 ENSACAP00000011701.2 Anolis carolinensis 95 0.0 860
WERAM-Nol-0100 ENSNLEP00000011707.1 Nomascus leucogenys 96 0.0 858
WERAM-Tag-0179 ENSTGUP00000015405.1 Taeniopygia guttata 95 0.0 853
WERAM-Xet-0020 ENSXETP00000005840.3 Xenopus tropicalis 94 0.0 850
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 94 0.0 850
WERAM-Leo-0119 ENSLOCP00000014828.1 Lepisosteus oculatus 92 0.0 833
WERAM-Orn-0192 ENSONIP00000019932.1 Oreochromis niloticus 91 0.0 832
WERAM-Dar-0082 ENSDARP00000054625.5 Danio rerio 91 0.0 831
WERAM-Pof-0043 ENSPFOP00000003698.2 Poecilia formosa 91 0.0 830
WERAM-Orla-0093 ENSORLP00000011294.1 Oryzias latipes 91 0.0 830
WERAM-Xim-0005 ENSXMAP00000000863.1 Xiphophorus maculatus 90 0.0 829
WERAM-Fia-0044 ENSFALP00000003005.1 Ficedula albicollis 96 0.0 825
WERAM-Ten-0120 ENSTNIP00000013021.1 Tetraodon nigroviridis 90 0.0 822
WERAM-Gaa-0203 ENSGACP00000024795.1 Gasterosteus aculeatus 90 0.0 819
WERAM-Gam-0015 ENSGMOP00000001496.1 Gadus morhua 90 0.0 818
WERAM-Pes-0041 ENSPSIP00000006305.1 Pelodiscus sinensis 96 0.0 816
WERAM-Tut-0154 ENSTTRP00000013027.1 Tursiops truncatus 92 0.0 816
WERAM-Ran-0128 ENSRNOP00000071791.1 Rattus norvegicus 90 0.0 815
WERAM-Ptv-0171 ENSPVAP00000014750.1 Pteropus vampyrus 91 0.0 808
WERAM-Mim-0152 ENSMICP00000015894.1 Microcebus murinus 91 0.0 802
WERAM-Chh-0070 ENSCHOP00000007333.1 Choloepus hoffmanni 97 0.0 774
WERAM-Anp-0042 ENSAPLP00000004660.1 Anas platyrhynchos 96 0.0 770
WERAM-Prc-0116 ENSPCAP00000010084.1 Procavia capensis 87 0.0 761
WERAM-Mam-0105 ENSMMUP00000016525.1 Macaca mulatta 98 0.0 759
WERAM-Pem-0092 ENSPMAP00000009670.1 Petromyzon marinus 84 0.0 748
WERAM-Loa-0085 ENSLAFP00000006680.3 Loxodonta africana 97 0.0 712
WERAM-Tar-0077 ENSTRUP00000015206.1 Takifugu rubripes 86 0.0 704
WERAM-Tas-0075 ENSTSYP00000007464.1 Tarsius syrichta 85 0.0 702
WERAM-Tub-0054 ENSTBEP00000006507.1 Tupaia belangeri 97 0.0 681
WERAM-Cii-0013 ENSCINP00000004801.3 Ciona intestinalis 73 0.0 677
WERAM-Cis-0077 ENSCSAVP00000016740.1 Ciona savignyi 71 0.0 657
WERAM-Drm-0025 FBpp0078414 Drosophila melanogaster 65 8e-174 607
WERAM-Dio-0123 ENSDORP00000011840.1 Dipodomys ordii 82 1e-153 540
WERAM-Coi-0024 EAS33504 Coccidioides immitis 62 1e-153 540
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 61 2e-153 539
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 61 1e-152 536
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 62 2e-152 536
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 60 6e-152 534
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 61 1e-151 533
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 61 6e-151 531
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 62 7e-151 531
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 62 5e-150 528
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 63 7e-149 524
WERAM-Caa-0018 KGT69072 Candida albicans 57 8e-149 524
WERAM-Kop-0004 CAY67954 Komagataella pastoris 58 2e-148 523
WERAM-Glm-0130 GLYMA11G19290.1 Glycine max 57 2e-148 522
WERAM-Asg-0034 AAS54885 Ashbya gossypii 59 4e-148 521
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 62 6e-148 521
WERAM-Art-0082 AT3G44680.1 Arabidopsis thaliana 57 6e-148 521
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 57 1e-147 520
WERAM-Ved-0020 EGY15146 Verticillium dahliae 61 1e-147 520
WERAM-Bro-0059 Bo3g120880.1 Brassica oleracea 57 1e-147 520
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 61 4e-147 518
WERAM-Brr-0098 Bra019424.1-P Brassica rapa 57 4e-147 518
WERAM-Met-0097 AES88434 Medicago truncatula 57 4e-147 518
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 59 1e-146 516
WERAM-Thc-0114 EOY33523 Theobroma cacao 57 2e-146 516
WERAM-Cag-0003 CAG57932 Candida glabrata 59 2e-146 516
WERAM-Org-0044 ORGLA04G0087200.1 Oryza glaberrima 57 3e-146 515
WERAM-Trv-0003 EHK19072 Trichoderma virens 56 3e-146 515
WERAM-Pot-0020 POPTR_0001s46430.1 Populus trichocarpa 57 4e-146 515
WERAM-Orni-0039 ONIVA04G09660.1 Oryza nivara 57 4e-146 514
WERAM-Ori-0051 BGIOSGA016344-PA Oryza indica 57 4e-146 514
WERAM-Orgl-0043 OGLUM04G11380.3 Oryza glumaepatula 57 4e-146 514
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 58 6e-146 514
WERAM-Orbr-0052 OB04G18820.1 Oryza brachyantha 57 2e-145 513
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 59 9e-145 510
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 58 1e-144 510
WERAM-Amt-0048 ERN13133 Amborella trichopoda 56 1e-144 509
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 58 2e-144 509
WERAM-Orb-0042 OBART04G11700.1 Oryza barthii 57 2e-144 509
WERAM-Orr-0042 ORUFI04G12890.1 Oryza rufipogon 57 3e-144 509
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 58 3e-144 509
WERAM-Trr-0017 EGR48353 Trichoderma reesei 59 4e-144 508
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 61 7e-144 507
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 56 8e-144 507
WERAM-Arl-0024 fgenesh1_pg.C_scaffold_5000937 Arabidopsis lyrata 55 1e-143 506
WERAM-Mua-0089 GSMUA_Achr6P17260_001 Musa acuminata 55 2e-143 506
WERAM-Orp-0042 OPUNC04G09700.1 Oryza punctata 56 3e-143 505
WERAM-Viv-0093 VIT_15s0021g00610.t01 Vitis vinifera 57 3e-143 505
WERAM-Sob-0086 Sb06g015420.1 Sorghum bicolor 59 6e-143 504
WERAM-Prp-0063 EMJ06433 Prunus persica 57 8e-143 504
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 57 1e-142 503
WERAM-Sol-0138 Solyc11g067020.1.1 Solanum lycopersicum 57 2e-142 503
WERAM-Chr-0011 EDP01149 Chlamydomonas reinhardtii 56 2e-142 503
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 59 3e-142 502
WERAM-Sei-0035 Si010167m Setaria italica 58 1e-141 500
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 55 2e-141 499
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 53 2e-141 499
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 58 3e-141 499
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 61 6e-141 498
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 59 1e-140 496
WERAM-Soa-0041 ENSSARP00000003871.1 Sorex araneus 63 1e-140 496
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 59 4e-140 495
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 59 6e-140 494
WERAM-Zem-0071 GRMZM2G119703_P01 Zea mays 59 8e-140 494
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 58 2e-139 493
Created Date 25-Jun-2016